BioMed Central | Articles which cite: Fast and systematic genome-wide discovery of conserved regulatory elements using a non-alignment based approach.

Log on / register
Feedback | Support | My details

home journals A-Z subject areas advanced search authors reviewers libraries jobs about my BioMed Central

Fast and systematic genome-wide discovery of conserved regulatory elements using a non-alignment based approach.
Elemento O, Tavazoie S
Genome Biol 2005, 6:R18
[Full text] [PubMed] [Related articles] [Cited on BioMed Central]

printer friendly

to [Help]

PubMed Central articles that cite the above article:

1.	Revealing posttranscriptional regulatory elements through network-level conservation. Chan CS, Elemento O, Tavazoie S PLoS Comput Biol 2005 Dec, 1:e69 [PubMed Central] [PubMed] [Related articles]
2.	cisRED: a database system for genome-scale computational discovery of regulatory elements. Robertson G, Bilenky M, Lin K, He A, Yuen W, Dagpinar M, Varhol R, Teague K, Griffith OL, Zhang X, Pan Y, Hassel M, Sleumer MC, Pan W, Pleasance ED, Chuang M, Hao H, Li YY, Robertson N, Fjell C, Li B, Montgomery SB, Astakhova T, Zhou J, Sander J, Siddiqui AS, Jones SJ Nucleic Acids Res 2006 Jan 1, 34:D68-73 [PubMed Central] [PubMed] [Related articles]
3.	Practical strategies for discovering regulatory DNA sequence motifs. MacIsaac KD, Fraenkel E PLoS Comput Biol 2006 Apr, 2:e36 [PubMed Central] [PubMed] [Related articles]
4.	Identification of degenerate motifs using position restricted selection and hybrid ranking combination. Peng CH, Hsu JT, Chung YS, Lin YJ, Chow WY, Hsu DF, Tang CY Nucleic Acids Res 2006, 34:6379-91 [PubMed Central] [PubMed] [Related articles]
5.	Large-scale discovery of promoter motifs in Drosophila melanogaster. Down TA, Bergman CM, Su J, Hubbard TJ PLoS Comput Biol 2007 Jan 19, 3:e7 [PubMed Central] [PubMed] [Related articles]
6.	* Unable to retrieve article 17238282 * [PubMed Central] [PubMed] [Related articles]
7.	hDREF regulates cell proliferation and expression of ribosomal protein genes. Yamashita D, Sano Y, Adachi Y, Okamoto Y, Osada H, Takahashi T, Yamaguchi T, Osumi T, Hirose F Mol Cell Biol 2007 Mar, 27:2003-13 [PubMed Central] [PubMed] [Related articles]
8.	* Unable to retrieve article 17130169 * [PubMed Central] [PubMed] [Related articles]
9.	Regulatory circuit of human microRNA biogenesis. Lee J, Li Z, Brower-Sinning R, John B PLoS Comput Biol 2007 Apr 20, 3:e67 [PubMed Central] [PubMed] [Related articles]
10.	Systematic discovery of regulatory motifs in conserved regions of the human genome, including thousands of CTCF insulator sites. Xie X, Mikkelsen TS, Gnirke A, Lindblad-Toh K, Kellis M, Lander ES Proc Natl Acad Sci U S A 2007 Apr 24, 104:7145-50 [PubMed Central] [PubMed] [Related articles]
11.	* Unable to retrieve article 17447837 * [PubMed Central] [PubMed] [Related articles]
12.	Regulation of rRNA synthesis by TATA-binding protein-associated factor Mot1. Dasgupta A, Sprouse RO, French S, Aprikian P, Hontz R, Juedes SA, Smith JS, Beyer AL, Auble DT Mol Cell Biol 2007 Apr, 27:2886-96 [PubMed Central] [PubMed] [Related articles]
13.	Genome dynamics of short oligonucleotides: the example of bacterial DNA uptake enhancing sequences. Bakkali M PLoS ONE 2007, 2:e741 [PubMed Central] [PubMed] [Related articles]
14.	Histone variant H2A.Z marks the 5' ends of both active and inactive genes in euchromatin. Raisner RM, Hartley PD, Meneghini MD, Bao MZ, Liu CL, Schreiber SL, Rando OJ, Madhani HD Cell 2005 Oct 21, 123:233-48 [PubMed Central] [PubMed] [Related articles]
15.	Discovering gapped binding sites of yeast transcription factors. Chen CY, Tsai HK, Hsu CM, May Chen MJ, Hung HG, Huang GT, Li WH Proc Natl Acad Sci U S A 2008 Feb 19, 105:2527-32 [PubMed Central] [PubMed] [Related articles]
16.	H2A.Z-Mediated Genome-Wide Chromatin Specialization. Eirín-López J, Ausió J Curr Genomics 2007 Mar, 8:59-66 [PubMed Central] [PubMed] [Related articles]
17.	Machine learning for regulatory analysis and transcription factor target prediction in yeast. Holloway DT, Kon M, Delisi C Syst Synth Biol 2007 Mar, 1:25-46 [PubMed Central] [PubMed] [Related articles]

This article is also cited by 11 articles in BioMed Central

You can also check ISI Web of Science for additional citations (subscription required)

printer friendly

to [Help]

Terms and Conditions Privacy statement Information for advertisers Jobs at BMC Contact us