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Items 1 - 20 of 107
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3:

Characterization of 954 bovine full-CDS cDNA sequences.

Harhay GP, Sonstegard TS, Keele JW, Heaton MP, Clawson ML, Snelling WM, Wiedmann RT, Van Tassell CP, Smith TP.

BMC Genomics. 2005 Nov 23;6:166.

PMID: 16305752 [PubMed - indexed for MEDLINE]

4:

Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with pathogenic congeners.

Ruby EG, Urbanowski M, Campbell J, Dunn A, Faini M, Gunsalus R, Lostroh P, Lupp C, McCann J, Millikan D, Schaefer A, Stabb E, Stevens A, Visick K, Whistler C, Greenberg EP.

Proc Natl Acad Sci U S A. 2005 Feb 22;102(8):3004-9. Epub 2005 Feb 9.

PMID: 15703294 [PubMed - indexed for MEDLINE]

5:

Characterization of pES213, a small mobilizable plasmid from Vibrio fischeri.

Dunn AK, Martin MO, Stabb EV.

Plasmid. 2005 Sep;54(2):114-34. Epub 2005 Mar 2.

PMID: 16122560 [PubMed - indexed for MEDLINE]

6:

Interrupted coding sequences in Mycobacterium smegmatis: authentic mutations or sequencing errors?

Deshayes C, Perrodou E, Gallien S, Euphrasie D, Schaeffer C, Van-Dorsselaer A, Poch O, Lecompte O, Reyrat JM.

Genome Biol. 2007;8(2):R20.

PMID: 17295914 [PubMed - indexed for MEDLINE]

8:

ASAP: amplification, sequencing & annotation of plastomes.

Dhingra A, Folta KM.

BMC Genomics. 2005 Dec 7;6:176.

PMID: 16336644 [PubMed - indexed for MEDLINE]

9:

A versatile computational pipeline for bacterial genome annotation improvement and comparative analysis, with Brucella as a use case.

Yu GX, Snyder EE, Boyle SM, Crasta OR, Czar M, Mane SP, Purkayastha A, Sobral B, Setubal JC.

Nucleic Acids Res. 2007;35(12):3953-62. Epub 2007 Jun 6.

PMID: 17553834 [PubMed - indexed for MEDLINE]

10:

Gene discovery in the hamster: a comparative genomics approach for gene annotation by sequencing of hamster testis cDNAs.

Oduru S, Campbell JL, Karri S, Hendry WJ, Khan SA, Williams SC.

BMC Genomics. 2003 Jun 3;4(1):22.

PMID: 12783626 [PubMed - indexed for MEDLINE]

11:

Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding.

Ralph SG, Chun HJ, Cooper D, Kirkpatrick R, Kolosova N, Gunter L, Tuskan GA, Douglas CJ, Holt RA, Jones SJ, Marra MA, Bohlmann J.

BMC Genomics. 2008 Jan 29;9:57.

PMID: 18230180 [PubMed - indexed for MEDLINE]

12:

Environmental genomics of "Haloquadratum walsbyi" in a saltern crystallizer indicates a large pool of accessory genes in an otherwise coherent species.

Legault BA, Lopez-Lopez A, Alba-Casado JC, Doolittle WF, Bolhuis H, Rodriguez-Valera F, Papke RT.

BMC Genomics. 2006 Jul 4;7:171.

PMID: 16820057 [PubMed - indexed for MEDLINE]

13:

Gene sequences of the pil operon reveal relationships between symbiotic strains of Vibrio fischeri.

Browne-Silva J, Nishiguchi MK.

Int J Syst Evol Microbiol. 2008 Jun;58(Pt 6):1292-9.

PMID: 18523167 [PubMed - indexed for MEDLINE]

14:

Gene fusions and gene duplications: relevance to genomic annotation and functional analysis.

Serres MH, Riley M.

BMC Genomics. 2005 Mar 9;6(1):33.

PMID: 15757509 [PubMed - indexed for MEDLINE]

15:

Improvement of whole-genome annotation of cereals through comparative analyses.

Zhu W, Buell CR.

Genome Res. 2007 Mar;17(3):299-310. Epub 2007 Feb 6.

PMID: 17284677 [PubMed - indexed for MEDLINE]

16:

A general pipeline for the development of anchor markers for comparative genomics in plants.

Fredslund J, Madsen LH, Hougaard BK, Nielsen AM, Bertioli D, Sandal N, Stougaard J, Schauser L.

BMC Genomics. 2006 Aug 14;7:207.

PMID: 16907970 [PubMed - indexed for MEDLINE]

17:

The sequence of the human genome.

Venter JC, Adams MD, Myers EW, Li PW, Mural RJ, Sutton GG, Smith HO, Yandell M, Evans CA, Holt RA, Gocayne JD, Amanatides P, Ballew RM, Huson DH, Wortman JR, Zhang Q, Kodira CD, Zheng XH, Chen L, Skupski M, Subramanian G, Thomas PD, Zhang J, Gabor Miklos GL, Nelson C, Broder S, Clark AG, Nadeau J, McKusick VA, Zinder N, Levine AJ, Roberts RJ, Simon M, Slayman C, Hunkapiller M, Bolanos R, Delcher A, Dew I, Fasulo D, Flanigan M, Florea L, Halpern A, Hannenhalli S, Kravitz S, Levy S, Mobarry C, Reinert K, Remington K, Abu-Threideh J, Beasley E, Biddick K, Bonazzi V, Brandon R, Cargill M, Chandramouliswaran I, Charlab R, Chaturvedi K, Deng Z, Di Francesco V, Dunn P, Eilbeck K, Evangelista C, Gabrielian AE, Gan W, Ge W, Gong F, Gu Z, Guan P, Heiman TJ, Higgins ME, Ji RR, Ke Z, Ketchum KA, Lai Z, Lei Y, Li Z, Li J, Liang Y, Lin X, Lu F, Merkulov GV, Milshina N, Moore HM, Naik AK, Narayan VA, Neelam B, Nusskern D, Rusch DB, Salzberg S, Shao W, Shue B, Sun J, Wang Z, Wang A, Wang X, Wang J, Wei M, Wides R, Xiao C, Yan C, Yao A, Ye J, Zhan M, Zhang W, Zhang H, Zhao Q, Zheng L, Zhong F, Zhong W, Zhu S, Zhao S, Gilbert D, Baumhueter S, Spier G, Carter C, Cravchik A, Woodage T, Ali F, An H, Awe A, Baldwin D, Baden H, Barnstead M, Barrow I, Beeson K, Busam D, Carver A, Center A, Cheng ML, Curry L, Danaher S, Davenport L, Desilets R, Dietz S, Dodson K, Doup L, Ferriera S, Garg N, Gluecksmann A, Hart B, Haynes J, Haynes C, Heiner C, Hladun S, Hostin D, Houck J, Howland T, Ibegwam C, Johnson J, Kalush F, Kline L, Koduru S, Love A, Mann F, May D, McCawley S, McIntosh T, McMullen I, Moy M, Moy L, Murphy B, Nelson K, Pfannkoch C, Pratts E, Puri V, Qureshi H, Reardon M, Rodriguez R, Rogers YH, Romblad D, Ruhfel B, Scott R, Sitter C, Smallwood M, Stewart E, Strong R, Suh E, Thomas R, Tint NN, Tse S, Vech C, Wang G, Wetter J, Williams S, Williams M, Windsor S, Winn-Deen E, Wolfe K, Zaveri J, Zaveri K, Abril JF, Guigó R, Campbell MJ, Sjolander KV, Karlak B, Kejariwal A, Mi H, Lazareva B, Hatton T, Narechania A, Diemer K, Muruganujan A, Guo N, Sato S, Bafna V, Istrail S, Lippert R, Schwartz R, Walenz B, Yooseph S, Allen D, Basu A, Baxendale J, Blick L, Caminha M, Carnes-Stine J, Caulk P, Chiang YH, Coyne M, Dahlke C, Mays A, Dombroski M, Donnelly M, Ely D, Esparham S, Fosler C, Gire H, Glanowski S, Glasser K, Glodek A, Gorokhov M, Graham K, Gropman B, Harris M, Heil J, Henderson S, Hoover J, Jennings D, Jordan C, Jordan J, Kasha J, Kagan L, Kraft C, Levitsky A, Lewis M, Liu X, Lopez J, Ma D, Majoros W, McDaniel J, Murphy S, Newman M, Nguyen T, Nguyen N, Nodell M, Pan S, Peck J, Peterson M, Rowe W, Sanders R, Scott J, Simpson M, Smith T, Sprague A, Stockwell T, Turner R, Venter E, Wang M, Wen M, Wu D, Wu M, Xia A, Zandieh A, Zhu X.

Science. 2001 Feb 16;291(5507):1304-51. Erratum in: Science 2001 Jun 5;292(5523):1838.

PMID: 11181995 [PubMed - indexed for MEDLINE]

18:

Contribution of pilA to competitive colonization of the squid Euprymna scolopes by Vibrio fischeri.

Stabb EV, Ruby EG.

Appl Environ Microbiol. 2003 Feb;69(2):820-6.

PMID: 12571000 [PubMed - indexed for MEDLINE]

19:

Improving the specificity of high-throughput ortholog prediction.

Fulton DL, Li YY, Laird MR, Horsman BG, Roche FM, Brinkman FS.

BMC Bioinformatics. 2006 May 28;7:270.

PMID: 16729895 [PubMed - indexed for MEDLINE]

20:

Comparative sequence analysis of Solanum and Arabidopsis in a hot spot for pathogen resistance on potato chromosome V reveals a patchwork of conserved and rapidly evolving genome segments.

Ballvora A, Jöcker A, Viehöver P, Ishihara H, Paal J, Meksem K, Bruggmann R, Schoof H, Weisshaar B, Gebhardt C.

BMC Genomics. 2007 May 2;8:112.

PMID: 17474978 [PubMed - indexed for MEDLINE]

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