Log on / register
Feedback
|
Support
|
My details
home
|
journals A-Z
|
subject areas
|
advanced search
|
authors
|
reviewers
|
libraries
|
about
|
my BioMed Central
DAVID: Database for Annotation, Visualization, and Integrated Discovery.
Dennis G, Sherman BT, Hosack DA, Yang J, Gao W, Lane HC, Lempicki RA
Genome Biol
2003,
4
:P3
[
Full text
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
printer friendly
20 per page
50 per page
200 per page
500 per page
selected items
abstract
no abstract
any time period
7 Days
14 Days
30 Days
60 Days
90 Days
180 Days
1 Year
all 228 results
this page
selected items
to
Endnote (no abstracts)
Endnote + abstracts
Ref. Manager (no abstracts)
Ref. Manager + abstracts
RefWorks (no abstracts)
RefWorks + abstracts
BibTeX (no abstracts)
BibTeX + abstracts
ProCite (no abstracts)
ProCite + abstracts
[
Help
]
PubMed Central articles that cite the above article:
1.
Onto-Tools: an ensemble of web-accessible, ontology-based tools for the functional design and interpretation of high-throughput gene expression experiments.
Khatri P, Bhavsar P, Bawa G, Draghici S
Nucleic Acids Res
2004 Jul 1,
32
:W449-56
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
2.
GFINDer: genetic disease and phenotype location statistical analysis and mining of dynamically annotated gene lists.
Masseroli M, Galati O, Pinciroli F
Nucleic Acids Res
2005 Jul 1,
33
:W717-23
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
3.
Recent additions and improvements to the Onto-Tools.
Khatri P, Sellamuthu S, Malhotra P, Amin K, Done A, Draghici S
Nucleic Acids Res
2005 Jul 1,
33
:W762-5
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
4.
RACE: Remote Analysis Computation for gene Expression data.
Psarros M, Heber S, Sick M, Thoppae G, Harshman K, Sick B
Nucleic Acids Res
2005 Jul 1,
33
:W638-43
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
5.
Effects of ADMA upon gene expression: an insight into the pathophysiological significance of raised plasma ADMA.
Smith CL, Anthony S, Hubank M, Leiper JM, Vallance P
PLoS Med
2005 Oct,
2
:e264
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
6.
*** Unable to retrieve article 16190779 ***
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
7.
Isolation of mRNA from specific tissues of Drosophila by mRNA tagging.
Yang Z, Edenberg HJ, Davis RL
Nucleic Acids Res
2005,
33
:e148
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
8.
Global gene expression profiles reveal significant nuclear reprogramming by the blastocyst stage after cloning.
Smith SL, Everts RE, Tian XC, Du F, Sung LY, Rodriguez-Zas SL, Jeong BS, Renard JP, Lewin HA, Yang X
Proc Natl Acad Sci U S A
2005 Dec 6,
102
:17582-7
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
9.
A systematic approach to infer biological relevance and biases of gene network structures.
Antonov AV, Tetko IV, Mewes HW
Nucleic Acids Res
2006,
34
:e6
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
10.
Identification of an NF-kappaB-dependent gene network in cells infected by mammalian reovirus.
O'Donnell SM, Holm GH, Pierce JM, Tian B, Watson MJ, Chari RS, Ballard DW, Brasier AR, Dermody TS
J Virol
2006 Feb,
80
:1077-86
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
11.
Eotaxin-3 and a uniquely conserved gene-expression profile in eosinophilic esophagitis.
Blanchard C, Wang N, Stringer KF, Mishra A, Fulkerson PC, Abonia JP, Jameson SC, Kirby C, Konikoff MR, Collins MH, Cohen MB, Akers R, Hogan SP, Assa'ad AH, Putnam PE, Aronow BJ, Rothenberg ME
J Clin Invest
2006 Feb,
116
:536-47
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
12.
BMI1 is a target gene of E2F-1 and is strongly expressed in primary neuroblastomas.
Nowak K, Kerl K, Fehr D, Kramps C, Gessner C, Killmer K, Samans B, Berwanger B, Christiansen H, Lutz W
Nucleic Acids Res
2006,
34
:1745-54
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
13.
Histamine signaling through the H(2) receptor in the Peyer's patch is important for controlling Yersinia enterocolitica infection.
Handley SA, Dube PH, Miller VL
Proc Natl Acad Sci U S A
2006 Jun 13,
103
:9268-73
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
14.
A comprehensive structure-function analysis of Arabidopsis SNI1 defines essential regions and transcriptional repressor activity.
Mosher RA, Durrant WE, Wang D, Song J, Dong X
Plant Cell
2006 Jul,
18
:1750-65
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
15.
Filaria-induced monocyte dysfunction and its reversal following treatment.
Semnani RT, Keiser PB, Coulibaly YI, Keita F, Diallo AA, Traore D, Diallo DA, Doumbo OK, Traore SF, Kubofcik J, Klion AD, Nutman TB
Infect Immun
2006 Aug,
74
:4409-17
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
16.
Repression and loss of gene expression outpaces activation and gain in recently duplicated fly genes.
Oakley TH, Ostman B, Wilson AC
Proc Natl Acad Sci U S A
2006 Aug 1,
103
:11637-41
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
17.
Integrating genetic and network analysis to characterize genes related to mouse weight.
Ghazalpour A, Doss S, Zhang B, Wang S, Plaisier C, Castellanos R, Brozell A, Schadt EE, Drake TA, Lusis AJ, Horvath S
PLoS Genet
2006 Aug 18,
2
:e130
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
18.
*** Unable to retrieve article 16934000 ***
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
19.
Calcineurin/Nfat signaling is required for perinatal lung maturation and function.
Davé V, Childs T, Xu Y, Ikegami M, Besnard V, Maeda Y, Wert SE, Neilson JR, Crabtree GR, Whitsett JA
J Clin Invest
2006 Oct,
116
:2597-609
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
20.
A genomic approach to identify regulatory nodes in the transcriptional network of systemic acquired resistance in plants.
Wang D, Amornsiripanitch N, Dong X
PLoS Pathog
2006 Nov,
2
:e123
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
21.
A genomic approach to identify regulatory nodes in the transcriptional network of systemic acquired resistance in plants.
Wang D, Amornsiripanitch N, Dong X
PLoS Pathog
2006 Nov,
2
:e123
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
22.
A central regulatory role for eosinophils and the eotaxin/CCR3 axis in chronic experimental allergic airway inflammation.
Fulkerson PC, Fischetti CA, McBride ML, Hassman LM, Hogan SP, Rothenberg ME
Proc Natl Acad Sci U S A
2006 Oct 31,
103
:16418-23
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
23.
Diminished production of monocyte proinflammatory cytokines during human immunodeficiency virus viremia is mediated by type I interferons.
Tilton JC, Johnson AJ, Luskin MR, Manion MM, Yang J, Adelsberger JW, Lempicki RA, Hallahan CW, McLaughlin M, Mican JM, Metcalf JA, Iyasere C, Connors M
J Virol
2006 Dec,
80
:11486-97
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
24.
Meta-analysis of differentiating mouse embryonic stem cell gene expression kinetics reveals early change of a small gene set.
Glover CH, Marin M, Eaves CJ, Helgason CD, Piret JM, Bryan J
PLoS Comput Biol
2006 Nov 24,
2
:e158
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
25.
GO PaD: the Gene Ontology Partition Database.
Alterovitz G, Xiang M, Mohan M, Ramoni MF
Nucleic Acids Res
2007 Jan,
35
:D322-7
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
26.
The promoters of human cell cycle genes integrate signals from two tumor suppressive pathways during cellular transformation.
Tabach Y, Milyavsky M, Shats I, Brosh R, Zuk O, Yitzhaky A, Mantovani R, Domany E, Rotter V, Pilpel Y
Mol Syst Biol
2005,
1
:2005.0022
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
27.
Absolute enrichment: gene set enrichment analysis for homeostatic systems.
Saxena V, Orgill D, Kohane I
Nucleic Acids Res
2006,
34
:e151
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
28.
Cellular and molecular consequences of peroxisome proliferator-activated receptor-gamma activation in ovarian cancer cells.
Vignati S, Albertini V, Rinaldi A, Kwee I, Riva C, Oldrini R, Capella C, Bertoni F, Carbone GM, Catapano CV
Neoplasia
2006 Oct,
8
:851-61
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
29.
A genome-wide screen for promoter methylation in lung cancer identifies novel methylation markers for multiple malignancies.
Shames DS, Girard L, Gao B, Sato M, Lewis CM, Shivapurkar N, Jiang A, Perou CM, Kim YH, Pollack JR, Fong KM, Lam CL, Wong M, Shyr Y, Nanda R, Olopade OI, Gerald W, Euhus DM, Shay JW, Gazdar AF, Minna JD
PLoS Med
2006 Dec,
3
:e486
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
30.
*** Unable to retrieve article 17194187 ***
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
31.
AgBase: a unified resource for functional analysis in agriculture.
McCarthy FM, Bridges SM, Wang N, Magee GB, Williams WP, Luthe DS, Burgess SC
Nucleic Acids Res
2007 Jan,
35
:D599-603
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
32.
A high-resolution map of segmental DNA copy number variation in the mouse genome.
Graubert TA, Cahan P, Edwin D, Selzer RR, Richmond TA, Eis PS, Shannon WD, Li X, McLeod HL, Cheverud JM, Ley TJ
PLoS Genet
2007 Jan 5,
3
:e3
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
33.
*** Unable to retrieve article 17206864 ***
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
34.
The (in)dependence of alternative splicing and gene duplication.
Talavera D, Vogel C, Orozco M, Teichmann SA, de la Cruz X
PLoS Comput Biol
2007 Mar 2,
3
:e33
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
35.
NOTCH1 directly regulates c-MYC and activates a feed-forward-loop transcriptional network promoting leukemic cell growth.
Palomero T, Lim WK, Odom DT, Sulis ML, Real PJ, Margolin A, Barnes KC, O'Neil J, Neuberg D, Weng AP, Aster JC, Sigaux F, Soulier J, Look AT, Young RA, Califano A, Ferrando AA
Proc Natl Acad Sci U S A
2006 Nov 28,
103
:18261-6
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
36.
*** Unable to retrieve article 17335345 ***
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
37.
Discovering biological guilds through topological abstraction.
Alterovitz G, Ramoni MF
AMIA Annu Symp Proc
2006,
:1-5
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
38.
Differential cerebral cortex transcriptomes of baboon neonates consuming moderate and high docosahexaenoic acid formulas.
Kothapalli KS, Anthony JC, Pan BS, Hsieh AT, Nathanielsz PW, Brenna JT
PLoS One
2007,
2
:e370
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
39.
Activation of MAPK pathways links LMNA mutations to cardiomyopathy in Emery-Dreifuss muscular dystrophy.
Muchir A, Pavlidis P, Decostre V, Herron AJ, Arimura T, Bonne G, Worman HJ
J Clin Invest
2007 May,
117
:1282-93
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
40.
Repetitive sequence environment distinguishes housekeeping genes.
Eller CD, Regelson M, Merriman B, Nelson S, Horvath S, Marahrens Y
Gene
2007 Apr 1,
390
:153-65
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
41.
Graph-based identification of cancer signaling pathways from published gene expression signatures using PubLiME.
Finocchiaro G, Mancuso FM, Cittaro D, Muller H
Nucleic Acids Res
2007,
35
:2343-55
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
42.
The early developmental gene Semaphorin 5c contributes to olfactory behavior in adult Drosophila.
Rollmann SM, Yamamoto A, Goossens T, Zwarts L, Callaerts-Végh Z, Callaerts P, Norga K, Mackay TF, Anholt RR
Genetics
2007 Jun,
176
:947-56
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
43.
Transcription profiling of C/EBP targets identifies Per2 as a gene implicated in myeloid leukemia.
Gery S, Gombart AF, Yi WS, Koeffler C, Hofmann WK, Koeffler HP
Blood
2005 Oct 15,
106
:2827-36
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
44.
Integrative analysis of the mouse embryonic transcriptome.
Singh AV, Knudsen KB, Knudsen TB
Bioinformation
2007,
1
:406-13
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
45.
FatiGO +: a functional profiling tool for genomic data. Integration of functional annotation, regulatory motifs and interaction data with microarray experiments.
Al-Shahrour F, Minguez P, Tárraga J, Medina I, Alloza E, Montaner D, Dopazo J
Nucleic Acids Res
2007 Jul,
35
:W91-6
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
46.
g:Profiler--a web-based toolset for functional profiling of gene lists from large-scale experiments.
Reimand J, Kull M, Peterson H, Hansen J, Vilo J
Nucleic Acids Res
2007 Jul,
35
:W193-200
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
47.
DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists.
Huang W, Sherman BT, Tan Q, Kir J, Liu D, Bryant D, Guo Y, Stephens R, Baseler MW, Lane HC, Lempicki RA
Nucleic Acids Res
2007 Jul,
35
:W169-75
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
48.
Transactivation of miR-34a by p53 broadly influences gene expression and promotes apoptosis.
Chang TC, Wentzel EA, Kent OA, Ramachandran K, Mullendore M, Lee KH, Feldmann G, Yamakuchi M, Ferlito M, Lowenstein CJ, Arking DE, Beer MA, Maitra A, Mendell JT
Mol Cell
2007 Jun 8,
26
:745-52
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
49.
Unbiased gene expression analysis implicates the huntingtin polyglutamine tract in extra-mitochondrial energy metabolism.
Lee JM, Ivanova EV, Seong IS, Cashorali T, Kohane I, Gusella JF, MacDonald ME
PLoS Genet
2007 Aug,
3
:e135
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
50.
*** Unable to retrieve article 17708681 ***
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
51.
B cell activator PAX5 promotes lymphomagenesis through stimulation of B cell receptor signaling.
Cozma D, Yu D, Hodawadekar S, Azvolinsky A, Grande S, Tobias JW, Metzgar MH, Paterson J, Erikson J, Marafioti T, Monroe JG, Atchison ML, Thomas-Tikhonenko A
J Clin Invest
2007 Sep,
117
:2602-10
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
52.
Transcriptional profile of Rous Sarcoma Virus transformed chicken embryo fibroblasts reveals new signaling targets of viral-src.
Masker K, Golden A, Gaffney CJ, Mazack V, Schwindinger WF, Zhang W, Wang LH, Carey DJ, Sudol M
Virology
2007 Jul 20,
364
:10-20
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
53.
Gene expression analysis in pregnant women and their infants identifies unique fetal biomarkers that circulate in maternal blood.
Maron JL, Johnson KL, Slonim D, Lai CQ, Ramoni M, Alterovitz G, Jarrah Z, Yang Z, Bianchi DW
J Clin Invest
2007 Oct,
117
:3007-19
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
54.
Pleiotropic effects and compensation mechanisms determine tissue specificity in mitochondrial myopathy and sideroblastic anemia (MLASA).
Bykhovskaya Y, Mengesha E, Fischel-Ghodsian N
Mol Genet Metab
2007 Jun,
91
:148-56
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
55.
Differential gene expression in CD8(+) cells from HIV-1-infected subjects showing suppression of HIV replication.
Martinez-Mariño B, Foster H, Hao Y, Levy JA
Virology
2007 May 25,
362
:217-25
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
56.
Weighted gene coexpression network analysis strategies applied to mouse weight.
Fuller TF, Ghazalpour A, Aten JE, Drake TA, Lusis AJ, Horvath S
Mamm Genome
2007 Jul,
18
:463-72
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
57.
Using gene chips to identify organ-specific, smooth muscle responses to experimental diabetes: potential applications to urological diseases.
Hipp JD, Davies KP, Tar M, Valcic M, Knoll A, Melman A, Christ GJ
BJU Int
2007 Feb,
99
:418-30
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
58.
Genome-level longitudinal expression of signaling pathways and gene networks in pediatric septic shock.
Shanley TP, Cvijanovich N, Lin R, Allen GL, Thomas NJ, Doctor A, Kalyanaraman M, Tofil NM, Penfil S, Monaco M, Odoms K, Barnes M, Sakthivel B, Aronow BJ, Wong HR
Mol Med
2007 Sep-Oct,
13
:495-508
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
59.
Differential gene expression of p27Kip1 and Rb knockout pituitary tumors associated with altered growth and angiogenesis.
Chien WM, Garrison K, Caufield E, Orthel J, Dill J, Fero ML
Cell Cycle
2007 Mar 15,
6
:750-7
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
60.
Distinctive patterns of microRNA expression in primary muscular disorders.
Eisenberg I, Eran A, Nishino I, Moggio M, Lamperti C, Amato AA, Lidov HG, Kang PB, North KN, Mitrani-Rosenbaum S, Flanigan KM, Neely LA, Whitney D, Beggs AH, Kohane IS, Kunkel LM
Proc Natl Acad Sci U S A
2007 Oct 23,
104
:17016-21
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
61.
Regulatory pathway analysis by high-throughput in situ hybridization.
Visel A, Carson J, Oldekamp J, Warnecke M, Jakubcakova V, Zhou X, Shaw CA, Alvarez-Bolado G, Eichele G
PLoS Genet
2007 Oct,
3
:1867-83
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
62.
Adaptation and increased susceptibility to infection associated with constitutive expression of misfolded SP-C.
Bridges JP, Xu Y, Na CL, Wong HR, Weaver TE
J Cell Biol
2006 Jan 30,
172
:395-407
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
63.
Regulation of myogenic progenitor proliferation in human fetal skeletal muscle by BMP4 and its antagonist Gremlin.
Frank NY, Kho AT, Schatton T, Murphy GF, Molloy MJ, Zhan Q, Ramoni MF, Frank MH, Kohane IS, Gussoni E
J Cell Biol
2006 Oct 9,
175
:99-110
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
64.
Genome-wide analyses of human perisylvian cerebral cortical patterning.
Abrahams BS, Tentler D, Perederiy JV, Oldham MC, Coppola G, Geschwind DH
Proc Natl Acad Sci U S A
2007 Nov 6,
104
:17849-54
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
65.
Genomic and functional studies of Drosophila sex hierarchy regulated gene expression in adult head and nervous system tissues.
Goldman TD, Arbeitman MN
PLoS Genet
2007 Nov,
3
:e216
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
66.
*** Unable to retrieve article 18039034 ***
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
67.
Dysregulation of X-linked gene expression in Klinefelter's syndrome and association with verbal cognition.
Vawter MP, Harvey PD, DeLisi LE
Am J Med Genet B Neuropsychiatr Genet
2007 Sep 5,
144B
:728-34
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
68.
Individual matrix metalloproteinases control distinct transcriptional responses in airway epithelial cells infected with Pseudomonas aeruginosa.
Kassim SY, Gharib SA, Mecham BH, Birkland TP, Parks WC, McGuire JK
Infect Immun
2007 Dec,
75
:5640-50
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
69.
Constitutively active Akt induces ectodermal defects and impaired bone morphogenetic protein signaling.
Segrelles C, Moral M, Lorz C, Santos M, Lu J, Cascallana JL, Lara MF, Carbajal S, Martínez-Cruz AB, García-Escudero R, Beltran L, Segovia JC, Bravo A, DiGiovanni J, Paramio JM
Mol Biol Cell
2008 Jan,
19
:137-49
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
70.
TERT promotes epithelial proliferation through transcriptional control of a Myc- and Wnt-related developmental program.
Choi J, Southworth LK, Sarin KY, Venteicher AS, Ma W, Chang W, Cheung P, Jun S, Artandi MK, Shah N, Kim SK, Artandi SE
PLoS Genet
2008 Jan,
4
:e10
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
71.
*** Unable to retrieve article 18208333 ***
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
72.
Conditional deletion of Smad1 and Smad5 in somatic cells of male and female gonads leads to metastatic tumor development in mice.
Pangas SA, Li X, Umans L, Zwijsen A, Huylebroeck D, Gutierrez C, Wang D, Martin JF, Jamin SP, Behringer RR, Robertson EJ, Matzuk MM
Mol Cell Biol
2008 Jan,
28
:248-57
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
73.
Rapid onset of intestinal epithelial barrier dysfunction in primary human immunodeficiency virus infection is driven by an imbalance between immune response and mucosal repair and regeneration.
Sankaran S, George MD, Reay E, Guadalupe M, Flamm J, Prindiville T, Dandekar S
J Virol
2008 Jan,
82
:538-45
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
74.
*** Unable to retrieve article 17953485 ***
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
75.
Regulation of liver regeneration and hepatocarcinogenesis by suppressor of cytokine signaling 3.
Riehle KJ, Campbell JS, McMahan RS, Johnson MM, Beyer RP, Bammler TK, Fausto N
J Exp Med
2008 Jan 21,
205
:91-103
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
76.
SH2B1beta (SH2-Bbeta) enhances expression of a subset of nerve growth factor-regulated genes important for neuronal differentiation including genes encoding urokinase plasminogen activator receptor and matrix metalloproteinase 3/10.
Chen L, Maures TJ, Jin H, Huo JS, Rabbani SA, Schwartz J, Carter-Su C
Mol Endocrinol
2008 Feb,
22
:454-76
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
77.
Defective signal transduction in B lymphocytes lacking presenilin proteins.
Yagi T, Giallourakis C, Mohanty S, Scheidig C, Shen J, Zheng H, Xavier RJ, Shaw AC
Proc Natl Acad Sci U S A
2008 Jan 22,
105
:979-84
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
78.
Global identification of Myc target genes reveals its direct role in mitochondrial biogenesis and its E-box usage in vivo.
Kim J, Lee JH, Iyer VR
PLoS One
2008,
3
:e1798
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
79.
Distinct genomic signatures of adaptation in pre- and postnatal environments during human evolution.
Uddin M, Goodman M, Erez O, Romero R, Liu G, Islam M, Opazo JC, Sherwood CC, Grossman LI, Wildman DE
Proc Natl Acad Sci U S A
2008 Mar 4,
105
:3215-20
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
80.
The Mediator subunit MDT-15 confers metabolic adaptation to ingested material.
Taubert S, Hansen M, Van Gilst MR, Cooper SB, Yamamoto KR
PLoS Genet
2008 Feb,
4
:e1000021
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
81.
Identification of genes directly regulated by the oncogene ZNF217 using chromatin immunoprecipitation (ChIP)-chip assays.
Krig SR, Jin VX, Bieda MC, O'Geen H, Yaswen P, Green R, Farnham PJ
J Biol Chem
2007 Mar 30,
282
:9703-12
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
82.
The MHC class I peptide repertoire is molded by the transcriptome.
Fortier MH, Caron E, Hardy MP, Voisin G, Lemieux S, Perreault C, Thibault P
J Exp Med
2008 Mar 17,
205
:595-610
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
83.
High-throughput analysis of promoter occupancy reveals direct neural targets of FOXP2, a gene mutated in speech and language disorders.
Vernes SC, Spiteri E, Nicod J, Groszer M, Taylor JM, Davies KE, Geschwind DH, Fisher SE
Am J Hum Genet
2007 Dec,
81
:1232-50
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
84.
Identification of the transcriptional targets of FOXP2, a gene linked to speech and language, in developing human brain.
Spiteri E, Konopka G, Coppola G, Bomar J, Oldham M, Ou J, Vernes SC, Fisher SE, Ren B, Geschwind DH
Am J Hum Genet
2007 Dec,
81
:1144-57
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
85.
Heterogeneity of human macrophages in culture and in atherosclerotic plaques.
Waldo SW, Li Y, Buono C, Zhao B, Billings EM, Chang J, Kruth HS
Am J Pathol
2008 Apr,
172
:1112-26
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
86.
Using ChIP-chip technology to reveal common principles of transcriptional repression in normal and cancer cells.
Komashko VM, Acevedo LG, Squazzo SL, Iyengar SS, Rabinovich A, O'Geen H, Green R, Farnham PJ
Genome Res
2008 Apr,
18
:521-32
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
87.
A critical developmental switch defines the kinetics of kidney cyst formation after loss of Pkd1.
Piontek K, Menezes LF, Garcia-Gonzalez MA, Huso DL, Germino GG
Nat Med
2007 Dec,
13
:1490-5
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
88.
Cross-species comparison of human and mouse intestinal polyps reveals conserved mechanisms in adenomatous polyposis coli (APC)-driven tumorigenesis.
Gaspar C, Cardoso J, Franken P, Molenaar L, Morreau H, Möslein G, Sampson J, Boer JM, de Menezes RX, Fodde R
Am J Pathol
2008 May,
172
:1363-80
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
89.
Predominance of interferon-related responses in the brain during murine malaria, as identified by microarray analysis.
Miu J, Hunt NH, Ball HJ
Infect Immun
2008 May,
76
:1812-24
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
90.
Misexpression of MIA disrupts lung morphogenesis and causes neonatal death.
Lin S, Ikegami M, Xu Y, Bosserhoff AK, Malkinson AM, Shannon JM
Dev Biol
2008 Apr 15,
316
:441-55
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
91.
Liver-specific hepatocyte nuclear factor-4alpha deficiency: greater impact on gene expression in male than in female mouse liver.
Holloway MG, Miles GD, Dombkowski AA, Waxman DJ
Mol Endocrinol
2008 May,
22
:1274-86
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
92.
ERdj4 and ERdj5 are required for endoplasmic reticulum-associated protein degradation of misfolded surfactant protein C.
Dong M, Bridges JP, Apsley K, Xu Y, Weaver TE
Mol Biol Cell
2008 Jun,
19
:2620-30
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
93.
Public databases and software for the pathway analysis of cancer genomes.
Tsui IF, Chari R, Buys TP, Lam WL
Cancer Inform
2007,
3
:379-97
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
94.
An evolutionarily conserved sexual signature in the primate brain.
Reinius B, Saetre P, Leonard JA, Blekhman R, Merino-Martinez R, Gilad Y, Jazin E
PLoS Genet
2008 Jun,
4
:e1000100
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
95.
A multiplexed proteomics approach to differentiate neurite outgrowth patterns.
Liu T, D'mello V, Deng L, Hu J, Ricardo M, Pan S, Lu X, Wadsworth S, Siekierka J, Birge R, Li H
J Neurosci Methods
2006 Nov 15,
158
:22-9
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
96.
Specific DNA-binding by apicomplexan AP2 transcription factors.
De Silva EK, Gehrke AR, Olszewski K, León I, Chahal JS, Bulyk ML, Llinás M
Proc Natl Acad Sci U S A
2008 Jun 17,
105
:8393-8
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
97.
Discovery of agents that eradicate leukemia stem cells using an in silico screen of public gene expression data.
Hassane DC, Guzman ML, Corbett C, Li X, Abboud R, Young F, Liesveld JL, Carroll M, Jordan CT
Blood
2008 Jun 15,
111
:5654-62
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
98.
Network-based global inference of human disease genes.
Wu X, Jiang R, Zhang MQ, Li S
Mol Syst Biol
2008,
4
:189
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
99.
Macrophage and T-Cell Gene Expression in a Model of Early Infection with the Protozoan Leishmania chagasi.
Ettinger NA, Wilson ME
PLoS Negl Trop Dis
2008,
2
:e252
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
100.
Effect of destrin mutations on the gene expression profile in vivo.
Verdoni AM, Aoyama N, Ikeda A, Ikeda S
Physiol Genomics
2008 Jun 12,
34
:9-21
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
101.
Haploinsufficiency of RPS14 in 5q- syndrome is associated with deregulation of ribosomal- and translation-related genes.
Pellagatti A, Hellström-Lindberg E, Giagounidis A, Perry J, Malcovati L, Della Porta MG, Jädersten M, Killick S, Fidler C, Cazzola M, Wainscoat JS, Boultwood J
Br J Haematol
2008 Jul,
142
:57-64
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
102.
Temporal profiling of the chromatin proteome reveals system-wide responses to replication inhibition.
Khoudoli GA, Gillespie PJ, Stewart G, Andersen JS, Swedlow JR, Blow JJ
Curr Biol
2008 Jun 3,
18
:838-43
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
103.
Validating the genomic signature of pediatric septic shock.
Cvijanovich N, Shanley TP, Lin R, Allen GL, Thomas NJ, Checchia P, Anas N, Freishtat RJ, Monaco M, Odoms K, Sakthivel B, Wong HR, Genomics of Pediatric SIRS/Septic Shock Investigators
Physiol Genomics
2008 Jun 12,
34
:127-34
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
104.
Identification of a common gene expression response in different lung inflammatory diseases in rodents and macaques.
Pennings JL, Kimman TG, Janssen R
PLoS One
2008,
3
:e2596
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
105.
GOEAST: a web-based software toolkit for Gene Ontology enrichment analysis.
Zheng Q, Wang XJ
Nucleic Acids Res
2008 Jul 1,
36
:W358-63
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
106.
Babelomics: advanced functional profiling of transcriptomics, proteomics and genomics experiments.
Al-Shahrour F, Carbonell J, Minguez P, Goetz S, Conesa A, Tárraga J, Medina I, Alloza E, Montaner D, Dopazo J
Nucleic Acids Res
2008 Jul 1,
36
:W341-6
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
107.
MADNet: microarray database network web server.
Segota I, Bartonicek N, Vlahovicek K
Nucleic Acids Res
2008 Jul 1,
36
:W332-5
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
108.
MassNet: a functional annotation service for protein mass spectrometry data.
Park D, Kim BC, Cho SW, Park SJ, Choi JS, Kim SI, Bhak J, Lee S
Nucleic Acids Res
2008 Jul 1,
36
:W491-5
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
109.
Altered metabolism of growth hormone receptor mutant mice: a combined NMR metabonomics and microarray study.
Schirra HJ, Anderson CG, Wilson WJ, Kerr L, Craik DJ, Waters MJ, Lichanska AM
PLoS One
2008,
3
:e2764
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
110.
Inadequate protein intake affects skeletal muscle transcript profiles in older humans.
Thalacker-Mercer AE, Fleet JC, Craig BA, Carnell NS, Campbell WW
Am J Clin Nutr
2007 May,
85
:1344-52
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
111.
Identification of the TFII-I family target genes in the vertebrate genome.
Chimge NO, Makeyev AV, Ruddle FH, Bayarsaihan D
Proc Natl Acad Sci U S A
2008 Jul 1,
105
:9006-10
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
112.
A comprehensive negative regulatory program controlled by Brn3b to ensure ganglion cell specification from multipotential retinal precursors.
Qiu F, Jiang H, Xiang M
J Neurosci
2008 Mar 26,
28
:3392-403
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
113.
Identify alternative splicing events based on position-specific evolutionary conservation.
Chen L, Zheng S
PLoS One
2008,
3
:e2806
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
114.
Preservation of genes involved in sterol metabolism in cholesterol auxotrophs: facts and hypotheses.
Vinci G, Xia X, Veitia RA
PLoS One
2008,
3
:e2883
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
115.
Epithelial-to-mesenchymal transition in early transplant tubulointerstitial damage.
Vitalone MJ, O'Connell PJ, Jimenez-Vera E, Yuksel A, Wavamunno M, Fung CL, Chapman JR, Nankivell BJ
J Am Soc Nephrol
2008 Aug,
19
:1571-83
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
116.
Improved elucidation of biological processes linked to diabetic nephropathy by single probe-based microarray data analysis.
Cohen CD, Lindenmeyer MT, Eichinger F, Hahn A, Seifert M, Moll AG, Schmid H, Kiss E, Gröne E, Gröne HJ, Kretzler M, Werner T, Nelson PJ
PLoS One
2008,
3
:e2937
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
117.
Co-factors of LIM domains (Clims/Ldb/Nli) regulate corneal homeostasis and maintenance of hair follicle stem cells.
Xu X, Mannik J, Kudryavtseva E, Lin KK, Flanagan LA, Spencer J, Soto A, Wang N, Lu Z, Yu Z, Monuki ES, Andersen B
Dev Biol
2007 Dec 15,
312
:484-500
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
118.
Colonic gene expression profile in NHE3-deficient mice: evidence for spontaneous distal colitis.
Laubitz D, Larmonier CB, Bai A, Midura-Kiela MT, Lipko MA, Thurston RD, Kiela PR, Ghishan FK
Am J Physiol Gastrointest Liver Physiol
2008 Jul,
295
:G63-G77
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
119.
Promoter ChIP-chip analysis in mouse testis reveals Y chromosome occupancy by HSF2.
Akerfelt M, Henriksson E, Laiho A, Vihervaara A, Rautoma K, Kotaja N, Sistonen L
Proc Natl Acad Sci U S A
2008 Aug 12,
105
:11224-9
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
120.
A quantitative atlas of mitotic phosphorylation.
Dephoure N, Zhou C, Villén J, Beausoleil SA, Bakalarski CE, Elledge SJ, Gygi SP
Proc Natl Acad Sci U S A
2008 Aug 5,
105
:10762-7
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
121.
Transcriptome-wide assessment of human brain and lymphocyte senescence.
Hong MG, Myers AJ, Magnusson PK, Prince JA
PLoS One
2008,
3
:e3024
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
122.
Hepatic transcriptional networks induced by exposure to 2,3,7,8-tetrachlorodibenzo-p-dioxin.
Hayes KR, Zastrow GM, Nukaya M, Pande K, Glover E, Maufort JP, Liss AL, Liu Y, Moran SM, Vollrath AL, Bradfield CA
Chem Res Toxicol
2007 Nov,
20
:1573-81
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
123.
Gene network dynamics controlling keratinocyte migration.
Busch H, Camacho-Trullio D, Rogon Z, Breuhahn K, Angel P, Eils R, Szabowski A
Mol Syst Biol
2008,
4
:199
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
124.
Sex-specific pathways in early cardiac response to pressure overload in mice.
Witt H, Schubert C, Jaekel J, Fliegner D, Penkalla A, Tiemann K, Stypmann J, Roepcke S, Brokat S, Mahmoodzadeh S, Brozova E, Davidson MM, Ruiz Noppinger P, Grohé C, Regitz-Zagrosek V
J Mol Med
2008 Sep,
86
:1013-24
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
125.
Global gene expression as a function of the iron status of the bacterial cell: influence of differentially expressed genes in the virulence of the human pathogen Vibrio vulnificus.
Alice AF, Naka H, Crosa JH
Infect Immun
2008 Sep,
76
:4019-37
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
126.
Genome-wide analysis of natural selection on human cis-elements.
Sethupathy P, Giang H, Plotkin JB, Hannenhalli S
PLoS One
2008,
3
:e3137
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
127.
Identification and analysis of co-occurrence networks with NetCutter.
Müller H, Mancuso F
PLoS One
2008,
3
:e3178
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
128.
Comparisons of tyrosine phosphorylated proteins in cells expressing lung cancer-specific alleles of EGFR and KRAS.
Guha U, Chaerkady R, Marimuthu A, Patterson AS, Kashyap MK, Harsha HC, Sato M, Bader JS, Lash AE, Minna JD, Pandey A, Varmus HE
Proc Natl Acad Sci U S A
2008 Sep 16,
105
:14112-7
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
129.
The evolving transcriptome of head and neck squamous cell carcinoma: a systematic review.
Yu YH, Kuo HK, Chang KW
PLoS One
2008,
3
:e3215
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
130.
Hedgehog signaling regulates epithelial-mesenchymal transition during biliary fibrosis in rodents and humans.
Omenetti A, Porrello A, Jung Y, Yang L, Popov Y, Choi SS, Witek RP, Alpini G, Venter J, Vandongen HM, Syn WK, Baroni GS, Benedetti A, Schuppan D, Diehl AM
J Clin Invest
2008 Oct,
118
:3331-42
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
131.
Optimized proteomic analysis of a mouse model of cerebellar dysfunction using amine-specific isobaric tags.
Hu J, Qian J, Borisov O, Pan S, Li Y, Liu T, Deng L, Wannemacher K, Kurnellas M, Patterson C, Elkabes S, Li H
Proteomics
2006 Aug,
6
:4321-34
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
132.
Glucocorticoid signaling defines a novel commitment state during adipogenesis in vitro.
Pantoja C, Huff JT, Yamamoto KR
Mol Biol Cell
2008 Oct,
19
:4032-41
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
133.
DAVID gene ID conversion tool.
Huang W, Sherman BT, Stephens R, Baseler MW, Lane HC, Lempicki RA
Bioinformation
2008,
2
:428-30
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
134.
Sequential and concerted gene expression changes in a chronic in vitro model of parkinsonism.
Greene JG, Greenamyre JT, Dingledine R
Neuroscience
2008 Mar 3,
152
:198-207
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
135.
The MYCN oncogene is a direct target of miR-34a.
Wei JS, Song YK, Durinck S, Chen QR, Cheuk AT, Tsang P, Zhang Q, Thiele CJ, Slack A, Shohet J, Khan J
Oncogene
2008 Sep 4,
27
:5204-13
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
136.
An integrated approach for the analysis of biological pathways using mixed models.
Wang L, Zhang B, Wolfinger RD, Chen X
PLoS Genet
2008 Jul,
4
:e1000115
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
137.
Celecoxib pre-treatment in human colorectal adenocarcinoma patients is associated with gene expression alterations suggestive of diminished cellular proliferation.
Auman JT, Church R, Lee SY, Watson MA, Fleshman JW, Mcleod HL
Eur J Cancer
2008 Aug,
44
:1754-60
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
138.
Analysis of the mechanisms mediating tumor-specific changes in gene expression in human liver tumors.
Acevedo LG, Bieda M, Green R, Farnham PJ
Cancer Res
2008 Apr 15,
68
:2641-51
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
139.
Genome-wide profiling of PPARgamma:RXR and RNA polymerase II occupancy reveals temporal activation of distinct metabolic pathways and changes in RXR dimer composition during adipogenesis.
Nielsen R, Pedersen TA, Hagenbeek D, Moulos P, Siersbaek R, Megens E, Denissov S, Børgesen M, Francoijs KJ, Mandrup S, Stunnenberg HG
Genes Dev
2008 Nov 1,
22
:2953-67
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
140.
Dissection of a QTL hotspot on mouse distal chromosome 1 that modulates neurobehavioral phenotypes and gene expression.
Mozhui K, Ciobanu DC, Schikorski T, Wang X, Lu L, Williams RW
PLoS Genet
2008 Nov,
4
:e1000260
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
141.
AML1/ETO oncoprotein is directed to AML1 binding regions and co-localizes with AML1 and HEB on its targets.
Gardini A, Cesaroni M, Luzi L, Okumura AJ, Biggs JR, Minardi SP, Venturini E, Zhang DE, Pelicci PG, Alcalay M
PLoS Genet
2008 Nov,
4
:e1000275
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
142.
Different transcriptional control of metabolism and extracellular matrix in visceral and subcutaneous fat of obese and rimonabant treated mice.
Poussin C, Hall D, Minehira K, Galzin AM, Tarussio D, Thorens B
PLoS One
2008,
3
:e3385
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
143.
STOX1 overexpression in choriocarcinoma cells mimics transcriptional alterations observed in preeclamptic placentas.
Rigourd V, Chauvet C, Chelbi ST, Rebourcet R, Mondon F, Letourneur F, Mignot TM, Barbaux S, Vaiman D
PLoS One
2008,
3
:e3905
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
144.
Significance analysis of spectral count data in label-free shotgun proteomics.
Choi H, Fermin D, Nesvizhskii AI
Mol Cell Proteomics
2008 Dec,
7
:2373-85
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
145.
Label-free quantitative analysis of one-dimensional PAGE LC/MS/MS proteome: application on angiotensin II-stimulated smooth muscle cells secretome.
Gao BB, Stuart L, Feener EP
Mol Cell Proteomics
2008 Dec,
7
:2399-409
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
146.
p53-Repressed miRNAs are involved with E2F in a feed-forward loop promoting proliferation.
Brosh R, Shalgi R, Liran A, Landan G, Korotayev K, Nguyen GH, Enerly E, Johnsen H, Buganim Y, Solomon H, Goldstein I, Madar S, Goldfinger N, Børresen-Dale AL, Ginsberg D, Harris CC, Pilpel Y, Oren M, Rotter V
Mol Syst Biol
2008,
4
:229
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
147.
Genome-wide analysis reveals Sall4 to be a major regulator of pluripotency in murine-embryonic stem cells.
Yang J, Chai L, Fowles TC, Alipio Z, Xu D, Fink LM, Ward DC, Ma Y
Proc Natl Acad Sci U S A
2008 Dec 16,
105
:19756-61
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
148.
Chromatin immunoprecipitation on microarray analysis of Smad2/3 binding sites reveals roles of ETS1 and TFAP2A in transforming growth factor beta signaling.
Koinuma D, Tsutsumi S, Kamimura N, Taniguchi H, Miyazawa K, Sunamura M, Imamura T, Miyazono K, Aburatani H
Mol Cell Biol
2009 Jan,
29
:172-86
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
149.
Overexpression of myocilin in the Drosophila eye activates the unfolded protein response: implications for glaucoma.
Carbone MA, Ayroles JF, Yamamoto A, Morozova TV, West SA, Magwire MM, Mackay TF, Anholt RR
PLoS One
2009,
4
:e4216
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
150.
Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists.
Huang W, Sherman BT, Lempicki RA
Nucleic Acids Res
2009 Jan,
37
:1-13
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
151.
Differential expression of anti-angiogenic factors and guidance genes in the developing macula.
Kozulin P, Natoli R, O'Brien KM, Madigan MC, Provis JM
Mol Vis
2009,
15
:45-59
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
152.
Effects of prenatal tobacco exposure on gene expression profiling in umbilical cord tissue.
Hussain N, Krueger W, Covault J, Walsh S, Kranzler HR, Oncken C
Pediatr Res
2008 Aug,
64
:147-53
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
153.
Public databases and software for the pathway analysis of cancer genomes.
Tsui IF, Chari R, Buys TP, Lam WL
Cancer Inform
2007,
3
:379-97
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
154.
Large histone H3 lysine 9 dimethylated chromatin blocks distinguish differentiated from embryonic stem cells.
Wen B, Wu H, Shinkai Y, Irizarry RA, Feinberg AP
Nat Genet
2009 Feb,
41
:246-50
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
155.
Large-scale detection of ubiquitination substrates using cell extracts and protein microarrays.
Merbl Y, Kirschner MW
Proc Natl Acad Sci U S A
2009 Feb 24,
106
:2543-8
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
156.
Polymorphic mature microRNAs from passenger strand of pre-miR-146a contribute to thyroid cancer.
Jazdzewski K, Liyanarachchi S, Swierniak M, Pachucki J, Ringel MD, Jarzab B, de la Chapelle A
Proc Natl Acad Sci U S A
2009 Feb 3,
106
:1502-5
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
157.
The conserved NAD(H)-dependent corepressor CTBP-1 regulates Caenorhabditis elegans life span.
Chen S, Whetstine JR, Ghosh S, Hanover JA, Gali RR, Grosu P, Shi Y
Proc Natl Acad Sci U S A
2009 Feb 3,
106
:1496-501
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
158.
Modulated expression of WFDC1 during carcinogenesis and cellular senescence.
Madar S, Brosh R, Buganim Y, Ezra O, Goldstein I, Solomon H, Kogan I, Goldfinger N, Klocker H, Rotter V
Carcinogenesis
2009 Jan,
30
:20-7
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
159.
Dysregulated gene expression networks in human acute myelogenous leukemia stem cells.
Majeti R, Becker MW, Tian Q, Lee TL, Yan X, Liu R, Chiang JH, Hood L, Clarke MF, Weissman IL
Proc Natl Acad Sci U S A
2009 Mar 3,
106
:3396-401
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
160.
Effects of ciglitazone and troglitazone on the proliferation of human stomach cancer cells.
Cheon CW, Kim DH, Kim DH, Cho YH, Kim JH
World J Gastroenterol
2009 Jan 21,
15
:310-20
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
161.
Comparison of proteomic and transcriptomic profiles in the bronchial airway epithelium of current and never smokers.
Steiling K, Kadar AY, Bergerat A, Flanigon J, Sridhar S, Shah V, Ahmad QR, Brody JS, Lenburg ME, Steffen M, Spira A
PLoS One
2009,
4
:e5043
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
162.
Identification of common genetic variants that account for transcript isoform variation between human populations.
Zhang W, Duan S, Bleibel WK, Wisel SA, Huang RS, Wu X, He L, Clark TA, Chen TX, Schweitzer AC, Blume JE, Dolan ME, Cox NJ
Hum Genet
2009 Feb,
125
:81-93
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
163.
Rac1 is a critical mediator of endothelium-derived neurotrophic activity.
Sawada N, Kim HH, Moskowitz MA, Liao JK
Sci Signal
2009,
2
:ra10
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
164.
A molecular function map of Ewing's sarcoma.
Kauer M, Ban J, Kofler R, Walker B, Davis S, Meltzer P, Kovar H
PLoS One
2009,
4
:e5415
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
165.
Modulated modularity clustering as an exploratory tool for functional genomic inference.
Stone EA, Ayroles JF
PLoS Genet
2009 May,
5
:e1000479
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
166.
Natural genetic variation in transcriptome reflects network structure inferred with major effect mutations: insulin/TOR and associated phenotypes in Drosophila melanogaster.
Nuzhdin SV, Brisson JA, Pickering A, Wayne ML, Harshman LG, McIntyre LM
BMC Genomics
2009,
10
:124
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
167.
Bioinformatics resources for cancer research with an emphasis on gene function and structure prediction tools.
Kihara D, Yang YD, Hawkins T
Cancer Inform
2007,
2
:25-35
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
168.
Identification and characterization of renal cell carcinoma gene markers.
Dalgin GS, Holloway DT, Liou LS, Delisi C
Cancer Inform
2007,
3
:65-92
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
169.
Identification of candidate genes for congenital splay leg in piglets by alternative analysis of DNA microarray data.
Maak S, Boettcher D, Tetens J, Wensch-Dorendorf M, Nürnberg G, Wimmers K, Swalve HH, Thaller G
Int J Biol Sci
2009,
5
:331-7
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
170.
Association of survival and disease progression with chromosomal instability: a genomic exploration of colorectal cancer.
Sheffer M, Bacolod MD, Zuk O, Giardina SF, Pincas H, Barany F, Paty PB, Gerald WL, Notterman DA, Domany E
Proc Natl Acad Sci U S A
2009 Apr 28,
106
:7131-6
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
171.
Host cell factors in HIV replication: meta-analysis of genome-wide studies.
Bushman FD, Malani N, Fernandes J, D'Orso I, Cagney G, Diamond TL, Zhou H, Hazuda DJ, Espeseth AS, König R, Bandyopadhyay S, Ideker T, Goff SP, Krogan NJ, Frankel AD, Young JA, Chanda SK
PLoS Pathog
2009 May,
5
:e1000437
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
172.
Transcriptome-wide prediction of miRNA targets in human and mouse using FASTH.
Ragan C, Cloonan N, Grimmond SM, Zuker M, Ragan MA
PLoS One
2009,
4
:e5745
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
173.
Detection of transgenerational spermatogenic inheritance of adult male acquired CNS gene expression characteristics using a Drosophila systems model.
Sharma A, Singh P
PLoS One
2009,
4
:e5763
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
174.
A genome scan for positive selection in thoroughbred horses.
Gu J, Orr N, Park SD, Katz LM, Sulimova G, MacHugh DE, Hill EW
PLoS One
2009,
4
:e5767
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
175.
Gene expression profiling of lymphoblasts from autistic and nonaffected sib pairs: altered pathways in neuronal development and steroid biosynthesis.
Hu VW, Nguyen A, Kim KS, Steinberg ME, Sarachana T, Scully MA, Soldin SJ, Luu T, Lee NH
PLoS One
2009,
4
:e5775
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
176.
Functional genomic analysis of amniotic fluid cell-free mRNA suggests that oxidative stress is significant in Down syndrome fetuses.
Slonim DK, Koide K, Johnson KL, Tantravahi U, Cowan JM, Jarrah Z, Bianchi DW
Proc Natl Acad Sci U S A
2009 Jun 9,
106
:9425-9
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
177.
From disease ontology to disease-ontology lite: statistical methods to adapt a general-purpose ontology for the test of gene-ontology associations.
Du P, Feng G, Flatow J, Song J, Holko M, Kibbe WA, Lin SM
Bioinformatics
2009 Jun 15,
25
:i63-8
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
178.
MitoMiner, an integrated database for the storage and analysis of mitochondrial proteomics data.
Smith AC, Robinson AJ
Mol Cell Proteomics
2009 Jun,
8
:1324-37
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
179.
Gene expression signatures of a fibroblastoid preosteoblast and cuboidal osteoblast cell model compared to the MLO-Y4 osteocyte cell model.
Yang W, Harris MA, Heinrich JG, Guo D, Bonewald LF, Harris SE
Bone
2009 Jan,
44
:32-45
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
180.
Genome-wide analyses of exonic copy number variants in a family-based study point to novel autism susceptibility genes.
Bucan M, Abrahams BS, Wang K, Glessner JT, Herman EI, Sonnenblick LI, Alvarez Retuerto AI, Imielinski M, Hadley D, Bradfield JP, Kim C, Gidaya NB, Lindquist I, Hutman T, Sigman M, Kustanovich V, Lajonchere CM, Singleton A, Kim J, Wassink TH, McMahon WM, Owley T, Sweeney JA, Coon H, Nurnberger JI, Li M, Cantor RM, Minshew NJ, Sutcliffe JS, Cook EH, Dawson G, Buxbaum JD, Grant SF, Schellenberg GD, Geschwind DH, Hakonarson H
PLoS Genet
2009 Jun,
5
:e1000536
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
181.
Genetic evidence for shared mechanisms of epimorphic regeneration in zebrafish.
Qin Z, Barthel LK, Raymond PA
Proc Natl Acad Sci U S A
2009 Jun 9,
106
:9310-5
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
182.
Phenotype reversion in fetal human liver epithelial cells identifies the role of an intermediate meso-endodermal stage before hepatic maturation.
Inada M, Follenzi A, Cheng K, Surana M, Joseph B, Benten D, Bandi S, Qian H, Gupta S
J Cell Sci
2008 Apr 1,
121
:1002-13
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
183.
Molecular Signature of HPV-Induced Carcinogenesis: pRb, p53 and Gene Expression Profiling.
Buitrago-Pérez A, Garaulet G, Vázquez-Carballo A, Paramio JM, García-Escudero R
Curr Genomics
2009 Mar,
10
:26-34
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
184.
Differential gene expression patterns of EBV infected EBNA-3A positive and negative human B lymphocytes.
Hertle ML, Popp C, Petermann S, Maier S, Kremmer E, Lang R, Mages J, Kempkes B
PLoS Pathog
2009 Jul,
5
:e1000506
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
185.
A conserved CCCH-type zinc finger protein regulates mRNA nuclear adenylation and export.
Hurt JA, Obar RA, Zhai B, Farny NG, Gygi SP, Silver PA
J Cell Biol
2009 Apr 20,
185
:265-77
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
186.
Perturbation of defense pathways by low-dose arsenic exposure in zebrafish embryos.
Mattingly CJ, Hampton TH, Brothers KM, Griffin NE, Planchart A
Environ Health Perspect
2009 Jun,
117
:981-7
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
187.
Differential placental gene expression in preeclampsia.
Enquobahrie DA, Meller M, Rice K, Psaty BM, Siscovick DS, Williams MA
Am J Obstet Gynecol
2008 Nov,
199
:566.e1-11
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
188.
GeneCodis: interpreting gene lists through enrichment analysis and integration of diverse biological information.
Nogales-Cadenas R, Carmona-Saez P, Vazquez M, Vicente C, Yang X, Tirado F, Carazo JM, Pascual-Montano A
Nucleic Acids Res
2009 Jul 1,
37
:W317-22
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
189.
Pscan: finding over-represented transcription factor binding site motifs in sequences from co-regulated or co-expressed genes.
Zambelli F, Pesole G, Pavesi G
Nucleic Acids Res
2009 Jul 1,
37
:W247-52
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
190.
COFECO: composite function annotation enriched by protein complex data.
Sun CH, Kim MS, Han Y, Yi GS
Nucleic Acids Res
2009 Jul 1,
37
:W350-5
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
191.
Circadian clock genes contribute to the regulation of hair follicle cycling.
Lin KK, Kumar V, Geyfman M, Chudova D, Ihler AT, Smyth P, Paus R, Takahashi JS, Andersen B
PLoS Genet
2009 Jul,
5
:e1000573
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
192.
Transcriptional dysregulation in a transgenic model of Parkinson disease.
Yacoubian TA, Cantuti-Castelvetri I, Bouzou B, Asteris G, McLean PJ, Hyman BT, Standaert DG
Neurobiol Dis
2008 Mar,
29
:515-28
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
193.
BioNetBuilder2.0: bringing systems biology to chicken and other model organisms.
Konieczka JH, Drew K, Pine A, Belasco K, Davey S, Yatskievych TA, Bonneau R, Antin PB
BMC Genomics
2009,
10 Suppl 2
:S6
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
194.
Application of a global proteomic approach to archival precursor lesions: deleted in malignant brain tumors 1 and tissue transglutaminase 2 are upregulated in pancreatic cancer precursors.
Cheung W, Darfler MM, Alvarez H, Hood BL, Conrads TP, Habbe N, Krizman DB, Mollenhauer J, Feldmann G, Maitra A
Pancreatology
2008,
8
:608-16
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
195.
Genomic analysis of Drosophila neuronal remodeling: a role for the RNA-binding protein Boule as a negative regulator of axon pruning.
Hoopfer ED, Penton A, Watts RJ, Luo L
J Neurosci
2008 Jun 11,
28
:6092-103
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
196.
Identification of a putative network of actin-associated cytoskeletal proteins in glomerular podocytes defined by co-purified mRNAs.
Nabet B, Tsai A, Tobias JW, Carstens RP
PLoS One
2009,
4
:e6491
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
197.
Impact of the TCR signal on regulatory T cell homeostasis, function, and trafficking.
Kim JK, Klinger M, Benjamin J, Xiao Y, Erle DJ, Littman DR, Killeen N
PLoS One
2009,
4
:e6580
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
198.
Genome-wide association of hypoxia-inducible factor (HIF)-1alpha and HIF-2alpha DNA binding with expression profiling of hypoxia-inducible transcripts.
Mole DR, Blancher C, Copley RR, Pollard PJ, Gleadle JM, Ragoussis J, Ratcliffe PJ
J Biol Chem
2009 Jun 19,
284
:16767-75
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
199.
Characterization of human septic sera induced gene expression modulation in human myocytes.
Hussein S, Michael P, Brabant D, Omri A, Narain R, Passi K, Ramana CV, Parrillo JE, Kumar A, Parissenti A, Kumar A
Int J Clin Exp Med
2009,
2
:131-48
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
200.
The Drosophila foraging gene mediates adult plasticity and gene-environment interactions in behaviour, metabolites, and gene expression in response to food deprivation.
Kent CF, Daskalchuk T, Cook L, Sokolowski MB, Greenspan RJ
PLoS Genet
2009 Aug,
5
:e1000609
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
201.
Chronic dietary exposure to a low-dose mixture of genistein and vinclozolin modifies the reproductive axis, testis transcriptome, and fertility.
Eustache F, Mondon F, Canivenc-Lavier MC, Lesaffre C, Fulla Y, Berges R, Cravedi JP, Vaiman D, Auger J
Environ Health Perspect
2009 Aug,
117
:1272-9
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
202.
The organization of the transcriptional network in specific neuronal classes.
Winden KD, Oldham MC, Mirnics K, Ebert PJ, Swan CH, Levitt P, Rubenstein JL, Horvath S, Geschwind DH
Mol Syst Biol
2009,
5
:291
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
203.
Sex-specific early growth hormone response genes in rat liver.
Wauthier V, Waxman DJ
Mol Endocrinol
2008 Aug,
22
:1962-74
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
204.
Acute appendicitis is characterized by a uniform and highly selective pattern of inflammatory gene expression.
Murphy CG, Glickman JN, Tomczak K, Wang YY, Beggs AH, Shannon MW, Horwitz BH
Mucosal Immunol
2008 Jul,
1
:297-308
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
205.
Phenotype of the Cyp1a1/1a2/1b1-/- triple-knockout mouse.
Dragin N, Shi Z, Madan R, Karp CL, Sartor MA, Chen C, Gonzalez FJ, Nebert DW
Mol Pharmacol
2008 Jun,
73
:1844-56
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
206.
Increased local expression of coagulation factor X contributes to the fibrotic response in human and murine lung injury.
Scotton CJ, Krupiczojc MA, Königshoff M, Mercer PF, Lee YC, Kaminski N, Morser J, Post JM, Maher TM, Nicholson AG, Moffatt JD, Laurent GJ, Derian CK, Eickelberg O, Chambers RC
J Clin Invest
2009 Sep,
119
:2550-63
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
207.
Conserved expression patterns predict microRNA targets.
Ritchie W, Rajasekhar M, Flamant S, Rasko JE
PLoS Comput Biol
2009 Sep,
5
:e1000513
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
208.
Network integration and graph analysis in mammalian molecular systems biology.
Ma'ayan A
IET Syst Biol
2008 Sep,
2
:206-21
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
209.
Global transcriptional response to Hfe deficiency and dietary iron overload in mouse liver and duodenum.
Rodriguez A, Luukkaala T, Fleming RE, Britton RS, Bacon BR, Parkkila S
PLoS One
2009,
4
:e7212
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
210.
Identification of discriminating biomarkers for human disease using integrative network biology.
Dudley JT, Butte AJ
Pac Symp Biocomput
2009,
:27-38
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
211.
Transcriptional profiling of rats subjected to gestational undernourishment: implications for the developmental variations in metabolic traits.
Morris TJ, Vickers M, Gluckman P, Gilmour S, Affara N
PLoS One
2009,
4
:e7271
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
212.
Systems genetics of complex traits in Drosophila melanogaster.
Ayroles JF, Carbone MA, Stone EA, Jordan KW, Lyman RF, Magwire MM, Rollmann SM, Duncan LH, Lawrence F, Anholt RR, Mackay TF
Nat Genet
2009 Mar,
41
:299-307
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
213.
Unique patterns of molecular profiling between human prostate cancer LNCaP and PC-3 cells.
Dozmorov MG, Hurst RE, Culkin DJ, Kropp BP, Frank MB, Osban J, Penning TM, Lin HK
Prostate
2009 Jul 1,
69
:1077-90
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
214.
Stemming cancer: functional genomics of cancer stem cells in solid tumors.
Regenbrecht CR, Lehrach H, Adjaye J
Stem Cell Rev
2008 Dec,
4
:319-28
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
215.
Oxidative stress and longevity in Caenorhabditis elegans as mediated by SKN-1.
Park SK, Tedesco PM, Johnson TE
Aging Cell
2009 Jun,
8
:258-69
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
216.
alpha- and gamma-Tocopherol prevent age-related transcriptional alterations in the heart and brain of mice.
Park SK, Page GP, Kim K, Allison DB, Meydani M, Weindruch R, Prolla TA
J Nutr
2008 Jun,
138
:1010-8
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
217.
Genome-level expression profiles in pediatric septic shock indicate a role for altered zinc homeostasis in poor outcome.
Wong HR, Shanley TP, Sakthivel B, Cvijanovich N, Lin R, Allen GL, Thomas NJ, Doctor A, Kalyanaraman M, Tofil NM, Penfil S, Monaco M, Tagavilla MA, Odoms K, Dunsmore K, Barnes M, Aronow BJ, Genomics of Pediatric SIRS/Septic Shock Investigators
Physiol Genomics
2007 Jul 18,
30
:146-55
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
218.
Mining gene functional networks to improve mass-spectrometry-based protein identification.
Ramakrishnan SR, Vogel C, Kwon T, Penalva LO, Marcotte EM, Miranker DP
Bioinformatics
2009 Nov 15,
25
:2955-61
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
219.
Exon array analysis of head and neck cancers identifies a hypoxia related splice variant of LAMA3 Associated with a poor prognosis.
Moller-Levet CS, Betts GN, Harris AL, Homer JJ, West CM, Miller CJ
PLoS Comput Biol
2009 Nov,
5
:e1000571
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
220.
Correlating global gene regulation to angiogenesis in the developing chick extra-embryonic vascular system.
Javerzat S, Franco M, Herbert J, Platonova N, Peille AL, Pantesco V, De Vos J, Assou S, Bicknell R, Bikfalvi A, Hagedorn M
PLoS One
2009,
4
:e7856
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
221.
Discovery and annotation of functional chromatin signatures in the human genome.
Hon G, Wang W, Ren B
PLoS Comput Biol
2009 Nov,
5
:e1000566
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
222.
Alternative splicing and transcriptome profiling of experimental autoimmune encephalomyelitis using genome-wide exon arrays.
Gillett A, Maratou K, Fewings C, Harris RA, Jagodic M, Aitman T, Olsson T
PLoS One
2009,
4
:e7773
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
223.
Gene expression profiling during early acute febrile stage of dengue infection can predict the disease outcome.
Nascimento EJ, Braga-Neto U, Calzavara-Silva CE, Gomes AL, Abath FG, Brito CA, Cordeiro MT, Silva AM, Magalhães C, Andrade R, Gil LH, Marques ET
PLoS One
2009,
4
:e7892
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
224.
Global gene expression profiling of ischemic preconditioning in the rat retina.
Kamphuis W, Dijk F, van Soest S, Bergen AA
Mol Vis
2007,
13
:1020-30
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
225.
Condition-adapted stress and longevity gene regulation by Caenorhabditis elegans SKN-1/Nrf.
Oliveira RP, Porter Abate J, Dilks K, Landis J, Ashraf J, Murphy CT, Blackwell TK
Aging Cell
2009 Sep,
8
:524-41
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
226.
SimCT: a generic tool to visualize ontology-based relationships for biological objects.
Herrmann C, Bérard S, Tichit L
Bioinformatics
2009 Dec 1,
25
:3197-8
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
227.
Integration of heterogeneous expression data sets extends the role of the retinol pathway in diabetes and insulin resistance.
Park PJ, Kong SW, Tebaldi T, Lai WR, Kasif S, Kohane IS
Bioinformatics
2009 Dec 1,
25
:3121-7
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
228.
Blocking the metabolism of starch breakdown products in Arabidopsis leaves triggers chloroplast degradation.
Stettler M, Eicke S, Mettler T, Messerli G, Hörtensteiner S, Zeeman SC
Mol Plant
2009 Nov,
2
:1233-46
[
PubMed Central
]
[
PubMed
]
[
Related articles
]
This article is also cited by
165 articles
in BioMed Central
printer friendly
20 per page
50 per page
200 per page
500 per page
selected items
abstract
no abstract
any time period
7 Days
14 Days
30 Days
60 Days
90 Days
180 Days
1 Year
all 228 results
this page
selected items
to
Endnote (no abstracts)
Endnote + abstracts
Ref. Manager (no abstracts)
Ref. Manager + abstracts
RefWorks (no abstracts)
RefWorks + abstracts
BibTeX (no abstracts)
BibTeX + abstracts
ProCite (no abstracts)
ProCite + abstracts
[
Help
]
Terms and Conditions
Privacy statement
Information for advertisers
Jobs at BMC
Contact us
© 1999-2009 BioMed Central Ltd unless otherwise stated. Part of
Springer Science+Business Media
.