Skip to main content
Log on / register
Feedback
|
Support
|
My details
home
|
journals A-Z
|
subject areas
|
advanced search
|
authors
|
reviewers
|
libraries
|
about
|
my BioMed Central
Prolinks: a database of protein functional linkages derived from coevolution.
Bowers PM, Pellegrini M, Thompson MJ, Fierro J, Yeates TO, Eisenberg D
Genome Biol
2004,
5
:R35
[
Full text
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
printer friendly
20 per page
50 per page
200 per page
500 per page
selected items
abstract
no abstract
any time period
7 Days
14 Days
30 Days
60 Days
90 Days
180 Days
1 Year
by date
by relevance
all 26 results
this page
selected items
to
Endnote (no abstracts)
Endnote + abstracts
Ref. Manager (no abstracts)
Ref. Manager + abstracts
RefWorks (no abstracts)
RefWorks + abstracts
BibTeX (no abstracts)
BibTeX + abstracts
ProCite (no abstracts)
ProCite + abstracts
[
Help
]
BioMed Central articles that cite the above article:
1.
Research article
The Symbiosis Interactome: a computational approach reveals novel components, functional interactions and modules in
Sinorhizobium meliloti
Rodriguez-Llorente I, Caviedes MA, Dary M, Palomares AJ, Cánovas FM, Peregrín-Alvarez JM
BMC Systems Biology
2009,
3
:63
(16 June 2009)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
2.
Research
Co-evolutionary networks of genes and cellular processes across fungal species
Tuller T, Kupiec M, Ruppin E
Genome Biology
2009,
10
:R48
(5 May 2009)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
3.
Research article
Uncovering new signaling proteins and potential drug targets through the interactome analysis of
Mycobacterium tuberculosis
Cui T, Zhang L, Wang X, He ZG
BMC Genomics
2009,
10
:118
(19 March 2009)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
4.
Research article
Predicting protein linkages in bacteria: Which method is best depends on task
Karimpour-Fard A, Leach SM, Gill RT, Hunter LE
BMC Bioinformatics
2008,
9
:397
(24 September 2008)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
5.
Research article
The topology of the bacterial co-conserved protein network and its implications for predicting protein function
Karimpour-Fard A, Leach SM, Hunter LE, Gill RT
BMC Genomics
2008,
9
:313
(30 June 2008)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
6.
Research article
Improving protein function prediction methods with integrated literature data
Gabow AP, Leach SM, Baumgartner WA, Hunter LE, Goldberg DS
BMC Bioinformatics
2008,
9
:198
(15 April 2008)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
7.
Software
PSAT: A web tool to compare genomic neighborhoods of multiple prokaryotic genomes
Fong C, Rohmer L, Radey M, Wasnick M, Brittnacher MJ
BMC Bioinformatics
2008,
9
:170
(26 March 2008)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
8.
Research article
High-precision high-coverage functional inference from integrated data sources
Linghu B, Snitkin ES, Holloway DT, Gustafson AM, Xia Y, DeLisi C
BMC Bioinformatics
2008,
9
:119
(25 February 2008)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
9.
Research article
Evidence of probabilistic behaviour in protein interaction networks
Ivanic J, Wallqvist A, Reifman J
BMC Systems Biology
2008,
2
:11
(31 January 2008)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
10.
Method
Broad network-based predictability of
Saccharomyces cerevisiae
gene loss-of-function phenotypes
McGary KL, Lee I, Marcotte EM
Genome Biology
2007,
8
:R258
(5 December 2007)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
11.
Research article
Investigation of factors affecting prediction of protein-protein interaction networks by phylogenetic profiling
Karimpour-Fard A, Hunter L, Gill RT
BMC Genomics
2007,
8
:393
(29 October 2007)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
12.
Methodology article
InPrePPI: an integrated evaluation method based on genomic context for predicting protein-protein interactions in prokaryotic genomes
Sun J, Sun Y, Ding G, Liu Q, Wang C, He Y, Shi T, Li Y, Zhao Z
BMC Bioinformatics
2007,
8
:414
(26 October 2007)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
13.
Research article
On the detection of functionally coherent groups of protein domains with an extension to protein annotation
McLaughlin WA, Chen K, Hou T, Wang W
BMC Bioinformatics
2007,
8
:390
(16 October 2007)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
14.
Method
Cross-species cluster co-conservation: a new method for generating protein interaction networks
Karimpour-Fard A, Detweiler CS, Erickson KD, Hunter L, Gill RT
Genome Biology
2007,
8
:R185
(5 September 2007)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
15.
Research
A proteome-wide protein interaction map for
Campylobacter jejuni
Parrish JR, Yu J, Liu G, Hines JA, Chan JE, Mangiola BA, Zhang H, Pacifico S, Fotouhi F, DiRita VJ, Ideker T, Andrews P, Finley RL
Genome Biology
2007,
8
:R130
(5 July 2007)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
16.
Research article
Discovering functional linkages and uncharacterized cellular pathways using phylogenetic profile comparisons: a comprehensive assessment
Jothi R, Przytycka TM, Aravind L
BMC Bioinformatics
2007,
8
:173
(23 May 2007)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
17.
Proceedings
An improved method for identifying functionally linked proteins using phylogenetic profiles
Cokus S, Mizutani S, Pellegrini M
BMC Bioinformatics
2007,
8
(Suppl 4):S7
(22 May 2007)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
18.
Methodology article
Integrated biclustering of heterogeneous genome-wide datasets for the inference of global regulatory networks
Reiss DJ, Baliga NS, Bonneau R
BMC Bioinformatics
2006,
7
:280
(2 June 2006)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
19.
Method
The Inferelator: an algorithm for learning parsimonious regulatory networks from systems-biology data sets
de novo
Bonneau R, Reiss DJ, Shannon P, Facciotti M, Hood L, Baliga NS, Thorsson V
Genome Biology
2006,
7
:R36
(10 May 2006)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
20.
Methodology article
Identifying metabolic enzymes with multiple types of association evidence
Kharchenko P, Chen L, Freund Y, Vitkup D, Church GM
BMC Bioinformatics
2006,
7
:177
(29 March 2006)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
21.
Software
The Gaggle: An open-source software system for integrating bioinformatics software and data sources
Shannon PT, Reiss DJ, Bonneau R, Baliga NS
BMC Bioinformatics
2006,
7
:176
(28 March 2006)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
22.
Methodology article
Gene annotation and network inference by phylogenetic profiling
Wu J, Hu Z, DeLisi C
BMC Bioinformatics
2006,
7
:80
(17 February 2006)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
23.
Method
Predicting genes for orphan metabolic activities using phylogenetic profiles
Chen L, Vitkup D
Genome Biology
2006,
7
:R17
(15 February 2006)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
24.
Research article
HomoMINT: an inferred human network based on orthology mapping of protein interactions discovered in model organisms
Persico M, Ceol A, Gavrila C, Hoffmann R, Florio A, Cesareni G
BMC Bioinformatics
2005,
6
(Suppl 4):S21
(1 December 2005)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
25.
Software
Phydbac "Gene Function Predictor" : a gene annotation tool based on genomic context analysis
Enault F, Suhre K, Claverie JM
BMC Bioinformatics
2005,
6
:247
(12 October 2005)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
26.
Research article
Phylogenetic detection of conserved gene clusters in microbial genomes
Zheng Y, Anton BP, Roberts RJ, Kasif S
BMC Bioinformatics
2005,
6
:243
(3 October 2005)
[
Abstract
]
[
Full text
]
[
PDF
]
[
PubMed
]
[
Related articles
]
[
Cited on BioMed Central
]
This article is also cited by a further
27 articles
in PubMed Central
You can also
check ISI Web of Science
for additional citations (subscription required)
printer friendly
20 per page
50 per page
200 per page
500 per page
selected items
abstract
no abstract
any time period
7 Days
14 Days
30 Days
60 Days
90 Days
180 Days
1 Year
by date
by relevance
all 26 results
this page
selected items
to
Endnote (no abstracts)
Endnote + abstracts
Ref. Manager (no abstracts)
Ref. Manager + abstracts
RefWorks (no abstracts)
RefWorks + abstracts
BibTeX (no abstracts)
BibTeX + abstracts
ProCite (no abstracts)
ProCite + abstracts
[
Help
]
Terms and Conditions
Privacy statement
Information for advertisers
Jobs at BMC
Contact us
© 1999-2009 BioMed Central Ltd unless otherwise stated. Part of
Springer Science+Business Media
.