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DAVID: Database for Annotation, Visualization, and Integrated Discovery.
Dennis G, Sherman BT, Hosack DA, Yang J, Gao W, Lane HC, Lempicki RA
Genome Biol 2003, 4:P3
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Short Report    
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61.


Method    
Boolean implication networks derived from large scale, whole genome microarray datasets
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63.


Research article    
Prioritizing genes of potential relevance to diseases affected by sex hormones: an example of Myasthenia Gravis
Kaur M, Schmeier S, MacPherson CR, Hofmann O, Hide WA, Taylor S, Willcox N, Bajic VB
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64.


Research article    
Mutant huntingtin activates Nrf2-responsive genes and impairs dopamine synthesis in a PC12 model of Huntington's disease
van Roon-Mom WMC, Pepers BA, 't Hoen PAC, Verwijmeren CACM, den Dunnen JT, Dorsman JC, van Ommen GJB
BMC Molecular Biology 2008, 9:84 (9 October 2008)
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65.


Research    
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Ray M, Ruan J, Zhang W
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66.


Research article    
Maternal Oct-4 is a potential key regulator of the developmental competence of mouse oocytes
Zuccotti M, Merico V, Sacchi L, Bellone M, Brink TC, Bellazzi R, Stefanelli M, Redi CA, Garagna S, Adjaye J
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67.


Research article    
Regulatory subunits of PKA define an axis of cellular proliferation/differentiation in ovarian cancer cells
Cheadle C, Nesterova M, Watkins T, Barnes KC, Hall JC, Rosen A, Becker KG, Cho-Chung YS
BMC Medical Genomics 2008, 1:43 (26 September 2008)
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68.


Software    
Presenting and exploring biological pathways with PathVisio
van Iersel MP, Kelder T, Pico AR, Hanspers K, Coort S, Conklin BR, Evelo C
BMC Bioinformatics 2008, 9:399 (25 September 2008)
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69.


Research article    
Different gene-expression profiles for the poorly differentiated carcinoma and the highly differentiated papillary adenocarcinoma in mammary glands support distinct metabolic pathways
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70.


Method    
Systematic bioinformatic analysis of expression levels of 17,330 human genes across 9,783 samples from 175 types of healthy and pathological tissues
Kilpinen S, Autio R, Ojala K, Iljin K, Bucher E, Sara H, Pisto T, Saarela M, Skotheim RI, Björkman M, Mpindi JP, Haapa-Paananen S, Vainio P, Edgren H, Wolf M, Astola J, Nees M, Hautaniemi S, Kallioniemi O
Genome Biology 2008, 9:R139 (19 September 2008)
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71.


Database    
SQUAT: A web tool to mine human, murine and avian SAGE data
Leyritz J, Schicklin S, Blachon S, Keime C, Robardet C, Boulicaut JF, Besson J, Pensa RG, Gandrillon O
BMC Bioinformatics 2008, 9:378 (18 September 2008)
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72.


Methodology article    
Combining Shapley value and statistics to the analysis of gene expression data in children exposed to air pollution
Moretti S, van Leeuwen D, Gmuender H, Bonassi S, van Delft J, Kleinjans J, Patrone F, Merlo DF
BMC Bioinformatics 2008, 9:361 (2 September 2008)
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73.


Proceedings    
From microarray to biology: an integrated experimental, statistical and in silico analysis of how the extracellular matrix modulates the phenotype of cancer cells
Dozmorov MG, Kyker KD, Hauser PJ, Saban R, Buethe DD, Dozmorov I, Centola MB, Culkin DJ, Hurst RE
BMC Bioinformatics 2008, 9(Suppl 9):S4 (12 August 2008)
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74.


Research article    
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Research    
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Research article    
Evolutionary conservation of zinc finger transcription factor binding sites in promoters of genes co-expressed with WT1 in prostate cancer
Eisermann K, Tandon S, Bazarov A, Brett A, Fraizer G, Piontkivska H
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Research article    
Meta-analysis of nasopharyngeal carcinoma microarray data explores mechanism of EBV-regulated neoplastic transformation
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Research article    
Association between PPARGC1A polymorphisms and the occurrence of nonalcoholic fatty liver disease (NAFLD)
Yoneda M, Hotta K, Nozaki Y, Endo H, Uchiyama T, Mawatari H, Iida H, Kato S, Hosono K, Fujita K, Yoneda K, Takahashi H, Kirikoshi H, Kobayashi N, Inamori M, Abe Y, Kubota K, Saito S, Maeyama S, Wada K, Nakajima A
BMC Gastroenterology 2008, 8:27 (27 June 2008)
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80.


Methodology article    
Literature-aided meta-analysis of microarray data: a compendium study on muscle development and disease
Jelier R, 't Hoen PAC, Sterrenburg E, den Dunnen JT, van Ommen GJB, Kors JA, Mons B
BMC Bioinformatics 2008, 9:291 (24 June 2008)
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81.


Methodology article    
Stability of gene contributions and identification of outliers in multivariate analysis of microarray data
Baty F, Jaeger D, Preiswerk F, Schumacher MM, Brutsche MH
BMC Bioinformatics 2008, 9:289 (20 June 2008)
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82.


Research article    
Sources of variation in baseline gene expression levels from toxicogenomics study control animals across multiple laboratories
Boedigheimer MJ, Wolfinger RD, Bass MB, Bushel PR, Chou JW, Cooper M, Corton JC, Fostel J, Hester S, Lee JS, Liu F, Liu J, Qian HR, Quackenbush J, Pettit S, Thompson KL
BMC Genomics 2008, 9:285 (12 June 2008)
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83.


Research    
Identification of differentially expressed proteins in spontaneous thymic lymphomas from knockout mice with deletion of p53
Honoré B, Buus S, Claësson MH
Proteome Science 2008, 6:18 (10 June 2008)
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84.


Research article    
Functional characterization of endogenous siRNA target genes in Caenorhabditis elegans
Asikainen S, Heikkinen L, Wong G, Storvik M
BMC Genomics 2008, 9:270 (3 June 2008)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
85.


Research article    
'Systems toxicology' approach identifies coordinated metabolic responses to copper in a terrestrial non-model invertebrate, the earthworm Lumbricus rubellus
Bundy JG, Sidhu JK, Rana F, Spurgeon DJ, Svendsen C, Wren JF, Stürzenbaum SR, Morgan AJ, Kille P
BMC Biology 2008, 6:25 (3 June 2008)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
86.


Research    
On the necessity of different statistical treatment for Illumina BeadChip and Affymetrix GeneChip data and its significance for biological interpretation
Wong WC, Loh M, Eisenhaber F
Biology Direct 2008, 3:23 (3 June 2008)
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87.


Research article    
Divergence of canonical danger signals: The genome-level expression patterns of human mononuclear cells subjected to heat shock or lipopolysaccharide
Wong HR, Odoms K, Sakthivel B
BMC Immunology 2008, 9:24 (30 May 2008)
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88.


Research    
Improving the power for detecting overlapping genes from multiple DNA microarray-derived gene lists
Deng X, Xu J, Wang C
BMC Bioinformatics 2008, 9(Suppl 6):S14 (28 May 2008)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
89.


Research article    
Genomic analysis of post-mating changes in the honey bee queen (Apis mellifera)
Kocher SD, Richard FJ, Tarpy DR, Grozinger CM
BMC Genomics 2008, 9:232 (19 May 2008)
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90.


Research article    
In vivo gene expression profiling of human intestinal epithelial cells: analysis by laser microdissection of formalin fixed tissues
George MD, Wehkamp J, Kays RJ, Leutenegger CM, Sabir S, Grishina I, Dandekar S, Bevins CL
BMC Genomics 2008, 9:209 (5 May 2008)
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91.


Research article    
Transcriptome analysis identifies pathways associated with enhanced maternal performance in QSi5 mice
Ramanathan P, Martin IC, Gardiner-Garden M, Thomson PC, Taylor RM, Ormandy CJ, Moran C, Williamson P
BMC Genomics 2008, 9:197 (29 April 2008)
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92.


Research    
Histone deacetylase inhibition accelerates the early events of stem cell differentiation: transcriptomic and epigenetic analysis
Karantzali E, Schulz H, Hummel O, Hubner N, Hatzopoulos AK, Kretsovali A
Genome Biology 2008, 9:R65 (4 April 2008)
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93.


Research    
A sequence-based survey of the complex structural organization of tumor genomes
Raphael BJ, Volik S, Yu P, Wu C, Huang G, Linardopoulou EV, Trask BJ, Waldman F, Costello J, Pienta KJ, Mills GB, Bajsarowicz K, Kobayashi Y, Sridharan S, Paris PL, Tao Q, Aerni SJ, Brown RP, Bashir A, Gray JW, Cheng JF, de Jong P, Nefedov M, Ried T, Padilla-Nash HM, Collins CC
Genome Biology 2008, 9:R59 (25 March 2008)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
94.


Database    
MADIBA: A web server toolkit for biological interpretation of Plasmodium and plant gene clusters
Law PJ, Claudel-Renard C, Joubert F, Louw AI, Berger DK
BMC Genomics 2008, 9:105 (28 February 2008)
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95.


Research article    
Merging microarray data from separate breast cancer studies provides a robust prognostic test
Xu L, Tan AC, Winslow RL, Geman D
BMC Bioinformatics 2008, 9:125 (27 February 2008)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
96.


Methodology article    
Simple integrative preprocessing preserves what is shared in data sources
Tripathi A, Klami A, Kaski S
BMC Bioinformatics 2008, 9:111 (21 February 2008)
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97.


Research article    
Effect of thyroid hormone concentration on the transcriptional response underlying induced metamorphosis in the Mexican axolotl (Ambystoma)
Page RB, Voss SR, Samuels AK, Smith JJ, Putta S, Beachy CK
BMC Genomics 2008, 9:78 (11 February 2008)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
98.


Research article    
Analysis of the retinal gene expression profile after hypoxic preconditioning identifies candidate genes for neuroprotection
Thiersch M, Raffelsberger W, Frigg R, Samardzija M, Wenzel A, Poch O, Grimm C
BMC Genomics 2008, 9:73 (8 February 2008)
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99.


Research article    
Characterization of a newly developed chicken 44K Agilent microarray
Li X, Chiang HI, Zhu J, Dowd SE, Zhou H
BMC Genomics 2008, 9:60 (31 January 2008)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
100.


Research article    
Meta-analysis of breast cancer microarray studies in conjunction with conserved cis-elements suggest patterns for coordinate regulation
Smith DD, Sætrom P, Snøve O, Lundberg C, Rivas GE, Glackin C, Larson GP
BMC Bioinformatics 2008, 9:63 (28 January 2008)
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101.


Research    
Novel insights into the relationships between dendritic cell subsets in human and mouse revealed by genome-wide expression profiling
Robbins SH, Walzer T, Dembélé D, Thibault C, Defays A, Bessou G, Xu H, Vivier E, Sellars ML, Pierre P, Sharp FR, Chan S, Kastner P, Dalod M
Genome Biology 2008, 9:R17 (24 January 2008)
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102.


Research article    
Coordinated evolution of co-expressed gene clusters in the Drosophila transcriptome
Mezey JG, Nuzhdin SV, Ye F, Jones CD
BMC Evolutionary Biology 2008, 8:2 (7 January 2008)
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103.


Method    
Prediction of synergistic transcription factors by function conservation
Hu Z, Hu B, Collins JF
Genome Biology 2007, 8:R257 (5 December 2007)
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104.


Method    
Broad network-based predictability of Saccharomyces cerevisiae gene loss-of-function phenotypes
McGary KL, Lee I, Marcotte EM
Genome Biology 2007, 8:R258 (5 December 2007)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
105.


Research    
Genome-wide expression profiling and bioinformatics analysis of diurnally regulated genes in the mouse prefrontal cortex
Yang S, Wang K, Valladares O, Hannenhalli S, Bucan M
Genome Biology 2007, 8:R247 (20 November 2007)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles]
106.


Software    
The Firegoose: two-way integration of diverse data from different bioinformatics web resources with desktop applications
Bare JC, Shannon PT, Schmid AK, Baliga NS
BMC Bioinformatics 2007, 8:456 (19 November 2007)
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107.


Research article    
Suicide candidate genes associated with bipolar disorder and schizophrenia: An exploratory gene expression profiling analysis of post-mortem prefrontal cortex
Kim S, Choi KH, Baykiz AF, Gershenfeld HK
BMC Genomics 2007, 8:413 (12 November 2007)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
108.


Database    
DAVID Knowledgebase: a gene-centered database integrating heterogeneous gene annotation resources to facilitate high-throughput gene functional analysis
Sherman BT, Huang DW, Tan Q, Guo Y, Bour S, Liu D, Stephens R, Baseler MW, Lane HC, Lempicki RA
BMC Bioinformatics 2007, 8:426 (2 November 2007)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
109.


Research article    
Large-scale analysis by SAGE reveals new mechanisms of v-erbA oncogene action
Bresson C, Keime C, Faure C, Letrillard Y, Barbado M, Sanfilippo S, Benhra N, Gandrillon O, Gonin-Giraud S
BMC Genomics 2007, 8:390 (26 October 2007)
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110.


Methodology article    
Computational selection and prioritization of candidate genes for Fetal Alcohol Syndrome
Lombard Z, Tiffin N, Hofmann O, Bajic VB, Hide W, Ramsay M
BMC Genomics 2007, 8:389 (25 October 2007)
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111.


Software    
BMDExpress: a software tool for the benchmark dose analyses of genomic data
Yang L, Allen BC, Thomas RS
BMC Genomics 2007, 8:387 (25 October 2007)
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112.


Method    
Simplified ontologies allowing comparison of developmental mammalian gene expression
Kruger A, Hofmann O, Carninci P, Hayashizaki Y, Hide W
Genome Biology 2007, 8:R229 (25 October 2007)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
113.


Research    
Gene expression profiling of Hfe-/- liver and duodenum in mouse strains with differing susceptibilities to iron loading: identification of transcriptional regulatory targets of Hfe and potential hemochromatosis modifiers
Coppin H, Darnaud V, Kautz L, Meynard D, Aubry M, Mosser J, Martinez M, Roth MP
Genome Biology 2007, 8:R221 (18 October 2007)
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114.


Research article    
Improved human disease candidate gene prioritization using mouse phenotype
Chen J, Xu H, Aronow BJ, Jegga AG
BMC Bioinformatics 2007, 8:392 (16 October 2007)
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115.


Research article    
Characterization of oligopeptide patterns in large protein sets
Bresell A, Persson B
BMC Genomics 2007, 8:346 (1 October 2007)
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116.


Methodology article    
Linking microarray reporters with protein functions
Gaj S, van Erk A, van Haaften RIM, Evelo CTA
BMC Bioinformatics 2007, 8:360 (26 September 2007)
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117.


Research article    
Integrated analysis of independent gene expression microarray datasets improves the predictability of breast cancer outcome
Zhang Z, Chen D, Fenstermacher DA
BMC Genomics 2007, 8:331 (20 September 2007)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
118.


Brief reports    
OCPAT: an online codon-preserved alignment tool for evolutionary genomic analysis of protein coding sequences
Liu G, Uddin M, Islam M, Goodman M, Grossman LI, Romero R, Wildman DE
Source Code for Biology and Medicine 2007, 2:5 (18 September 2007)
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119.


Research article    
Characterization of the effect of sample quality on high density oligonucleotide microarray data using progressively degraded rat liver RNA
Thompson KL, Pine PS, Rosenzweig BA, Turpaz Y, Retief J
BMC Biotechnology 2007, 7:57 (13 September 2007)
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120.


Methodology article    
EDISA: extracting biclusters from multiple time-series of gene expression profiles
Supper J, Strauch M, Wanke D, Harter K, Zell A
BMC Bioinformatics 2007, 8:334 (12 September 2007)
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121.


Primary research    
Modulation by decitabine of gene expression and growth of osteosarcoma U2OS cells in vitro and in xenografts: Identification of apoptotic genes as targets for demethylation
Al-Romaih K, Somers GR, Bayani J, Hughes S, Prasad M, Cutz JC, Xue H, Zielenska M, Wang Y, Squire JA
Cancer Cell International 2007, 7:14 (10 September 2007)
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122.


Software    
The DAVID Gene Functional Classification Tool: a novel biological module-centric algorithm to functionally analyze large gene lists
Huang DW, Sherman BT, Tan Q, Collins JR, Alvord WG, Roayaei J, Stephens R, Baseler MW, Lane HC, Lempicki RA
Genome Biology 2007, 8:R183 (4 September 2007)
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123.


Research    
The roles of binding site arrangement and combinatorial targeting in microRNA repression of gene expression
Hon LS, Zhang Z
Genome Biology 2007, 8:R166 (14 August 2007)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
124.


Methodology article    
Post hoc pattern matching: assigning significance to statistically defined expression patterns in single channel microarray data
Hulshizer R, Blalock EM
BMC Bioinformatics 2007, 8:240 (5 July 2007)
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125.


Research    
Morphine effects on striatal transcriptome in mice
Korostynski M, Piechota M, Kaminska D, Solecki W, Przewlocki R
Genome Biology 2007, 8:R128 (28 June 2007)
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126.


Primary research    
Common molecular pathways involved in human CD133+/CD34+ progenitor cell expansion and cancer
Okamoto OK, Carvalho ACSR, Marti LC, Vêncio RZ, Moreira-Filho CA
Cancer Cell International 2007, 7:11 (8 June 2007)
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127.


Research    
A functional map of NFB signaling identifies novel modulators and multiple system controls
Halsey TA, Yang L, Walker JR, Hogenesch JB, Thomas RS
Genome Biology 2007, 8:R104 (6 June 2007)
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128.


Research article    
Understanding network concepts in modules
Dong J, Horvath S
BMC Systems Biology 2007, 1:24 (4 June 2007)
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129.


Software    
Genome Expression Pathway Analysis Tool Analysis and visualization of microarray gene expression data under genomic, proteomic and metabolic context
Weniger M, Engelmann JC, Schultz J
BMC Bioinformatics 2007, 8:179 (2 June 2007)
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130.


Research article    
Silencing of core transcription factors in human EC cells highlights the importance of autocrine FGF signaling for self-renewal
Greber B, Lehrach H, Adjaye J
BMC Developmental Biology 2007, 7:46 (16 May 2007)
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131.


Method    
Revealing signaling pathway deregulation by using gene expression signatures and regulatory motif analysis
Liu Y, Ringnér M
Genome Biology 2007, 8:R77 (11 May 2007)
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132.


Research    
Genomic analysis of human lung fibroblasts exposed to vanadium pentoxide to identify candidate genes for occupational bronchitis
Ingram JL, Antao-Menezes A, Turpin EA, Wallace DG, Mangum JB, Pluta LJ, Thomas RS, Bonner JC
Respiratory Research 2007, 8:34 (25 April 2007)
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133.


Research article    
Expression profiling of genes regulated by TGF-beta: Differential regulation in normal and tumour cells
Ranganathan P, Agrawal A, Bhushan R, Chavalmane AK, Kalathur RKR, Takahashi T, Kondaiah P
BMC Genomics 2007, 8:98 (11 April 2007)
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134.


Research    
Global transcriptome analysis of murine embryonic stem cell-derived cardiomyocytes
Doss MX, Winkler J, Chen S, Hippler-Altenburg R, Sotiriadou I, Halbach M, Pfannkuche K, Liang H, Schulz H, Hummel O, Hübner N, Rottscheidt R, Hescheler J, Sachinidis A
Genome Biology 2007, 8:R56 (11 April 2007)
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135.


Research article    
Including probe-level uncertainty in model-based gene expression clustering
Liu X, Lin KK, Andersen B, Rattray M
BMC Bioinformatics 2007, 8:98 (21 March 2007)
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136.


Research article    
Transcriptional profiling of C57 and DBA strains of mice in the absence and presence of morphine
Grice DE, Reenilä I, Männistö PT, Brooks AI, Smith GG, Golden GT, Buxbaum JD, Berrettini WH
BMC Genomics 2007, 8:76 (16 March 2007)
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137.


Research    
microRNA expression in the prefrontal cortex of individuals with schizophrenia and schizoaffective disorder
Perkins DO, Jeffries CD, Jarskog LF, Thomson JM, Woods K, Newman MA, Parker JS, Jin J, Hammond SM
Genome Biology 2007, 8:R27 (27 February 2007)
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138.


Software    
DiscoverySpace: an interactive data analysis application
Robertson N, Oveisi-Fordorei M, Zuyderduyn SD, Varhol RJ, Fjell C, Marra M, Jones S, Siddiqui A
Genome Biology 2007, 8:R6 (8 January 2007)
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139.


Software    
GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists
Carmona-Saez P, Chagoyen M, Tirado F, Carazo JM, Pascual-Montano A
Genome Biology 2007, 8:R3 (4 January 2007)
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140.


Research    
Genome-wide identification of functionally distinct subsets of cellular mRNAs associated with two nucleocytoplasmic-shuttling mammalian splicing factors
Gama-Carvalho M, Barbosa-Morais NL, Brodsky AS, Silver PA, Carmo-Fonseca M
Genome Biology 2006, 7:R113 (30 November 2006)
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141.


Review    
Integration and mining of malaria molecular, functional and pharmacological data: how far are we from a chemogenomic knowledge space?
Birkholtz LM, Bastien O, Wells G, Grando D, Joubert F, Kasam V, Zimmermann M, Ortet P, Jacq N, Saïdani N, Roy S, Hofmann-Apitius M, Breton V, Louw AI, Maréchal E
Malaria Journal 2006, 5:110 (17 November 2006)
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142.


Research article    
Defining the gene expression signature of rhabdomyosarcoma by meta-analysis
Romualdi C, De Pittà C, Tombolan L, Bortoluzzi S, Sartori F, Rosolen A, Lanfranchi G
BMC Genomics 2006, 7:287 (7 November 2006)
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143.


Research article    
Mining expressed sequence tags identifies cancer markers of clinical interest
Campagne F, Skrabanek L
BMC Bioinformatics 2006, 7:481 (1 November 2006)
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144.


Methodology article    
Analysis with respect to instrumental variables for the exploration of microarray data structures
Baty F, Facompré M, Wiegand J, Schwager J, Brutsche MH
BMC Bioinformatics 2006, 7:422 (29 September 2006)
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145.


Software    
CROPPER: a metagene creator resource for cross-platform and cross-species compendium studies
Paananen J, Storvik M, Wong G
BMC Bioinformatics 2006, 7:418 (22 September 2006)
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146.


Research    
Shuffling of cis-regulatory elements is a pervasive feature of the vertebrate lineage
Sanges R, Kalmar E, Claudiani P, D'Amato M, Muller F, Stupka E
Genome Biology 2006, 7:R56 (19 July 2006)
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147.


Research    
Involvement of HTLV-I Tax and CREB in aneuploidy: a bioinformatics approach
de la Fuente C, Gupta MV, Klase Z, Strouss K, Cahan P, McCaffery T, Galante A, Soteropoulos P, Pumfery A, Fujii M, Kashanchi F
Retrovirology 2006, 3:43 (5 July 2006)
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148.


Research article    
An annotated cDNA library of juvenile Euprymna scolopes with and without colonization by the symbiont Vibrio fischeri
Chun CK, Scheetz TE, Bonaldo MF, Brown B, Clemens A, Crookes-Goodson WJ, Crouch K, DeMartini T, Eyestone M, Goodson MS, Janssens B, Kimbell JL, Koropatnick TA, Kucaba T, Smith C, Stewart JJ, Tong D, Troll JV, Webster S, Winhall-Rice J, Yap C, Casavant TL, McFall-Ngai MJ, Soares MB
BMC Genomics 2006, 7:154 (16 June 2006)
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149.


Research article    
Gene expression profiling in the striatum of inbred mouse strains with distinct opioid-related phenotypes
Korostynski M, Kaminska-Chowaniec D, Piechota M, Przewlocki R
BMC Genomics 2006, 7:146 (13 June 2006)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
150.


Research article    
Alu elements contain many binding sites for transcription factors and may play a role in regulation of developmental processes
Polak P, Domany E
BMC Genomics 2006, 7:133 (1 June 2006)
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151.


Research    
PI3K signaling and miRNA expression during the response of quiescent human fibroblasts to distinct proliferative stimuli
Gu J, Iyer VR
Genome Biology 2006, 7:R42 (31 May 2006)
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152.


Research article    
Gene expression alterations in brains of mice infected with three strains of scrapie
Skinner PJ, Abbassi H, Chesebro B, Race RE, Reilly C, Haase AT
BMC Genomics 2006, 7:114 (16 May 2006)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central] [1 comment]
153.


Database    
K-SPMM: a database of murine spermatogenic promoters modules & motifs
Lu Y, Platts AE, Ostermeier GC, Krawetz SA
BMC Bioinformatics 2006, 7:238 (3 May 2006)
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154.


Methodology article    
Comparison of gene coverage of mouse oligonucleotide microarray platforms
Verdugo RA, Medrano JF
BMC Genomics 2006, 7:58 (21 March 2006)
 [Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
155.


Research article    
Gene expression profiles in developing nephrons using Lim1 metanephric mesenchyme-specific conditional mutant mice
Chen YT, Kobayashi A, Kwan KM, Johnson RL, Behringer RR
BMC Nephrology 2006, 7:1 (7 February 2006)
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156.


Research article    
Preliminary evidence of mitochondrial dysfunction associated with post-infective fatigue after acute infection with Epstein Barr Virus
Vernon SD, Whistler T, Cameron B, Hickie IB, Reeves WC, Lloyd A
BMC Infectious Diseases 2006, 6:15 (31 January 2006)
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157.


Methodology article    
Utilization of two sample t-test statistics from redundant probe sets to evaluate different probe set algorithms in GeneChip studies
Hu Z, Willsky GR
BMC Bioinformatics 2006, 7:12 (10 January 2006)
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158.


Research article    
cGMP-independent nitric oxide signaling and regulation of the cell cycle
Cui X, Zhang J, Ma P, Myers DE, Goldberg IG, Sittler KJ, Barb JJ, Munson PJ, Cintron AP, McCoy JP, Wang S, Danner RL
BMC Genomics 2005, 6:151 (3 November 2005)
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159.


Software    
Storing, linking, and mining microarray databases using SRS
Veldhoven A, Lange D, Smid M, de Jager V, Kors JA, Jenster G
BMC Bioinformatics 2005, 6:192 (27 July 2005)
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160.


Research    
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