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CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment.
Manavski SA, Valle G
BMC Bioinformatics
2008,
9 Suppl 2
:S10
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BioMed Central articles that cite the above article:
1.
Technical Note
CUDASW++: optimizing Smith-Waterman sequence database searches for CUDA-enabled graphics processing units
Liu Y, Maskell DL, Schmidt B
BMC Research Notes
2009,
2
:73
(6 May 2009)
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2.
Technical Note
SWPS3
fast multi-threaded vectorized Smith-Waterman for IBM Cell/B.E. and ×86/SSE2
Szalkowski A, Ledergerber C, Krähenbühl P, Dessimoz C
BMC Research Notes
2008,
1
:107
(29 October 2008)
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3.
Software
CBESW: Sequence Alignment on the Playstation 3
Wirawan A, Kwoh CK, Hieu NT, Schmidt B
BMC Bioinformatics
2008,
9
:377
(17 September 2008)
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