Log on / register
Feedback | Support | My details
An ontology for cell types.
Bard J, Rhee SY, Ashburner M
Genome Biol 2005, 6:R21
[Full text] [PubMed] [Related articles] [Cited on BioMed Central]


printer friendly 
to  [Help]

PubMed Central articles that cite the above article:

1.
MAO: a Multiple Alignment Ontology for nucleic acid and protein sequences.
Thompson JD, Holbrook SR, Katoh K, Koehl P, Moras D, Westhof E, Poch O
Nucleic Acids Res 2005, 33:4164-71
[PubMed Central] [PubMed] [Related articles]

2.
FlyBase: anatomical data, images and queries.
Grumbling G, Strelets V
Nucleic Acids Res 2006 Jan 1, 34:D484-8
[PubMed Central] [PubMed] [Related articles]

3.
BodyMap-Xs: anatomical breakdown of 17 million animal ESTs for cross-species comparison of gene expression.
Ogasawara O, Otsuji M, Watanabe K, Iizuka T, Tamura T, Hishiki T, Kawamoto S, Okubo K
Nucleic Acids Res 2006 Jan 1, 34:D628-31
[PubMed Central] [PubMed] [Related articles]

4.
Protein family expansions and biological complexity.
Vogel C, Chothia C
PLoS Comput Biol 2006 May, 2:e48
[PubMed Central] [PubMed] [Related articles]

5.
The plant structure ontology, a unified vocabulary of anatomy and morphology of a flowering plant.
Ilic K, Kellogg EA, Jaiswal P, Zapata F, Stevens PF, Vincent LP, Avraham S, Reiser L, Pujar A, Sachs MM, Whitman NT, McCouch SR, Schaeffer ML, Ware DH, Stein LD, Rhee SY
Plant Physiol 2007 Feb, 143:587-99
[PubMed Central] [PubMed] [Related articles]

6.
Evaluation of lexical methods for detecting relationships between concepts from multiple ontologies.
Johnson HL, Cohen KB, Baumgartner WA, Lu Z, Bada M, Kester T, Kim H, Hunter L
Pac Symp Biocomput 2006, :28-39
[PubMed Central] [PubMed] [Related articles]

7.
Bio-ontologies: current trends and future directions.
Bodenreider O, Stevens R
Brief Bioinform 2006 Sep, 7:256-74
[PubMed Central] [PubMed] [Related articles]

8.
Systems developmental biology: the use of ontologies in annotating models and in identifying gene function within and across species.
Bard J
Mamm Genome 2007 Jul, 18:402-11
[PubMed Central] [PubMed] [Related articles]

9.
Enrichment of OBO ontologies.
Bada M, Hunter L
J Biomed Inform 2007 Jun, 40:300-15
[PubMed Central] [PubMed] [Related articles]

10.
The neuron classification problem.
Bota M, Swanson LW
Brain Res Rev 2007 Nov, 56:79-88
[PubMed Central] [PubMed] [Related articles]

11.
The Plant Ontology Database: a community resource for plant structure and developmental stages controlled vocabulary and annotations.
Avraham S, Tung CW, Ilic K, Jaiswal P, Kellogg EA, McCouch S, Pujar A, Reiser L, Rhee SY, Sachs MM, Schaeffer M, Stein L, Stevens P, Vincent L, Zapata F, Ware D
Nucleic Acids Res 2008 Jan, 36:D449-54
[PubMed Central] [PubMed] [Related articles]

12.
PRIDE: new developments and new datasets.
Jones P, Côté RG, Cho SY, Klie S, Martens L, Quinn AF, Thorneycroft D, Hermjakob H
Nucleic Acids Res 2008 Jan, 36:D878-83
[PubMed Central] [PubMed] [Related articles]

13.
Automated acquisition of disease drug knowledge from biomedical and clinical documents: an initial study.
Chen ES, Hripcsak G, Xu H, Markatou M, Friedman C
J Am Med Inform Assoc 2008 Jan-Feb, 15:87-98
[PubMed Central] [PubMed] [Related articles]

14.
The cell centered database project: an update on building community resources for managing and sharing 3D imaging data.
Martone ME, Tran J, Wong WW, Sargis J, Fong L, Larson S, Lamont SP, Gupta A, Ellisman MH
J Struct Biol 2008 Mar, 161:220-31
[PubMed Central] [PubMed] [Related articles]

15.
Identification of OBO nonalignments and its implications for OBO enrichment.
Bada M, Hunter L
Bioinformatics 2008 Jun 15, 24:1448-55
[PubMed Central] [PubMed] [Related articles]

16.
BAMS Neuroanatomical Ontology: Design and Implementation.
Bota M, Swanson LW
Front Neuroinformatics 2008, 2:2
[PubMed Central] [PubMed] [Related articles]

17.
A formal ontology of subcellular neuroanatomy.
Larson SD, Fong LL, Gupta A, Condit C, Bug WJ, Martone ME
Front Neuroinformatics 2007, 1:3
[PubMed Central] [PubMed] [Related articles]

18.
Computational approaches to phenotyping: high-throughput phenomics.
Lussier YA, Liu Y
Proc Am Thorac Soc 2007 Jan, 4:18-25
[PubMed Central] [PubMed] [Related articles]

19.
NeuroMorpho.Org implementation of digital neuroscience: dense coverage and integration with the NIF.
Halavi M, Polavaram S, Donohue DE, Hamilton G, Hoyt J, Smith KP, Ascoli GA
Neuroinformatics 2008 Sep, 6:241-52
[PubMed Central] [PubMed] [Related articles]

20.
ArrayExpress update--from an archive of functional genomics experiments to the atlas of gene expression.
Parkinson H, Kapushesky M, Kolesnikov N, Rustici G, Shojatalab M, Abeygunawardena N, Berube H, Dylag M, Emam I, Farne A, Holloway E, Lukk M, Malone J, Mani R, Pilicheva E, Rayner TF, Rezwan F, Sharma A, Williams E, Bradley XZ, Adamusiak T, Brandizi M, Burdett T, Coulson R, Krestyaninova M, Kurnosov P, Maguire E, Neogi SG, Rocca-Serra P, Sansone SA, Sklyar N, Zhao M, Sarkans U, Brazma A
Nucleic Acids Res 2009 Jan, 37:D868-72
[PubMed Central] [PubMed] [Related articles]

21.
MirZ: an integrated microRNA expression atlas and target prediction resource.
Hausser J, Berninger P, Rodak C, Jantscher Y, Wirth S, Zavolan M
Nucleic Acids Res 2009 Jul 1, 37:W266-72
[PubMed Central] [PubMed] [Related articles]


This article is also cited by 14 articles in BioMed Central


You can also check ISI Web of Science for additional citations (subscription required)
printer friendly 
to  [Help]

© 1999-2009 BioMed Central Ltd unless otherwise stated. Part of Springer Science+Business Media.