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A comprehensive re-analysis of the Golden Spike data: towards a benchmark for differential expression methods.
Pearson RD
BMC Bioinformatics
2008,
9
:164
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BioMed Central articles that cite the above article:
1.
Methodology article
A first principles approach to differential expression in microarray data analysis
Rubin RA
BMC Bioinformatics
2009,
10
:292
(16 September 2009)
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2.
Software
puma: a Bioconductor package for propagating uncertainty in microarray analysis
Pearson RD, Liu X, Sanguinetti G, Milo M, Lawrence ND, Rattray M
BMC Bioinformatics
2009,
10
:211
(9 July 2009)
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Research
Ranking differentially expressed genes from Affymetrix gene expression data: methods with reproducibility, sensitivity, and specificity
Kadota K, Nakai Y, Shimizu K
Algorithms for Molecular Biology
2009,
4
:7
(22 April 2009)
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Methodology article
Bayesian optimal discovery procedure for simultaneous significance testing
Cao J, Xie XJ, Zhang S, Whitehurst A, White MA
BMC Bioinformatics
2009,
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:5
(6 January 2009)
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5.
Methodology article
Background correction using dinucleotide affinities improves the performance of GCRMA
Gharaibeh RZ, Fodor AA, Gibas CJ
BMC Bioinformatics
2008,
9
:452
(23 October 2008)
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