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Analysis of the prostate cancer cell line LNCaP transcriptome using a sequencing-by-synthesis approach.
Bainbridge MN, Warren RL, Hirst M, Romanuik T, Zeng T, Go A, Delaney A, Griffith M, Hickenbotham M, Magrini V, Mardis ER, Sadar MD, Siddiqui AS, Marra MA, Jones SJ
BMC Genomics 2006, 7:246
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Comparison of next generation sequencing technologies for transcriptome characterization
Wall PK, Leebens-Mack J, Chanderbali AS, Barakat A, Wolcott E, Liang H, Landherr L, Tomsho LP, Hu Y, Carlson JE, Ma H, Schuster SC, Soltis DE, Soltis PS, Altman N, dePamphilis CW
BMC Genomics 2009, 10:347 (1 August 2009)
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Transcriptome sequencing of the Microarray Quality Control (MAQC) RNA reference samples using next generation sequencing
Mane SP, Evans C, Cooper KL, Crasta OR, Folkerts O, Hutchison SK, Harkins TT, Thierry-Mieg D, Thierry-Mieg J, Jensen RV
BMC Genomics 2009, 10:264 (12 June 2009)
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Transcriptome analysis for Caenorhabditis elegans based on novel expressed sequence tags
Shin H, Hirst M, Bainbridge MN, Magrini V, Mardis E, Moerman DG, Marra MA, Baillie DL, Jones SJM
BMC Biology 2008, 6:30 (8 July 2008)
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Using RNase sequence specificity to refine the identification of RNA-protein binding regions
Wang X, Wang G, Shen C, Li L, Wang X, Mooney SD, Edenberg HJ, Sanford JR, Liu Y
BMC Genomics 2008, 9(Suppl 1):S17 (20 March 2008)
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Simcluster: clustering enumeration gene expression data on the simplex space
Vêncio RZN, Varuzza L, de B Pereira CA, Brentani H, Shmulevich I
BMC Bioinformatics 2007, 8:246 (11 July 2007)
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Novel expressed sequences identified in a model of androgen independent prostate cancer
Quayle SN, Hare H, Delaney AD, Hirst M, Hwang D, Schein JE, Jones SJM, Marra MA, Sadar MD
BMC Genomics 2007, 8:32 (26 January 2007)
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