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Expression profiling of mammalian microRNAs uncovers a subset of brain-expressed microRNAs with possible roles in murine and human neuronal differentiation.
Sempere LF, Freemantle S, Pitha-Rowe I, Moss E, Dmitrovsky E, Ambros V
Genome Biol 2004, 5:R13
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[PubMed Central] [PubMed] [Related articles]

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[PubMed Central] [PubMed] [Related articles]

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[PubMed Central] [PubMed] [Related articles]

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[PubMed Central] [PubMed] [Related articles]

61.
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Ibáñez-Ventoso C, Vora M, Driscoll M
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[PubMed Central] [PubMed] [Related articles]

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PLoS One 2008, 3:e2997
[PubMed Central] [PubMed] [Related articles]

63.
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[PubMed Central] [PubMed] [Related articles]

64.
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Chen JF, Mandel EM, Thomson JM, Wu Q, Callis TE, Hammond SM, Conlon FL, Wang DZ
Nat Genet 2006 Feb, 38:228-33
[PubMed Central] [PubMed] [Related articles]

65.
Maternally imprinted microRNAs are differentially expressed during mouse and human lung development.
Williams AE, Moschos SA, Perry MM, Barnes PJ, Lindsay MA
Dev Dyn 2007 Feb, 236:572-80
[PubMed Central] [PubMed] [Related articles]

66.
Detection of metastatic head and neck squamous cell carcinoma using the relative expression of tissue-specific mir-205.
Fletcher AM, Heaford AC, Trask DK
Transl Oncol 2008 Dec, 1:202-8
[PubMed Central] [PubMed] [Related articles]

67.
microRNA-122 stimulates translation of hepatitis C virus RNA.
Henke JI, Goergen D, Zheng J, Song Y, Schüttler CG, Fehr C, Jünemann C, Niepmann M
EMBO J 2008 Dec 17, 27:3300-10
[PubMed Central] [PubMed] [Related articles]

68.
*** Unable to retrieve article 19020517 ***

[PubMed Central] [PubMed] [Related articles]

69.
MicroRNA-184 antagonizes microRNA-205 to maintain SHIP2 levels in epithelia.
Yu J, Ryan DG, Getsios S, Oliveira-Fernandes M, Fatima A, Lavker RM
Proc Natl Acad Sci U S A 2008 Dec 9, 105:19300-5
[PubMed Central] [PubMed] [Related articles]

70.
Coordinated changes in mRNA turnover, translation, and RNA processing bodies in bronchial epithelial cells following inflammatory stimulation.
Zhai Y, Zhong Z, Chen CY, Xia Z, Song L, Blackburn MR, Shyu AB
Mol Cell Biol 2008 Dec, 28:7414-26
[PubMed Central] [PubMed] [Related articles]

71.
Reciprocal expression of lin-41 and the microRNAs let-7 and mir-125 during mouse embryogenesis.
Schulman BR, Esquela-Kerscher A, Slack FJ
Dev Dyn 2005 Dec, 234:1046-54
[PubMed Central] [PubMed] [Related articles]

72.
Specific microRNAs modulate embryonic stem cell-derived neurogenesis.
Krichevsky AM, Sonntag KC, Isacson O, Kosik KS
Stem Cells 2006 Apr, 24:857-64
[PubMed Central] [PubMed] [Related articles]

73.
Cepred: predicting the co-expression patterns of the human intronic microRNAs with their host genes.
Wang D, Lu M, Miao J, Li T, Wang E, Cui Q
PLoS One 2009, 4:e4421
[PubMed Central] [PubMed] [Related articles]

74.
Identification of dynamically regulated microRNA and mRNA networks in developing oligodendrocytes.
Lau P, Verrier JD, Nielsen JA, Johnson KR, Notterpek L, Hudson LD
J Neurosci 2008 Nov 5, 28:11720-30
[PubMed Central] [PubMed] [Related articles]

75.
Inhibition of SNAP25 expression by HIV-1 Tat involves the activity of mir-128a.
Eletto D, Russo G, Passiatore G, Del Valle L, Giordano A, Khalili K, Gualco E, Peruzzi F
J Cell Physiol 2008 Sep, 216:764-70
[PubMed Central] [PubMed] [Related articles]

76.
Concise review: MicroRNA expression in multipotent mesenchymal stromal cells.
Lakshmipathy U, Hart RP
Stem Cells 2008 Feb, 26:356-63
[PubMed Central] [PubMed] [Related articles]


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