Log on / register
Feedback | Support | My details
Statistical tests for differential expression in cDNA microarray experiments.
Cui X, Churchill GA
Genome Biol 2003, 4:210
[Full text] [PubMed] [Related articles] [Cited on BioMed Central]


printer friendly 
to  [Help]

PubMed Central articles that cite the above article:

1.
Intensity-based analysis of two-colour microarrays enables efficient and flexible hybridization designs.
't Hoen PA, Turk R, Boer JM, Sterrenburg E, de Menezes RX, van Ommen GJ, den Dunnen JT
Nucleic Acids Res 2004, 32:e41
 [PubMed Central] [PubMed] [Related articles]
2.
A conserved transcript pattern in response to a specialist and a generalist herbivore.
Reymond P, Bodenhausen N, Van Poecke RM, Krishnamurthy V, Dicke M, Farmer EE
Plant Cell 2004 Nov, 16:3132-47
 [PubMed Central] [PubMed] [Related articles]
3.
Analysis of oligonucleotide array experiments with repeated measures using mixed models.
Li H, Wood CL, Getchell TV, Getchell ML, Stromberg AJ
BMC Bioinformatics 2004, 5:209
 [PubMed Central] [PubMed] [Related articles]
4.
Organ-specific expression of Arabidopsis genome during development.
Ma L, Sun N, Liu X, Jiao Y, Zhao H, Deng XW
Plant Physiol 2005 May, 138:80-91
 [PubMed Central] [PubMed] [Related articles]
5.
Using microarrays to facilitate positional cloning: identification of tomosyn as an inhibitor of neurosecretion.
Dybbs M, Ngai J, Kaplan JM
PLoS Genet 2005 Jul, 1:6-16
 [PubMed Central] [PubMed] [Related articles]
6.
A global survey of gene regulation during cold acclimation in Arabidopsis thaliana.
Hannah MA, Heyer AG, Hincha DK
PLoS Genet 2005 Aug, 1:e26
 [PubMed Central] [PubMed] [Related articles]
7.
*** Unable to retrieve article 16121258 ***

 [PubMed Central] [PubMed] [Related articles]
8.
Significance analysis of time course microarray experiments.
Storey JD, Xiao W, Leek JT, Tompkins RG, Davis RW
Proc Natl Acad Sci U S A 2005 Sep 6, 102:12837-42
 [PubMed Central] [PubMed] [Related articles]
9.
Phenotypic anchoring of gene expression changes during estrogen-induced uterine growth.
Moggs JG, Tinwell H, Spurway T, Chang HS, Pate I, Lim FL, Moore DJ, Soames A, Stuckey R, Currie R, Zhu T, Kimber I, Ashby J, Orphanides G
Environ Health Perspect 2004 Nov, 112:1589-606
 [PubMed Central] [PubMed] [Related articles]
10.
Platelet genomics and proteomics in human health and disease.
Macaulay IC, Carr P, Gusnanto A, Ouwehand WH, Fitzgerald D, Watkins NA
J Clin Invest 2005 Dec, 115:3370-7
 [PubMed Central] [PubMed] [Related articles]
11.
A two-sample Bayesian t-test for microarray data.
Fox RJ, Dimmic MW
BMC Bioinformatics 2006, 7:126
 [PubMed Central] [PubMed] [Related articles]
12.
Next station in microarray data analysis: GEPAS.
Montaner D, Tárraga J, Huerta-Cepas J, Burguet J, Vaquerizas JM, Conde L, Minguez P, Vera J, Mukherjee S, Valls J, Pujana MA, Alloza E, Herrero J, Al-Shahrour F, Dopazo J
Nucleic Acids Res 2006 Jul 1, 34:W486-91
 [PubMed Central] [PubMed] [Related articles]
13.
Transcriptional profile of Haemophilus influenzae: effects of iron and heme.
Whitby PW, Vanwagoner TM, Seale TW, Morton DJ, Stull TL
J Bacteriol 2006 Aug, 188:5640-5
 [PubMed Central] [PubMed] [Related articles]
14.
Unraveling the dynamic transcriptome.
Brady SM, Long TA, Benfey PN
Plant Cell 2006 Sep, 18:2101-11
 [PubMed Central] [PubMed] [Related articles]
15.
Analysis of pleiotropic transcriptional profiles: a case study of DNA gyrase inhibition.
Jeong KS, Xie Y, Hiasa H, Khodursky AB
PLoS Genet 2006 Sep 29, 2:e152
 [PubMed Central] [PubMed] [Related articles]
16.
Genomic dissection of behavioral maturation in the honey bee.
Whitfield CW, Ben-Shahar Y, Brillet C, Leoncini I, Crauser D, Leconte Y, Rodriguez-Zas S, Robinson GE
Proc Natl Acad Sci U S A 2006 Oct 31, 103:16068-75
 [PubMed Central] [PubMed] [Related articles]
17.
Impact of AtNHX1, a vacuolar Na+/H+ antiporter, upon gene expression during short- and long-term salt stress in Arabidopsis thaliana.
Sottosanto JB, Saranga Y, Blumwald E
BMC Plant Biol 2007, 7:18
 [PubMed Central] [PubMed] [Related articles]
18.
Effect of 21 different nitrogen sources on global gene expression in the yeast Saccharomyces cerevisiae.
Godard P, Urrestarazu A, Vissers S, Kontos K, Bontempi G, van Helden J, André B
Mol Cell Biol 2007 Apr, 27:3065-86
 [PubMed Central] [PubMed] [Related articles]
19.
PathExpress: a web-based tool to identify relevant pathways in gene expression data.
Goffard N, Weiller G
Nucleic Acids Res 2007 Jul, 35:W176-81
 [PubMed Central] [PubMed] [Related articles]
20.
Transcriptome profiling and functional analysis of Agrobacterium tumefaciens reveals a general conserved response to acidic conditions (pH 5.5) and a complex acid-mediated signaling involved in Agrobacterium-plant interactions.
Yuan ZC, Liu P, Saenkham P, Kerr K, Nester EW
J Bacteriol 2008 Jan, 190:494-507
 [PubMed Central] [PubMed] [Related articles]
21.
A comparison of cDNA, oligonucleotide, and Affymetrix GeneChip gene expression microarray platforms.
Woo Y, Affourtit J, Daigle S, Viale A, Johnson K, Naggert J, Churchill G
J Biomol Tech 2004 Dec, 15:276-84
 [PubMed Central] [PubMed] [Related articles]
22.
Bayesian mixture model analysis for detecting differentially expressed genes.
Jia Z, Xu S
Int J Plant Genomics 2008, 2008:892927
 [PubMed Central] [PubMed] [Related articles]
23.
Complex genetic interactions underlying expression differences between Drosophila races: analysis of chromosome substitutions.
Wang HY, Fu Y, McPeek MS, Lu X, Nuzhdin S, Xu A, Lu J, Wu ML, Wu CI
Proc Natl Acad Sci U S A 2008 Apr 29, 105:6362-7
 [PubMed Central] [PubMed] [Related articles]
24.
Genome-wide transcriptional responses of Escherichia coli K-12 to continuous osmotic and heat stresses.
Gunasekera TS, Csonka LN, Paliy O
J Bacteriol 2008 May, 190:3712-20
 [PubMed Central] [PubMed] [Related articles]
25.
Meta-analysis combines affymetrix microarray results across laboratories.
Stevens JR, Doerge RW
Comp Funct Genomics 2005, 6:116-22
 [PubMed Central] [PubMed] [Related articles]
26.
Pervasive sex-linked effects on transcription regulation as revealed by expression quantitative trait loci mapping in lake whitefish species pairs (Coregonus sp., Salmonidae).
Derome N, Bougas B, Rogers SM, Whiteley AR, Labbe A, Laroche J, Bernatchez L
Genetics 2008 Aug, 179:1903-17
 [PubMed Central] [PubMed] [Related articles]
27.
The phenomics and expression quantitative trait locus mapping of brain transcriptomes regulating adaptive divergence in lake whitefish species pairs (Coregonus sp.).
Whiteley AR, Derome N, Rogers SM, St-Cyr J, Laroche J, Labbe A, Nolte A, Renaut S, Jeukens J, Bernatchez L
Genetics 2008 Sep, 180:147-64
 [PubMed Central] [PubMed] [Related articles]
28.
Ranking analysis of microarray data: a powerful method for identifying differentially expressed genes.
Tan YD, Fornage M, Fu YX
Genomics 2006 Dec, 88:846-54
 [PubMed Central] [PubMed] [Related articles]

This article is also cited by 31 articles in BioMed Central


You can also check ISI Web of Science for additional citations (subscription required)
  
printer friendly 
to  [Help]
Terms and Conditions Privacy statement Information for advertisers Jobs at BMC Contact us
© 1999-2008 BioMed Central Ltd unless otherwise stated. Part of Springer Science+Business Media.