Human Plasma PeptideAtlas. [Proteomics. 2005]

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1: Proteomics. 2005 Aug;5(13):3497-500. Links

Human Plasma PeptideAtlas.

Deutsch EW, Eng JK, Zhang H, King NL, Nesvizhskii AI, Lin B, Lee H, Yi EC, Ossola R, Aebersold R.

Institute for Systems Biology, Seattle, WA 98103, USA. edeutsch@systemsbiology.org

Peptide identifications of high probability from 28 LC-MS/MS human serum and plasma experiments from eight different laboratories, carried out in the context of the HUPO Plasma Proteome Project, were combined and mapped to the EnsEMBL human genome. The 6929 distinct observed peptides were mapped to approximately 960 different proteins. The resulting compendium of peptides and their associated samples, proteins, and genes is made publicly available as a reference for future research on human plasma.

PMID: 16052627 [PubMed - indexed for MEDLINE]

A proteomic study of the HUPO Plasma Proteome Project's pilot samples using an accurate mass and time tag strategy. [Proteomics. 2005]
Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database. [Proteomics. 2005]
The human plasma proteome: analysis of Chinese serum using shotgun strategy. [Proteomics. 2005]
ReviewPeptideAtlas: a resource for target selection for emerging targeted proteomics workflows. [EMBO Rep. 2008]
ReviewQuantitative proteome mapping of nitrotyrosines. [Methods Enzymol. 2008]

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Human Plasma PeptideAtlas.

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