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A comprehensive transcript index of the human genome generated using microarrays and computational approaches.
Schadt EE, Edwards SW, GuhaThakurta D, Holder D, Ying L, Svetnik V, Leonardson A, Hart KW, Russell A, Li G, Cavet G, Castle J, McDonagh P, Kan Z, Chen R, Kasarskis A, Margarint M, Caceres RM, Johnson JM, Armour CD, Garrett-Engele PW, Tsinoremas NF, Shoemaker DD
Genome Biol
2004,
5
:R73
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PubMed Central articles that cite the above article:
1.
Evidence for variation in abundance of antisense transcripts between multicellular animals but no relationship between antisense transcriptionand organismic complexity.
Sun M, Hurst LD, Carmichael GG, Chen J
Genome Res
2006 Jul,
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Functionality of intergenic transcription: an evolutionary comparison.
Khaitovich P, Kelso J, Franz H, Visagie J, Giger T, Joerchel S, Petzold E, Green RE, Lachmann M, Pääbo S
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2006 Oct 13,
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Comprehensive identification of Drosophila dorsal-ventral patterning genes using a whole-genome tiling array.
Biemar F, Nix DA, Piel J, Peterson B, Ronshaugen M, Sementchenko V, Bell I, Manak JR, Levine MS
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Issues in the analysis of oligonucleotide tiling microarrays for transcript mapping.
Royce TE, Rozowsky JS, Bertone P, Samanta M, Stolc V, Weissman S, Snyder M, Gerstein M
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2005 Aug,
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Differential screening of phage-ab libraries by oligonucleotide microarray technology.
Monaci P, Luzzago A, Santini C, De Pra A, Arcuri M, Magistri F, Bellini A, Ansuini H, Ambrosio M, Ammendola V, Bigotti MG, Cirillo A, Nuzzo M, Nasti AA, Neuner P, Orsatti L, Pezzanera M, Sbardellati A, Silvestre G, Uva P, Viti V, Barbato G, Colloca S, Demartis A, De Rinaldis E, Giampaoli S, Lahm A, Palombo F, Talamo F, Vitelli A, Nicosia A, Cortese R
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Identification of Histoplasma capsulatum transcripts induced in response to reactive nitrogen species.
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Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome.
Ravasi T, Suzuki H, Pang KC, Katayama S, Furuno M, Okunishi R, Fukuda S, Ru K, Frith MC, Gongora MM, Grimmond SM, Hume DA, Hayashizaki Y, Mattick JS
Genome Res
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Detecting novel low-abundant transcripts in Drosophila.
Lee S, Bao J, Zhou G, Shapiro J, Xu J, Shi RZ, Lu X, Clark T, Johnson D, Kim YC, Wing C, Tseng C, Sun M, Lin W, Wang J, Yang H, Wang J, Du W, Wu CI, Zhang X, Wang SM
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Accumulation of unstable promoter-associated transcripts upon loss of the nuclear exosome subunit Rrp6p in Saccharomyces cerevisiae.
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Assessing the performance of different high-density tiling microarray strategies for mapping transcribed regions of the human genome.
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Moving toward a system genetics view of disease.
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Novel low abundance and transient RNAs in yeast revealed by tiling microarrays and ultra high-throughput sequencing are not conserved across closely related yeast species.
Lee A, Hansen KD, Bullard J, Dudoit S, Sherlock G
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