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Clustering of genes into regulons using integrated modeling-COGRIM.
Chen G, Jensen ST, Stoeckert CJ
Genome Biol
2007,
8
:R4
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BioMed Central articles that cite the above article:
1.
Research article
Transcriptional programs: Modelling higher order structure in transcriptional control
Reid JE, Ott S, Wernisch L
BMC Bioinformatics
2009,
10
:218
(16 July 2009)
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Comparative analysis of module-based versus direct methods for reverse-engineering transcriptional regulatory networks
Michoel T, De Smet R, Joshi A, Van de Peer Y, Marchal K
BMC Systems Biology
2009,
3
:49
(7 May 2009)
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3.
Method
DISTILLER: a data integration framework to reveal condition dependency of complex regulons in
Escherichia coli
Lemmens K, De Bie T, Dhollander T, De Keersmaecker SC, Thijs IM, Schoofs G, De Weerdt A, De Moor B, Vanderleyden J, Collado-Vides J, Engelen K, Marchal K
Genome Biology
2009,
10
:R27
(6 March 2009)
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Research
Systems biology-defined NF-
B regulons, interacting signal pathways and networks are implicated in the malignant phenotype of head and neck cancer cell lines differing in p53 status
Yan B, Chen G, Saigal K, Yang X, Jensen ST, Van Waes C, Stoeckert CJ, Chen Z
Genome Biology
2008,
9
:R53
(11 March 2008)
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5.
Method
High-resolution analysis of condition-specific regulatory modules in
Saccharomyces cerevisiae
Lee HG, Lee HS, Jeon SH, Chung TH, Lim YS, Huh WK
Genome Biology
2008,
9
:R2
(3 January 2008)
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In situ analysis of cross-hybridisation on microarrays and the inference of expression correlation
Casneuf T, Van de Peer Y, Huber W
BMC Bioinformatics
2007,
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:461
(26 November 2007)
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Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
Liu X, Jessen WJ, Sivaganesan S, Aronow BJ, Medvedovic M
BMC Bioinformatics
2007,
8
:283
(3 August 2007)
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