Log on / register
Feedback | Support | My details
Relations in biomedical ontologies.
Smith B, Ceusters W, Klagges B, Köhler J, Kumar A, Lomax J, Mungall C, Neuhaus F, Rector AL, Rosse C
Genome Biol 2005, 6:R46
[Full text] [PubMed] [Related articles] [Cited on BioMed Central]


printer friendly 
to  [Help]

BioMed Central articles that cite the above article:

1.


Research    
BioGateway: a semantic systems biology tool for the life sciences
Antezana E, Blondé W, Egaña M, Rutherford A, Stevens R, De Baets B, Mironov V, Kuiper M
BMC Bioinformatics 2009, 10(Suppl 10):S11 (1 October 2009)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles]
2.


Software    
The Cell Cycle Ontology: an application ontology for the representation and integrated analysis of the cell cycle process
Antezana E, Egaña M, Blondé W, Illarramendi A, Bilbao I, De Baets B, Stevens R, Mironov V, Kuiper M
Genome Biology 2009, 10:R58 (29 May 2009)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles]
3.


Proceedings    
TGF-beta signaling proteins and the Protein Ontology
Arighi CN, Liu H, Natale DA, Barker WC, Drabkin H, Blake JA, Smith B, Wu CH
BMC Bioinformatics 2009, 10(Suppl 5):S3 (6 May 2009)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles]
4.


Research article    
An improved ontological representation of dendritic cells as a paradigm for all cell types
Masci AM, Arighi CN, Diehl AD, Lieberman AE, Mungall C, Scheuermann RH, Smith B, Cowell LG
BMC Bioinformatics 2009, 10:70 (25 February 2009)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central] [1 comment]
5.


Proceedings    
Ontological analysis of SNOMED CT
Héja G, Surján G, Varga P
BMC Medical Informatics and Decision Making 2008, 8(Suppl 1):S8 (27 October 2008)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles]
6.


Proceedings    
Formal representation of complex SNOMED CT expressions
Schulz S, Markó K, Suntisrivaraporn B
BMC Medical Informatics and Decision Making 2008, 8(Suppl 1):S9 (27 October 2008)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles]
7.


Software    
OntoDas a tool for facilitating the construction of complex queries to the Gene Ontology
O'Neill K, Garcia A, Schwegmann A, Jimenez RC, Jacobson D, Hermjakob H
BMC Bioinformatics 2008, 9:437 (16 October 2008)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles]
8.


Research    
Drug interaction prediction using ontology-driven hypothetical assertion framework for pathway generation followed by numerical simulation
Arikuma T, Yoshikawa S, Azuma R, Watanabe K, Matsumura K, Konagaya A
BMC Bioinformatics 2008, 9(Suppl 6):S11 (28 May 2008)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
9.


Proceedings    
Ontology Design Patterns for bio-ontologies: a case study on the Cell Cycle Ontology
Aranguren ME, Antezana E, Kuiper M, Stevens R
BMC Bioinformatics 2008, 9(Suppl 5):S1 (29 April 2008)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
10.


Research    
Ontology-based, Tissue MicroArray oriented, image centered tissue bank
Viti F, Merelli I, Caprera A, Lazzari B, Stella A, Milanesi L
BMC Bioinformatics 2008, 9(Suppl 4):S4 (25 April 2008)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
11.


Research    
RDFScape: Semantic Web meets Systems Biology
Splendiani A
BMC Bioinformatics 2008, 9(Suppl 4):S6 (25 April 2008)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
12.


Methodology article    
An anatomy ontology to represent biological knowledge in Dictyostelium discoideum
Gaudet P, Williams JG, Fey P, Chisholm RL
BMC Genomics 2008, 9:130 (18 March 2008)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles]
13.


Methodology article    
Defining functional distances over Gene Ontology
del Pozo A, Pazos F, Valencia A
BMC Bioinformatics 2008, 9:50 (25 January 2008)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
14.


Research article    
Corpus annotation for mining biomedical events from literature
Kim JD, Ohta T, Tsujii J
BMC Bioinformatics 2008, 9:10 (8 January 2008)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
15.




Proceedings    
Framework for a Protein Ontology
Natale DA, Arighi CN, Barker WC, Blake J, Chang TC, Hu Z, Liu H, Smith B, Wu CH
BMC Bioinformatics 2007, 8(Suppl 9):S1 (27 November 2007)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [F1000 Biology] [Cited on BioMed Central]
16.


Method    
Simplified ontologies allowing comparison of developmental mammalian gene expression
Kruger A, Hofmann O, Carninci P, Hayashizaki Y, Hide W
Genome Biology 2007, 8:R229 (25 October 2007)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
17.


Methodology article    
Representing default knowledge in biomedical ontologies: application to the integration of anatomy and phenotype ontologies
Hoehndorf R, Loebe F, Kelso J, Herre H
BMC Bioinformatics 2007, 8:377 (9 October 2007)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
18.


Research article    
Spatial location and its relevance for terminological inferences in bio-ontologies
Schulz S, Markó K, Hahn U
BMC Bioinformatics 2007, 8:134 (20 April 2007)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles]
19.


Commentary    
Understanding and using the meaning of statements in a bio-ontology: recasting the Gene Ontology in OWL
Aranguren ME, Bechhofer S, Lord P, Sattler U, Stevens R
BMC Bioinformatics 2007, 8:57 (20 February 2007)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
20.


Proceedings    
A critical review of PASBio's argument structures for biomedical verbs
Cohen KB, Hunter L
BMC Bioinformatics 2006, 7(Suppl 3):S5 (24 November 2006)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
21.


Methodology article    
The use of concept maps during knowledge elicitation in ontology development processes the nutrigenomics use case
Castro AG, Rocca-Serra P, Stevens R, Taylor C, Nashar K, Ragan MA, Sansone SA
BMC Bioinformatics 2006, 7:267 (25 May 2006)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
22.


Methodology article    
Quality control for terms and definitions in ontologies and taxonomies
Köhler J, Munn K, Rüegg A, Skusa A, Smith B
BMC Bioinformatics 2006, 7:212 (19 April 2006)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

This article is also cited by a further 29 articles in PubMed Central


You can also check ISI Web of Science for additional citations (subscription required)
  
printer friendly 
to  [Help]
Terms and Conditions Privacy statement Information for advertisers Jobs at BMC Contact us
© 1999-2009 BioMed Central Ltd unless otherwise stated. Part of Springer Science+Business Media.