Log on / register
Feedback | Support | My details
A strategy for extracting and analyzing large-scale quantitative epistatic interaction data.
Collins SR, Schuldiner M, Krogan NJ, Weissman JS
Genome Biol 2006, 7:R63
[Full text] [PubMed] [Related articles] [Cited on BioMed Central]


printer friendly 
to  [Help]

PubMed Central articles that cite the above article:

1.
Backup without redundancy: genetic interactions reveal the cost of duplicate gene loss.
Ihmels J, Collins SR, Schuldiner M, Krogan NJ, Weissman JS
Mol Syst Biol 2007, 3:86
[PubMed Central] [PubMed] [Related articles]

2.
CCR4/NOT complex associates with the proteasome and regulates histone methylation.
Laribee RN, Shibata Y, Mersman DP, Collins SR, Kemmeren P, Roguev A, Weissman JS, Briggs SD, Krogan NJ, Strahl BD
Proc Natl Acad Sci U S A 2007 Apr 3, 104:5836-41
[PubMed Central] [PubMed] [Related articles]

3.
Buffering of deoxyribonucleotide pool homeostasis by threonine metabolism.
Hartman JL
Proc Natl Acad Sci U S A 2007 Jul 10, 104:11700-5
[PubMed Central] [PubMed] [Related articles]

4.
Identification of yeast proteins necessary for cell-surface function of a potassium channel.
Haass FA, Jonikas M, Walter P, Weissman JS, Jan YN, Jan LY, Schuldiner M
Proc Natl Acad Sci U S A 2007 Nov 13, 104:18079-84
[PubMed Central] [PubMed] [Related articles]

5.
Functional maps of protein complexes from quantitative genetic interaction data.
Bandyopadhyay S, Kelley R, Krogan NJ, Ideker T
PLoS Comput Biol 2008 Apr, 4:e1000065
[PubMed Central] [PubMed] [Related articles]

6.
eQED: an efficient method for interpreting eQTL associations using protein networks.
Suthram S, Beyer A, Karp RM, Eldar Y, Ideker T
Mol Syst Biol 2008, 4:162
[PubMed Central] [PubMed] [Related articles]

7.
Interactions between stressful environment and gene deletions alleviate the expected average loss of fitness in yeast.
Jasnos L, Tomala K, Paczesniak D, Korona R
Genetics 2008 Apr, 178:2105-11
[PubMed Central] [PubMed] [Related articles]

8.
From E-MAPs to module maps: dissecting quantitative genetic interactions using physical interactions.
Ulitsky I, Shlomi T, Kupiec M, Shamir R
Mol Syst Biol 2008, 4:209
[PubMed Central] [PubMed] [Related articles]

9.
Predicting quantitative genetic interactions by means of sequential matrix approximation.
Järvinen AP, Hiissa J, Elo LL, Aittokallio T
PLoS One 2008, 3:e3284
[PubMed Central] [PubMed] [Related articles]

10.
Cost-effective strategies for completing the interactome.
Schwartz AS, Yu J, Gardenour KR, Finley RL, Ideker T
Nat Methods 2009 Jan, 6:55-61
[PubMed Central] [PubMed] [Related articles]

11.
Stringent mating-type-regulated auxotrophy increases the accuracy of systematic genetic interaction screens with Saccharomyces cerevisiae mutant arrays.
Singh I, Pass R, Togay SO, Rodgers JW, Hartman JL
Genetics 2009 Jan, 181:289-300
[PubMed Central] [PubMed] [Related articles]

12.
A complex-based reconstruction of the Saccharomyces cerevisiae interactome.
Wang H, Kakaradov B, Collins SR, Karotki L, Fiedler D, Shales M, Shokat KM, Walther TC, Krogan NJ, Koller D
Mol Cell Proteomics 2009 Jun, 8:1361-81
[PubMed Central] [PubMed] [Related articles]

13.
Evolution of phosphoregulation: comparison of phosphorylation patterns across yeast species.
Beltrao P, Trinidad JC, Fiedler D, Roguev A, Lim WA, Shokat KM, Burlingame AL, Krogan NJ
PLoS Biol 2009 Jun 16, 7:e1000134
[PubMed Central] [PubMed] [Related articles]

14.
High-throughput, quantitative analyses of genetic interactions in E. coli.
Typas A, Nichols RJ, Siegele DA, Shales M, Collins SR, Lim B, Braberg H, Yamamoto N, Takeuchi R, Wanner BL, Mori H, Weissman JS, Krogan NJ, Gross CA
Nat Methods 2008 Sep, 5:781-7
[PubMed Central] [PubMed] [Related articles]

15.
Systematic pathway analysis using high-resolution fitness profiling of combinatorial gene deletions.
St Onge RP, Mani R, Oh J, Proctor M, Fung E, Davis RW, Nislow C, Roth FP, Giaever G
Nat Genet 2007 Feb, 39:199-206
[PubMed Central] [PubMed] [Related articles]

16.
A comprehensive framework of E2-RING E3 interactions of the human ubiquitin-proteasome system.
van Wijk SJ, de Vries SJ, Kemmeren P, Huang A, Boelens R, Bonvin AM, Timmers HT
Mol Syst Biol 2009, 5:295
[PubMed Central] [PubMed] [Related articles]

17.
Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast.
Roguev A, Bandyopadhyay S, Zofall M, Zhang K, Fischer T, Collins SR, Qu H, Shales M, Park HO, Hayles J, Hoe KL, Kim DU, Ideker T, Grewal SI, Weissman JS, Krogan NJ
Science 2008 Oct 17, 322:405-10
[PubMed Central] [PubMed] [Related articles]

18.
Reverse engineering a signaling network using alternative inputs.
Tanaka H, Yi TM
PLoS One 2009, 4:e7622
[PubMed Central] [PubMed] [Related articles]


This article is also cited by 1 article in BioMed Central


You can also check ISI Web of Science for additional citations (subscription required)
printer friendly 
to  [Help]

© 1999-2009 BioMed Central Ltd unless otherwise stated. Part of Springer Science+Business Media.