Log on / register
Feedback | Support | My details
Complete reannotation of the Arabidopsis genome: methods, tools, protocols and the final release.
Haas BJ, Wortman JR, Ronning CM, Hannick LI, Smith RK, Maiti R, Chan AP, Yu C, Farzad M, Wu D, White O, Town CD
BMC Biol 2005, 3:7
[Full text] [PubMed] [Related articles] [Cited on BioMed Central]


printer friendly 
to  [Help]

BioMed Central articles that cite the above article:

1.


Research article    
Sequenced BAC anchored reference genetic map that reconciles the ten individual chromosomes of Brassica rapa
Kim HR, Choi SR, Bae J, Hong CP, Lee SY, Hossain MJ, Van Nguyen D, Jin M, Park BS, Bang JW, Bancroft I, Lim YP
BMC Genomics 2009, 10:432 (15 September 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

2.


Software    
Genoviz Software Development Kit: Java tool kit for building genomics visualization applications
Helt GA, Nicol JW, Erwin E, Blossom E, Blanchard SG, Chervitz SA, Harmon C, Loraine AE
BMC Bioinformatics 2009, 10:266 (25 August 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

3.


Editorial    
BMC Biology turns five
Moylan EC, Hodgkinson MJ, Kowalczuk M, Edmunds SC, Webb PA
BMC Biology 2008, 6:53 (16 December 2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

4.


Research article    
Characterization of paralogous protein families in rice
Lin H, Ouyang S, Egan A, Nobuta K, Haas BJ, Zhu W, Gu X, Silva JC, Meyers BC, Buell CR
BMC Plant Biology 2008, 8:18 (19 February 2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

5.


Method    
Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments
Haas BJ, Salzberg SL, Zhu W, Pertea M, Allen JE, Orvis J, White O, Buell CR, Wortman JR
Genome Biology 2008, 9:R7 (11 January 2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

6.


Software    
EuCAP, a Eukaryotic Community Annotation Package, and its application to the rice genome
Thibaud-Nissen F, Campbell M, Hamilton JP, Zhu W, Buell CR
BMC Genomics 2007, 8:388 (25 October 2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

7.


Research    
Comparative genomic analysis of fungal genomes reveals intron-rich ancestors
Stajich JE, Dietrich FS, Roy SW
Genome Biology 2007, 8:R223 (19 October 2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

8.


Research article    
Structure and evolution of a proviral locus of Glyptapanteles indiensis bracovirus
Desjardins CA, Gundersen-Rindal DE, Hostetler JB, Tallon LJ, Fuester RW, Schatz MC, Pedroni MJ, Fadrosh DW, Haas BJ, Toms BS, Chen D, Nene V
BMC Microbiology 2007, 7:61 (26 June 2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

9.


Research article    
Locational distribution of gene functional classes in Arabidopsis thaliana
Riley MC, Clare A, King RD
BMC Bioinformatics 2007, 8:112 (30 March 2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

10.


Database    
PlnTFDB: an integrative plant transcription factor database
Riaño-Pachón DM, Ruzicic S, Dreyer I, Mueller-Roeber B
BMC Bioinformatics 2007, 8:42 (7 February 2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

11.


Research article    
Experimental validation of novel genes predicted in the un-annotated regions of the Arabidopsis genome
Moskal WA, Wu HC, Underwood BA, Wang W, Town CD, Xiao Y
BMC Genomics 2007, 8:18 (17 January 2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central] [1 comment]

12.


Research article    
Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis
Campbell MA, Haas BJ, Hamilton JP, Mount SM, Buell CR
BMC Genomics 2006, 7:327 (28 December 2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

13.


Research article    
High precision multi-genome scale reannotation of enzyme function by EFICAz
Arakaki AK, Tian W, Skolnick J
BMC Genomics 2006, 7:315 (13 December 2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

14.


Software    
xGDB: open-source computational infrastructure for the integrated evaluation and analysis of genome features
Schlueter SD, Wilkerson MD, Dong Q, Brendel V
Genome Biology 2006, 7:R111 (20 November 2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

15.


Software    
yrGATE: a web-based gene-structure annotation tool for the identification and dissemination of eukaryotic genes
Wilkerson MD, Schlueter SD, Brendel V
Genome Biology 2006, 7:R58 (19 July 2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]


This article is also cited by a further 24 articles in PubMed Central


You can also check ISI Web of Science for additional citations (subscription required)
printer friendly 
to  [Help]

© 1999-2009 BioMed Central Ltd unless otherwise stated. Part of Springer Science+Business Media.