Skip to main content
Log on / register
Feedback
|
Support
|
My details
home
|
journals A-Z
|
subject areas
|
advanced search
|
authors
|
reviewers
|
libraries
|
jobs
|
about
|
my BioMed Central
Computational identification of developmental enhancers: conservation and function of transcription factor binding-site clusters in Drosophila melanogaster and Drosophila pseudoobscura.
Berman BP, Pfeiffer BD, Laverty TR, Salzberg SL, Rubin GM, Eisen MB, Celniker SE
Genome Biol
2004,
5
:R61
[
Full text
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
printer friendly
20 per page
50 per page
200 per page
500 per page
selected items
abstract
no abstract
any time period
7 Days
14 Days
30 Days
60 Days
90 Days
180 Days
1 Year
by date
by relevance
all 16 results
this page
selected items
to
Endnote (no abstracts)
Endnote + abstracts
Ref. Manager (no abstracts)
Ref. Manager + abstracts
RefWorks (no abstracts)
RefWorks + abstracts
BibTeX (no abstracts)
BibTeX + abstracts
ProCite (no abstracts)
ProCite + abstracts
[
Help
]
BioMed Central articles that cite the above article:
1.
Research article
Sequence conservation and combinatorial complexity of
Drosophila
neural precursor cell enhancers
Brody T, Rasband W, Baler K, Kuzin A, Kundu M, Odenwald WF
BMC Genomics
2008,
9
:371
(1 August 2008)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
2.
Research article
Studying the functional conservation of cis-regulatory modules and their transcriptional output
Bauer DC, Bailey TL
BMC Bioinformatics
2008,
9
:220
(29 April 2008)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
3.
Method
ModuleMiner - improved computational detection of
cis
-regulatory modules: are there different modes of gene regulation in embryonic development and adult tissues?
Van Loo P, Aerts S, Thienpont B, De Moor B, Moreau Y, Marynen P
Genome Biology
2008,
9
:R66
(7 April 2008)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
4.
Minireview
A systems view of
Drosophila
segmentation
Levine M
Genome Biology
2008,
9
:207
(11 February 2008)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
5.
Research article
Predicting combinatorial binding of transcription factors to regulatory elements in the human genome by association rule mining
Morgan XC, Ni S, Miranker DP, Iyer VR
BMC Bioinformatics
2007,
8
:445
(15 November 2007)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
6.
Research article
Identification of tissue-specific cis-regulatory modules based on interactions between transcription factors
Yu X, Lin J, Zack DJ, Qian J
BMC Bioinformatics
2007,
8
:437
(9 November 2007)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
7.
Research
Exact p-value calculation for heterotypic clusters of regulatory motifs and its application in computational annotation of
cis
-regulatory modules
Boeva V, Clément J, Régnier M, Roytberg MA, Makeev VJ
Algorithms for Molecular Biology
2007,
2
:13
(10 October 2007)
[
Abstract
]
[
Full Text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
8.
Research
Identification of novel regulatory factor X (RFX) target genes by comparative genomics in
Drosophila
species
Laurençon A, Dubruille R, Efimenko E, Grenier G, Bissett R, Cortier E, Rolland V, Swoboda P, Durand B
Genome Biology
2007,
8
:R195
(17 September 2007)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
9.
Methodology article
A novel ensemble learning method for
de novo
computational identification of DNA binding sites
Chakravarty A, Carlson JM, Khetani RS, Gross RH
BMC Bioinformatics
2007,
8
:249
(12 July 2007)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
10.
Research
Large-scale analysis of transcriptional
cis
-regulatory modules reveals both common features and distinct subclasses
Li L, Zhu Q, He X, Sinha S, Halfon MS
Genome Biology
2007,
8
:R101
(5 June 2007)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
F1000 Biology
]
[
Cited on BioMed Central
]
11.
Method
cis
-Decoder discovers constellations of conserved DNA sequences shared among tissue-specific enhancers
Brody T, Rasband W, Baler K, Kuzin A, Kundu M, Odenwald WF
Genome Biology
2007,
8
:R75
(9 May 2007)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
12.
Methodology article
Statistical significance of cis-regulatory modules
Schones DE, Smith AD, Zhang MQ
BMC Bioinformatics
2007,
8
:19
(22 January 2007)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
13.
Research
Three-dimensional morphology and gene expression in the
Drosophila
blastoderm at cellular resolution I: data acquisition pipeline
Luengo Hendriks CL, Keränen SVE, Fowlkes CC, Simirenko L, Weber GH, DePace AH, Henriquez C, Kaszuba DW, Hamann B, Eisen MB, Malik J, Sudar D, Biggin MD, Knowles DW
Genome Biology
2006,
7
:R123
(21 December 2006)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
14.
Research article
Detecting the limits of regulatory element conservation and divergence estimation using pairwise and multiple alignments
Pollard DA, Moses AM, Iyer VN, Eisen MB
BMC Bioinformatics
2006,
7
:376
(14 August 2006)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
15.
Research
Fine scale structural variants distinguish the genomes of
Drosophila melanogaster
and
D. pseudoobscura
Macdonald SJ, Long AD
Genome Biology
2006,
7
:R67
(27 July 2006)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
16.
Research
Promoter features related to tissue specificity as measured by Shannon entropy
Schug J, Schuller WP, Kappen C, Salbaum JM, Bucan M, Stoeckert CJ
Genome Biology
2005,
6
:R33
(29 March 2005)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
This article is also cited by a further
32 articles
in PubMed Central
You can also
check ISI Web of Science
for additional citations (subscription required)
printer friendly
20 per page
50 per page
200 per page
500 per page
selected items
abstract
no abstract
any time period
7 Days
14 Days
30 Days
60 Days
90 Days
180 Days
1 Year
by date
by relevance
all 16 results
this page
selected items
to
Endnote (no abstracts)
Endnote + abstracts
Ref. Manager (no abstracts)
Ref. Manager + abstracts
RefWorks (no abstracts)
RefWorks + abstracts
BibTeX (no abstracts)
BibTeX + abstracts
ProCite (no abstracts)
ProCite + abstracts
[
Help
]
Terms and Conditions
Privacy statement
Information for advertisers
Jobs at BMC
Contact us
© 1999-2008 BioMed Central Ltd unless otherwise stated. Part of
Springer Science+Business Media
.