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Aggregation of topological motifs in the Escherichia coli transcriptional regulatory network.
Dobrin R, Beg QK, Barabási AL, Oltvai ZN
BMC Bioinformatics 2004 Jan 30, 5:10
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PubMed Central articles that cite the above article:

1.	The topological relationship between the large-scale attributes and local interaction patterns of complex networks. Vázquez A, Dobrin R, Sergi D, Eckmann JP, Oltvai ZN, Barabási AL Proc Natl Acad Sci U S A 2004 Dec 28, 101:17940-5 [PubMed Central] [PubMed] [Related articles]
2.	An extended transcriptional regulatory network of Escherichia coli and analysis of its hierarchical structure and network motifs. Ma HW, Kumar B, Ditges U, Gunzer F, Buer J, Zeng AP Nucleic Acids Res 2004, 32:6643-9 [PubMed Central] [PubMed] [Related articles]
3.	Topological units of environmental signal processing in the transcriptional regulatory network of Escherichia coli. Balázsi G, Barabási AL, Oltvai ZN Proc Natl Acad Sci U S A 2005 May 31, 102:7841-6 [PubMed Central] [PubMed] [Related articles]
4.	The Mouse Functional Genome Database (MfunGD): functional annotation of proteins in the light of their cellular context. Ruepp A, Doudieu ON, van den Oever J, Brauner B, Dunger-Kaltenbach I, Fobo G, Frishman G, Montrone C, Skornia C, Wanka S, Rattei T, Pagel P, Riley L, Frishman D, Surmeli D, Tetko IV, Oesterheld M, Stümpflen V, Mewes HW Nucleic Acids Res 2006 Jan 1, 34:D568-71 [PubMed Central] [PubMed] [Related articles]
5.	Noise in a Small Genetic Circuit that Undergoes Bifurcation. Toulouse T, Ao P, Shmulevich I, Kauffman S Complexity 2005, 11:45-51 [PubMed Central] [PubMed] [Related articles]
6.	The information coded in the yeast response elements accounts for most of the topological properties of its transcriptional regulation network. Balcan D, Kabakçiolu A, Mungan M, Erzan A PLoS One 2007, 2:e501 [PubMed Central] [PubMed] [Related articles]
7.	Evolutionary models for formation of network motifs and modularity in the Saccharomyces transcription factor network. Ward JJ, Thornton JM PLoS Comput Biol 2007 Oct, 3:1993-2002 [PubMed Central] [PubMed] [Related articles]
8.	Coordination logic of the sensing machinery in the transcriptional regulatory network of Escherichia coli. Janga SC, Salgado H, Martínez-Antonio A, Collado-Vides J Nucleic Acids Res 2007, 35:6963-72 [PubMed Central] [PubMed] [Related articles]
9.	Interplay between network structures, regulatory modes and sensing mechanisms of transcription factors in the transcriptional regulatory network of E. coli. Balaji S, Babu MM, Aravind L J Mol Biol 2007 Sep 28, 372:1108-22 [PubMed Central] [PubMed] [Related articles]
10.	What determines the assembly of transcriptional network motifs in Escherichia coli? Camas FM, Poyatos JF PLoS One 2008, 3:e3657 [PubMed Central] [PubMed] [Related articles]
11.	Functional states of the genome-scale Escherichia coli transcriptional regulatory system. Gianchandani EP, Joyce AR, Palsson B, Papin JA PLoS Comput Biol 2009 Jun, 5:e1000403 [PubMed Central] [PubMed] [Related articles]
12.	Transcriptional regulation shapes the organization of genes on bacterial chromosomes. Janga SC, Salgado H, Martínez-Antonio A Nucleic Acids Res 2009 Jun, 37:3680-8 [PubMed Central] [PubMed] [Related articles]

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