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Strengths and weaknesses of EST-based prediction of tissue-specific alternative splicing.
Gupta S, Zink D, Korn B, Vingron M, Haas SA
BMC Genomics
2004 Sep 28,
5
:72
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BioMed Central articles that cite the above article:
1.
Methodology article
Differential splicing using whole-transcript microarrays
Robinson MD, Speed TP
BMC Bioinformatics
2009,
10
:156
(22 May 2009)
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Research article
Global analysis of aberrant pre-mRNA splicing in glioblastoma using exon expression arrays
Cheung HC, Baggerly KA, Tsavachidis S, Bachinski LL, Neubauer VL, Nixon TJ, Aldape KD, Cote GJ, Krahe R
BMC Genomics
2008,
9
:216
(12 May 2008)
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Annotation of expressed sequence tags for the East African cichlid fish
Astatotilapia burtoni
and evolutionary analyses of cichlid ORFs
Salzburger W, Renn SCP, Steinke D, Braasch I, Hofmann HA, Meyer A
BMC Genomics
2008,
9
:96
(25 February 2008)
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4.
Database
A new advance in alternative splicing databases: from catalogue to detailed analysis of regulation of expression and function of human alternative splicing variants
de la Grange P, Dutertre M, Correa M, Auboeuf D
BMC Bioinformatics
2007,
8
:180
(4 June 2007)
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5.
Research
Discovery of tissue-specific exons using comprehensive human exon microarrays
Clark TA, Schweitzer AC, Chen TX, Staples MK, Lu G, Wang H, Williams A, Blume JE
Genome Biology
2007,
8
:R64
(24 April 2007)
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Verification of predicted alternatively spliced Wnt genes reveals two new splice variants (CTNNB1 and LRP5) and altered Axin-1 expression during tumour progression
Pospisil H, Herrmann A, Butherus K, Pirson S, Reich JG, Kemmner W
BMC Genomics
2006,
7
:148
(13 June 2006)
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7.
Research article
Signs of positive selection of somatic mutations in human cancers detected by EST sequence analysis
Babenko VN, Basu MK, Kondrashov FA, Rogozin IB, Koonin EV
BMC Cancer
2006,
6
:36
(9 February 2006)
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8.
Software
Djinn Lite: a tool for customised gene transcript modelling, annotation-data enrichment and exploration
Teber ET, Crawford E, Bolton KB, Van Dyk D, Schofield PR, Kapoor V, Church WB
BMC Bioinformatics
2006,
7
:33
(23 January 2006)
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This article is also cited by a further
7 articles
in PubMed Central
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