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Detection of non-coding RNAs on the basis of predicted secondary structure formation free energy change.
Uzilov AV, Keegan JM, Mathews DH
BMC Bioinformatics
2006,
7
:173
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PubMed Central articles that cite the above article:
1.
Inferring noncoding RNA families and classes by means of genome-scale structure-based clustering.
Will S, Reiche K, Hofacker IL, Stadler PF, Backofen R
PLoS Comput Biol
2007 Apr 13,
3
:e65
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*** Unable to retrieve article 17432929 ***
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Structured RNAs in the ENCODE selected regions of the human genome.
Washietl S, Pedersen JS, Korbel JO, Stocsits C, Gruber AR, Hackermüller J, Hertel J, Lindemeyer M, Reiche K, Tanzer A, Ucla C, Wyss C, Antonarakis SE, Denoeud F, Lagarde J, Drenkow J, Kapranov P, Gingeras TR, Guigó R, Snyder M, Gerstein MB, Reymond A, Hofacker IL, Stadler PF
Genome Res
2007 Jun,
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:852-64
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The RNAz web server: prediction of thermodynamically stable and evolutionarily conserved RNA structures.
Gruber AR, Neuböck R, Hofacker IL, Washietl S
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2007 Jul,
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PARTS: probabilistic alignment for RNA joinT secondary structure prediction.
Harmanci AO, Sharma G, Mathews DH
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2008 Apr,
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Discovering cis-regulatory RNAs in Shewanella genomes by Support Vector Machines.
Xu X, Ji Y, Stormo GD
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2009 Apr,
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