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1:

Tandem repeat regions within the Burkholderia pseudomallei genome and their application for high resolution genotyping.

U'Ren JM, Schupp JM, Pearson T, Hornstra H, Friedman CL, Smith KL, Daugherty RR, Rhoton SD, Leadem B, Georgia S, Cardon M, Huynh LY, DeShazer D, Harvey SP, Robison R, Gal D, Mayo MJ, Wagner D, Currie BJ, Keim P.

BMC Microbiol. 2007 Mar 30;7:23.

PMID: 17397553 [PubMed - indexed for MEDLINE]

2:

Multilocus sequence typing and evolutionary relationships among the causative agents of melioidosis and glanders, Burkholderia pseudomallei and Burkholderia mallei.

Godoy D, Randle G, Simpson AJ, Aanensen DM, Pitt TL, Kinoshita R, Spratt BG.

J Clin Microbiol. 2003 May;41(5):2068-79. Erratum in: J Clin Microbiol. 2003 Oct;41(10):4913.

PMID: 12734250 [PubMed - indexed for MEDLINE]

4:

Genome-wide identification and mapping of variable sequences in the genomes of Burkholderia mallei and Burkholderia pseudomallei.

Fushan A, Monastyrskaya G, Abaev I, Kostina M, Filyukova O, Pecherskih E, Sverdlov E.

Res Microbiol. 2005 Mar;156(2):278-88. Epub 2004 Dec 1.

PMID: 15748995 [PubMed - indexed for MEDLINE]

5:

Burkholderia pseudomallei genome plasticity associated with genomic island variation.

Tumapa S, Holden MT, Vesaratchavest M, Wuthiekanun V, Limmathurotsakul D, Chierakul W, Feil EJ, Currie BJ, Day NP, Nierman WC, Peacock SJ.

BMC Genomics. 2008 Apr 25;9:190.

PMID: 18439288 [PubMed - indexed for MEDLINE]

6:

A horizontal gene transfer event defines two distinct groups within Burkholderia pseudomallei that have dissimilar geographic distributions.

Tuanyok A, Auerbach RK, Brettin TS, Bruce DC, Munk AC, Detter JC, Pearson T, Hornstra H, Sermswan RW, Wuthiekanun V, Peacock SJ, Currie BJ, Keim P, Wagner DM.

J Bacteriol. 2007 Dec;189(24):9044-9. Epub 2007 Oct 12.

PMID: 17933898 [PubMed - indexed for MEDLINE]

7:

Genomic fingerprinting of Burkholderia pseudomallei and B. mallei pathogens with DNA array based on interspecies sequence differences obtained by subtractive hybridization.

Fushan A, Monastyrskaya G, Abaev I, Sverdlov E.

Res Microbiol. 2006 Sep;157(7):684-92. Epub 2006 Mar 27.

PMID: 16621455 [PubMed - indexed for MEDLINE]

8:

Development of a polymerase chain reaction assay for the specific identification of Burkholderia mallei and differentiation from Burkholderia pseudomallei and other closely related Burkholderiaceae.

Ulrich RL, Ulrich MP, Schell MA, Kim HS, DeShazer D.

Diagn Microbiol Infect Dis. 2006 May;55(1):37-45. Epub 2006 Mar 20.

PMID: 16546342 [PubMed - indexed for MEDLINE]

9:

Cloning and analysis of genomic differences unique to Burkholderia pseudomallei by comparison with B. thailandensis.

Brown NF, Beacham IR.

J Med Microbiol. 2000 Nov;49(11):993-1001.

PMID: 11073153 [PubMed - indexed for MEDLINE]

10:

Detection and differentiation of Burkholderia pseudomallei, Burkholderia mallei and Burkholderia thailandensis by multiplex PCR.

Lee MA, Wang D, Yap EH.

FEMS Immunol Med Microbiol. 2005 Mar 1;43(3):413-7.

PMID: 15708316 [PubMed - indexed for MEDLINE]

11:

Worldwide genetic relationships among Francisella tularensis isolates determined by multiple-locus variable-number tandem repeat analysis.

Johansson A, Farlow J, Larsson P, Dukerich M, Chambers E, Byström M, Fox J, Chu M, Forsman M, Sjöstedt A, Keim P.

J Bacteriol. 2004 Sep;186(17):5808-18.

PMID: 15317786 [PubMed - indexed for MEDLINE]

12:

Genome-wide comparison reveals great inter- and intraspecies variability in B. pseudomallei and B. mallei pathogens.

Monastyrskaya G, Fushan A, Abaev I, Filyukova O, Kostina M, Pecherskih E, Sverdlov E.

Res Microbiol. 2004 Nov;155(9):781-93.

PMID: 15501656 [PubMed - indexed for MEDLINE]

13:

Rapid molecular typing of Burkholderia pseudomallei, isolated in an outbreak of melioidosis in Singapore in 2004, based on variable-number tandem repeats.

Liu Y, Loh JP, Aw LT, Yap EP, Lee MA, Ooi EE.

Trans R Soc Trop Med Hyg. 2006 Jul;100(7):687-92. Epub 2005 Dec 15.

PMID: 16343569 [PubMed - indexed for MEDLINE]

14:

Use of 16S rRNA gene sequencing for rapid identification and differentiation of Burkholderia pseudomallei and B. mallei.

Gee JE, Sacchi CT, Glass MB, De BK, Weyant RS, Levett PN, Whitney AM, Hoffmaster AR, Popovic T.

J Clin Microbiol. 2003 Oct;41(10):4647-54.

PMID: 14532197 [PubMed - indexed for MEDLINE]

15:

Strain typing of Borrelia burgdorferi, Borrelia afzelii, and Borrelia garinii by using multiple-locus variable-number tandem repeat analysis.

Farlow J, Postic D, Smith KL, Jay Z, Baranton G, Keim P.

J Clin Microbiol. 2002 Dec;40(12):4612-8.

PMID: 12454161 [PubMed - indexed for MEDLINE]

16:

Single gene target bacterial identification. groEL gene sequencing for discriminating clinical isolates of Burkholderia pseudomallei and Burkholderia thailandensis.

Woo PC, Woo GK, Lau SK, Wong SS, Yuen K.

Diagn Microbiol Infect Dis. 2002 Oct;44(2):143-9.

PMID: 12458120 [PubMed - indexed for MEDLINE]

17:

A tandem repeats database for bacterial genomes: application to the genotyping of Yersinia pestis and Bacillus anthracis.

Le Flèche P, Hauck Y, Onteniente L, Prieur A, Denoeud F, Ramisse V, Sylvestre P, Benson G, Ramisse F, Vergnaud G.

BMC Microbiol. 2001;1:2. Epub 2001 Mar 30.

PMID: 11299044 [PubMed - indexed for MEDLINE]

20:

Genomic patterns of pathogen evolution revealed by comparison of Burkholderia pseudomallei, the causative agent of melioidosis, to avirulent Burkholderia thailandensis.

Yu Y, Kim HS, Chua HH, Lin CH, Sim SH, Lin D, Derr A, Engels R, DeShazer D, Birren B, Nierman WC, Tan P.

BMC Microbiol. 2006 May 26;6:46.

PMID: 16725056 [PubMed - indexed for MEDLINE]

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