76.
The arbuscular mycorrhizal status has an impact on the transcriptome profile and amino acid composition of tomato fruit
Alessandra
Salvioli,
Inès
Zouari,
Michel
Chalot,
Paola
Bonfante
BMC Plant Biology 2012, 12 :44 (27 March 2012)
Abstract | Full text | PDF | PubMed
77.
Host-pathogen interactome mapping for HTLV-1 and -2 retroviruses
Nicolas
Simonis,
Jean-François
Rual,
Irma
Lemmens,
Mathieu
Boxus,
Tomoko
Hirozane-Kishikawa,
Jean-Stéphane
Gatot,
Amélie
Dricot,
Tong
Hao,
Didier
Vertommen,
Sébastien
Legros,
Sarah
Daakour,
Niels
Klitgord,
Maud
Martin,
Jean-François
Willaert,
Franck
Dequiedt,
Vincent
Navratil,
Michael
E
Cusick,
Arsène
Burny,
Carine
Van Lint,
David
E
Hill,
Jan
Tavernier,
Richard
Kettmann,
Marc
Vidal,
Jean-Claude
Twizere
Retrovirology 2012, 9 :26 (29 March 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
This work employed a scalable methodology for the systematic mapping and comparison of pathogen-host protein interactions that includes stringent yeast two-hybrid screening and systematic retest, as well as two independent validations through an additional protein interaction detection method and a functional transactivation assay. The authors found 166 interactions between 10 viral proteins and 122 human proteins.
78.
Identification of genes involved in the ACC-mediated control of root cell elongation in Arabidopsis thaliana
Marios
Markakis,
Tinne
De Cnodder,
Michal
Lewandowski,
Damien
Simon,
Agnieszka
Boron,
Daria
Balcerowicz,
Thanaa
Doubbo,
Ludivine
Taconnat,
Jean-Pierre
Renou,
Herman
Höfte,
Jean-Pierre
Verbelen,
Kris
Vissenberg
BMC Plant Biology 2012, 12 :208 (7 November 2012)
Abstract | Full text | PDF | PubMed
79.
Dietary vegetable oils do not alter the intestine transcriptome of gilthead sea bream (Sparus aurata ), but modulate the transcriptomic response to infection with Enteromyxum leei
Josep
A
Calduch-Giner,
Ariadna
Sitjà-Bobadilla,
Grace
C
Davey,
Michael
T
Cairns,
Sadasivam
Kaushik,
Jaume
Pérez-Sánchez
BMC Genomics 2012, 13 :470 (11 September 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
80.
A simple and efficient method for the long-term preservation of plant cell suspension cultures
Anne-Marie
Boisson,
Elisabeth
Gout,
Richard
Bligny,
Corinne
Rivasseau
Plant Methods 2012, 8 :4 (30 January 2012)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
The authors describe a very convenient way to preserve plant cell cultures that doesn't require any specialised equipment and avoids the use of freezing. A combination of low temperature (5oC) and a phosphate-free medium allows the cells to remain viable for 6 months and, importantly to resume active growth without a lag when they are returned to standard culture conditions.
81.
A genomics approach to understanding the role of auxin in apple (Malus x domestica) fruit size control
Fanny
Devoghalaere,
Thomas
Doucen,
Baptiste
Guitton,
Jeannette
Keeling,
Wendy
Payne,
Toby
Ling,
John
Ross,
Ian
Hallett,
Kularajathevan
Gunaseelan,
GA
Dayatilake,
Robert
Diak,
Ken
C
Breen,
D Stuart
Tustin,
Evelyne
Costes,
David
Chagné,
Robert
Schaffer,
Karine
David
BMC Plant Biology 2012, 12 :7 (13 January 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
82.
Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes
Anthony
Levasseur,
Elodie
Drula,
Vincent
Lombard,
Pedro
M
Coutinho,
Bernard
Henrissat
Biotechnology for Biofuels 2013, 6 :41 (21 March 2013)
Abstract | Full text | PDF | PubMed
83.
Guidelines for the diagnosis and management of chylomicron retention disease based on a review of the literature and the experience of two centers
Noel
Peretti,
Agnès
Sassolas,
Claude
C
Roy,
Colette
Deslandres,
Mathilde
Charcosset,
Justine
Castagnetti,
Laurence
Pugnet-Chardon,
Philippe
Moulin,
Sylvie
Labarge,
Lise
Bouthillier,
Alain
Lachaux,
Emile
Levy
Orphanet Journal of Rare Diseases 2010, 5 :24 (29 September 2010)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
84.
Nutrigenomics in honey bees: digital gene expression analysis of pollen's nutritive effects on healthy and varroa-parasitized bees
Cédric
Alaux,
Christelle
Dantec,
Hughes
Parrinello,
Yves
Le Conte
BMC Genomics 2011, 12 :496 (10 October 2011)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
85.
A high utility integrated map of the pig genome
Sean
J
Humphray,
Carol
E
Scott,
Richard
Clark,
Brandy
Marron,
Clare
Bender,
Nick
Camm,
Jayne
Davis,
Andrew
Jenks,
Angela
Noon,
Manish
Patel,
Harminder
Sehra,
Fengtang
Yang,
Margarita
B
Rogatcheva,
Denis
Milan,
Patrick
Chardon,
Gary
Rohrer,
Dan
Nonneman,
Pieter
de Jong,
Stacey
N
Meyers,
Alan
Archibald,
Jonathan
E
Beever,
Lawrence
B
Schook,
Jane
Rogers
Genome Biology 2007, 8 :R139 (11 July 2007)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
A new physical map of the bovine genome has been constructed by integrating data from genetic and radiation hybrid maps, and a new bovine BAC map, with the bovine genome draft assembly.
86.
Detecting long tandem duplications in genomic sequences
Eric
Audemard,
Thomas
Schiex,
Thomas
Faraut
BMC Bioinformatics 2012, 13 :83 (8 May 2012)
Abstract | Full text | PDF | PubMed
87.
Inference on population history and model checking using DNA sequence and microsatellite data with the software DIYABC (v1.0)
Jean-Marie
Cornuet,
Virgine
Ravigné,
Arnaud
Estoup
BMC Bioinformatics 2010, 11 :401 (28 July 2010)
Abstract | Full text | PDF | PubMed
88.
The Arabidopsis thaliana-Alternaria brassicicola pathosystem: A model interaction for investigating seed transmission of necrotrophic fungi
Stephanie
Pochon,
Emmanuel
Terrasson,
Thomas
Guillemette,
Beatrice
Iacomi-Vasilescu,
Sonia
Georgeault,
Marjorie
Juchaux,
Romain
Berruyer,
Isabelle
Debeaujon,
Philippe
Simoneau,
Claire
Campion
Plant Methods 2012, 8 :16 (9 May 2012)
Abstract | Full text | PDF | PubMed
89.
Biogenic amine production by the wine Lactobacillus brevis IOEB 9809 in systems that partially mimic the gastrointestinal tract stress
Pasquale
Russo,
Pilar
Fernández de Palencia,
Andrea
Romano,
María
Fernández,
Patrick
Lucas,
Giuseppe
Spano,
Paloma
López
BMC Microbiology 2012, 12 :247 (31 October 2012)
Abstract | Full text | PDF | PubMed
90.
Functional Annotation, Genome Organization and Phylogeny of the Grapevine (Vitis vinifera ) Terpene Synthase Gene Family Based on Genome Assembly, FLcDNA Cloning, and Enzyme Assays
Diane
M
Martin,
Sébastien
Aubourg,
Marina
B
Schouwey,
Laurent
Daviet,
Michel
Schalk,
Omid
Toub ,
Steven
T
Lund,
Jörg
Bohlmann
BMC Plant Biology 2010, 10 :226 (21 October 2010)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
91.
Protein secretion in Lactococcus lactis : an efficient way to increase the overall heterologous protein production
Yves
Le Loir,
Vasco
Azevedo,
Sergio
C
Oliveira,
Daniela
A
Freitas,
Anderson
Miyoshi,
Luis
G
Bermúdez-Humarán,
Sébastien
Nouaille,
Luciana
A
Ribeiro,
Sophie
Leclercq,
Jane
E
Gabriel,
Valeria
D
Guimaraes,
Maricê
N
Oliveira,
Cathy
Charlier,
Michel
Gautier,
Philippe
Langella
Microbial Cell Factories 2005, 4 :2 (4 January 2005)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
92.
Lactococci and lactobacilli as mucosal delivery vectors for therapeutic proteins and DNA vaccines
Luis
G
Bermúdez-Humarán,
Pascale
Kharrat,
Jean-Marc
Chatel,
Philippe
Langella
Microbial Cell Factories 2011, 10 (Suppl 1):S4 (30 August 2011)
Abstract | Full text | PDF | PubMed
93.
A physical map of the bovine genome
Warren
M
Snelling,
Readman
Chiu,
Jacqueline
E
Schein,
Matthew
Hobbs,
Colette
A
Abbey,
David
L
Adelson,
Jan
Aerts,
Gary
L
Bennett,
Ian
E
Bosdet,
Mekki
Boussaha,
Rudiger
Brauning,
Alexandre
R
Caetano,
Marcos
M
Costa,
Allan
M
Crawford,
Brian
P
Dalrymple,
André
Eggen,
Annelie
Everts-van der Wind,
Sandrine
Floriot,
Mathieu
Gautier,
Clare
A
Gill,
Ronnie
D
Green,
Robert
Holt,
Oliver
Jann,
Steven
JM
Jones,
Steven
M
Kappes,
John
W
Keele,
Pieter
J
de Jong,
Denis
M
Larkin,
Harris
A
Lewin,
John
C
McEwan
et al.
Genome Biology 2007, 8 :R165 (14 August 2007)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
A new physical map of the bovine genome has been constructed by integrating data from genetic and radiation hybrid maps, and a new bovine BAC map, with the bovine genome draft assembly.
94.
The embryonic leaf identity gene FUSCA3 regulates vegetative phase transitions by negatively modulating ethylene-regulated gene expression in Arabidopsis
Shelley
Lumba,
Yuichiro
Tsuchiya,
Frederic
Delmas,
Jodi
Hezky,
Nicholas
J
Provart,
Qing
Shi Lu,
Peter
McCourt,
Sonia
Gazzarrini
BMC Biology 2012, 10 :8 (20 February 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
The transcription factor FUSCA3 is a temporal regulator of plant development, usually acting in the early embryo, but activation after germination results in interaction with ethylene signaling to control the timing of adult leaf development.
95.
Deciphering the genomic structure, function and evolution of carotenogenesis related phytoene synthases in grasses
Bianca
Dibari,
Florent
Murat,
Audrey
Chosson,
Véronique
Gautier,
Charles
Poncet,
Philippe
Lecomte,
Ingrid
Mercier,
Hélène
Bergès,
Caroline
Pont,
Antonio
Blanco,
Jérôme
Salse
BMC Genomics 2012, 13 :221 (6 June 2012)
Abstract | Full text | PDF | PubMed
96.
Phylogeny and evolution of life-history strategies in the Sycophaginae non-pollinating fig wasps (Hymenoptera, Chalcidoidea)
Astrid
Cruaud,
Roula
Jabbour-Zahab,
Gwenaëlle
Genson,
Finn
Kjellberg,
Noppol
Kobmoo,
Simon
van Noort,
Yang
Da-Rong,
Peng
Yan-Qiong,
Rosichon
Ubaidillah,
Paul
E
Hanson,
Otilene
Santos-Mattos,
Fernando
HA
Farache,
Rodrigo
AS
Pereira,
Carole
Kerdelhué,
Jean-Yves
Rasplus
BMC Evolutionary Biology 2011, 11 :178 (22 June 2011)
Abstract | Full text | PDF | PubMed
97.
Cluster analysis application identifies muscle characteristics of importance for beef tenderness
Sghaier
Chriki,
Graham
E
Gardner,
Catherine
Jurie,
Brigitte
Picard,
Didier
Micol,
Jean-Paul
Brun,
Laurent
Journaux,
Jean-Francois
Hocquette
BMC Biochemistry 2012, 13 :29 (22 December 2012)
Abstract | Full text | PDF | PubMed
98.
Origin and evolution of the Notch signalling pathway: an overview from eukaryotic genomes
Eve
Gazave,
Pascal
Lapébie,
Gemma
S
Richards,
Frédéric
Brunet,
Alexander
V
Ereskovsky,
Bernard
M
Degnan,
Carole
Borchiellini,
Michel
Vervoort,
Emmanuelle
Renard
BMC Evolutionary Biology 2009, 9 :249 (13 October 2009)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
99.
Genome Alteration Print (GAP): a tool to visualize and mine complex cancer genomic profiles obtained by SNP arrays
Tatiana
Popova,
Elodie
Manié,
Dominique
Stoppa-Lyonnet,
Guillem
Rigaill,
Emmanuel
Barillot,
Marc
Stern
Genome Biology 2009, 10 :R128 (11 November 2009)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
GAP, a method for analyzing complex cancer genome profiles from SNP arrays, performs well even with poor quality data and rearranged genomes
100.
A neurochemical map of the developing amphioxus nervous system
Simona
Candiani,
Luca
Moronti,
Paola
Ramoino,
Michael
Schubert,
Mario
Pestarino
BMC Neuroscience 2012, 13 :59 (7 June 2012)
Abstract | Full text | PDF | PubMed |