BioMed Central | Articles which cite: Design and implementation of microarray gene expression markup language (MAGE-ML).

Log on / register
Feedback | Support | My details

home journals A-Z subject areas advanced search authors reviewers libraries about my BioMed Central

Design and implementation of microarray gene expression markup language (MAGE-ML).
Spellman PT, Miller M, Stewart J, Troup C, Sarkans U, Chervitz S, Bernhart D, Sherlock G, Ball C, Lepage M, Swiatek M, Marks WL, Goncalves J, Markel S, Iordan D, Shojatalab M, Pizarro A, White J, Hubley R, Deutsch E, Senger M, Aronow BJ, Robinson A, Bassett D, Stoeckert CJ, Brazma A
Genome Biol 2002 Aug 23, 3:RESEARCH0046
[Full text] [PubMed] [Related articles] [Cited on BioMed Central]

printer friendly

to [Help]

PubMed Central articles that cite the above article:

1.	The Stanford Microarray Database: data access and quality assessment tools. Gollub J, Ball CA, Binkley G, Demeter J, Finkelstein DB, Hebert JM, Hernandez-Boussard T, Jin H, Kaloper M, Matese JC, Schroeder M, Brown PO, Botstein D, Sherlock G Nucleic Acids Res 2003 Jan 1, 31:94-6 [PubMed Central] [PubMed] [Related articles]
2.	Feature extraction and signal processing for nylon DNA microarrays. Lopez F, Rougemont J, Loriod B, Bourgeois A, Loï L, Bertucci F, Hingamp P, Houlgatte R, Granjeaud S BMC Genomics 2004 Jun 29, 5:38 [PubMed Central] [PubMed] [Related articles]
3.	Submission of microarray data to public repositories. Ball CA, Brazma A, Causton H, Chervitz S, Edgar R, Hingamp P, Matese JC, Parkinson H, Quackenbush J, Ringwald M, Sansone SA, Sherlock G, Spellman P, Stoeckert C, Tateno Y, Taylor R, White J, Winegarden N PLoS Biol 2004 Sep, 2:E317 [PubMed Central] [PubMed] [Related articles]
4.	PEDRo: a database for storing, searching and disseminating experimental proteomics data. Garwood K, McLaughlin T, Garwood C, Joens S, Morrison N, Taylor CF, Carroll K, Evans C, Whetton AD, Hart S, Stead D, Yin Z, Brown AJ, Hesketh A, Chater K, Hansson L, Mewissen M, Ghazal P, Howard J, Lilley KS, Gaskell SJ, Brass A, Hubbard SJ, Oliver SG, Paton NW BMC Genomics 2004 Sep 17, 5:68 [PubMed Central] [PubMed] [Related articles]
5.	MARS: microarray analysis, retrieval, and storage system. Maurer M, Molidor R, Sturn A, Hartler J, Hackl H, Stocker G, Prokesch A, Scheideler M, Trajanoski Z BMC Bioinformatics 2005, 6:101 [PubMed Central] [PubMed] [Related articles]
6.	Genome informatics: current status and future prospects. Winslow RL, Boguski MS Circ Res 2003 May 16, 92:953-61 [PubMed Central] [PubMed] [Related articles]
7.	Database development in toxicogenomics: issues and efforts. Mattes WB, Pettit SD, Sansone SA, Bushel PR, Waters MD Environ Health Perspect 2004 Mar, 112:495-505 [PubMed Central] [PubMed] [Related articles]
8.	Standards for microarray data: an open letter. Ball C, Brazma A, Causton H, Chervitz S, Edgar R, Hingamp P, Matese JC, Parkinson H, Quackenbush J, Ringwald M, Sansone SA, Sherlock G, Spellman P, Stoeckert C, Tateno Y, Taylor R, White J, Winegarden N, MGED Society Environ Health Perspect 2004 Aug, 112:A666-7 [PubMed Central] [PubMed] [Related articles]
9.	MiMiR: a comprehensive solution for storage, annotation and exchange of microarray data. Navarange M, Game L, Fowler D, Wadekar V, Banks H, Cooley N, Rahman F, Hinshelwood J, Broderick P, Causton HC BMC Bioinformatics 2005, 6:268 [PubMed Central] [PubMed] [Related articles]
10.	MeMo: a hybrid SQL/XML approach to metabolomic data management for functional genomics. Spasi I, Dunn WB, Velarde G, Tseng A, Jenkins H, Hardy N, Oliver SG, Kell DB BMC Bioinformatics 2006, 7:281 [PubMed Central] [PubMed] [Related articles]
11.	Integrating microarray gene expression object model and clinical document architecture for cancer genomics research. Park YR, Lee HW, Kim JH AMIA Annu Symp Proc 2005, :1073 [PubMed Central] [PubMed] [Related articles]
12.	Gene expression omnibus: microarray data storage, submission, retrieval, and analysis. Barrett T, Edgar R Methods Enzymol 2006, 411:352-69 [PubMed Central] [PubMed] [Related articles]
13.	Model-driven user interfaces for bioinformatics data resources: regenerating the wheel as an alternative to reinventing it. Garwood K, Garwood C, Hedeler C, Griffiths T, Swainston N, Oliver SG, Paton NW BMC Bioinformatics 2006, 7:532 [PubMed Central] [PubMed] [Related articles]
14.	The Stanford Microarray Database: implementation of new analysis tools and open source release of software. Demeter J, Beauheim C, Gollub J, Hernandez-Boussard T, Jin H, Maier D, Matese JC, Nitzberg M, Wymore F, Zachariah ZK, Brown PO, Sherlock G, Ball CA Nucleic Acids Res 2007 Jan, 35:D766-70 [PubMed Central] [PubMed] [Related articles]
15.	From bytes to bedside: data integration and computational biology for translational cancer research. Mathew JP, Taylor BS, Bader GD, Pyarajan S, Antoniotti M, Chinnaiyan AM, Sander C, Burakoff SJ, Mishra B PLoS Comput Biol 2007 Feb 23, 3:e12 [PubMed Central] [PubMed] [Related articles]
16.	Sharing detailed research data is associated with increased citation rate. Piwowar HA, Day RS, Fridsma DB PLoS One 2007, 2:e308 [PubMed Central] [PubMed] [Related articles]
17.	DNA microarrays: a powerful genomic tool for biomedical and clinical research. Trevino V, Falciani F, Barrera-Saldaña HA Mol Med 2007 Sep-Oct, 13:527-41 [PubMed Central] [PubMed] [Related articles]
18.	* Unable to retrieve article 17660860 * [PubMed Central] [PubMed] [Related articles]
19.	The XBabelPhish MAGE-ML and XML translator. Maier D, Wymore F, Sherlock G, Ball CA BMC Bioinformatics 2008, 9:28 [PubMed Central] [PubMed] [Related articles]
20.	Celsius: a community resource for Affymetrix microarray data. Day A, Carlson MR, Dong J, O'Connor BD, Nelson SF Genome Biol 2007, 8:R112 [PubMed Central] [PubMed] [Related articles]
21.	The MGED Ontology: A Framework for Describing Functional Genomics Experiments. Stoeckert CJ, Parkinson H Comp Funct Genomics 2003, 4:127-32 [PubMed Central] [PubMed] [Related articles]
22.	Standardization Initiatives in the (eco)toxicogenomics Domain: A Review. Sansone SA, Morrison N, Rocca-Serra P, Fostel J Comp Funct Genomics 2004, 5:633-41 [PubMed Central] [PubMed] [Related articles]
23.	ebTrack: an environmental bioinformatics system built upon ArrayTrack. Chen M, Martin J, Fang H, Isukapalli S, Georgopoulos PG, Welsh WJ, Tong W BMC Proc 2009, 3 Suppl 2:S5 [PubMed Central] [PubMed] [Related articles]
24.	TRUNCATULIX--a data warehouse for the legume community. Henckel K, Runte KJ, Bekel T, Dondrup M, Jakobi T, Küster H, Goesmann A BMC Plant Biol 2009, 9:19 [PubMed Central] [PubMed] [Related articles]
25.	Modeling genomic data with type attributes, balancing stability and maintainability. Busch N, Wedemann G BMC Bioinformatics 2009, 10:97 [PubMed Central] [PubMed] [Related articles]
26.	Creation and implications of a phenome-genome network. Butte AJ, Kohane IS Nat Biotechnol 2006 Jan, 24:55-62 [PubMed Central] [PubMed] [Related articles]
27.	Systems integration of biodefense omics data for analysis of pathogen-host interactions and identification of potential targets. McGarvey PB, Huang H, Mazumder R, Zhang J, Chen Y, Zhang C, Cammer S, Will R, Odle M, Sobral B, Moore M, Wu CH PLoS One 2009, 4:e7162 [PubMed Central] [PubMed] [Related articles]

This article is also cited by 30 articles in BioMed Central

printer friendly

to [Help]

Terms and Conditions Privacy statement Information for advertisers Jobs at BMC Contact us