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EGASP: the human ENCODE Genome Annotation Assessment Project.
Guigó R, Flicek P, Abril JF, Reymond A, Lagarde J, Denoeud F, Antonarakis S, Ashburner M, Bajic VB, Birney E, Castelo R, Eyras E, Ucla C, Gingeras TR, Harrow J, Hubbard T, Lewis SE, Reese MG
Genome Biol 2006, 7 Suppl 1:S2.1-31
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AUGUSTUS at EGASP: using EST, protein and genomic alignments for improved gene prediction in the human genome.
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Performance assessment of promoter predictions on ENCODE regions in the EGASP experiment.
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Pseudogenes in the ENCODE regions: consensus annotation, analysis of transcription, and evolution.
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