1.
Tender coconut water an economical growth medium for the production of recombinant proteins in Escherichia coli
Narendrakumar
Sekar,
Soumya
Veetil,
Muniasamy
Neerathilingam
BMC Biotechnology 2013, 13 :70 (2 September 2013)
Abstract | Full text | PDF | PubMed
2.
β -Keto esters from ketones and ethyl chloroformate: a rapid, general, efficient synthesis of pyrazolones and their antimicrobial, in silico and in vitro cytotoxicity studies
Ramasamy
Ragavan,
Kalavathi
Kumar,
Vijayaparthasarathi
Vijayakumar,
Sundaramoorthy
Sarveswari,
Sudha
Ramaiah,
Anand
Anbarasu,
Sivashanmugam
Karthikeyan,
Periyasamy
Giridharan,
Nalilu
Kumari
Organic and Medicinal Chemistry Letters 2013, 3 :6 (19 July 2013)
Abstract | Full text | PDF | PubMed
|
Graphical abstract
3.
Estimating the fraction of falsely detected spikes in high density microelectrode array recordings based on correlations
Jens-Oliver
Muthmann,
Hayder
Amin,
Alessandro
Maccione,
Evelyne
Sernagor,
Luca
Berdondini,
Matthias
H
Hennig,
Upinder
S
Bhalla
BMC Neuroscience 2013, 14 (Suppl 1):P25 (8 July 2013)
Full text | PDF
4.
Vertebrate GAGA factor associated insulator elements demarcate homeotic genes in the HOX clusters
Surabhi
Srivastava,
Deepika
Puri,
Hita
Garapati,
Jyotsna
Dhawan,
Rakesh
K
Mishra
Epigenetics & Chromatin 2013, 6 :8 (22 April 2013)
Abstract | Full text | PDF | PubMed
5.
Structural attributes for the recognition of weak and anomalous regions in coiled-coils of myosins and other motor proteins
Margaret S
Sunitha,
Anu
G
Nair,
Amol
Charya,
Kamalakar
Jadhav,
Sami
Mukhopadhyay,
Ramanathan
Sowdhamini
BMC Research Notes 2012, 5 :530 (25 September 2012)
Abstract | Full text | PDF | PubMed
6.
Re-visiting protein-centric two-tier classification of existing DNA-protein complexes
Sony
Malhotra,
Ramanathan
Sowdhamini
BMC Bioinformatics 2012, 13 :165 (16 July 2012)
Abstract | Full text | PDF | PubMed
7.
Relationship between amino acid properties and functional parameters in olfactory receptors and discrimination of mutants with enhanced specificity
M Michael
Gromiha,
K
Harini,
R
Sowdhamini,
Kazuhiko
Fukui
BMC Bioinformatics 2012, 13 (Suppl 7):S1 (8 May 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
8.
Functional repertoire, molecular pathways and diseases associated with 3D domain swapping in the human proteome
Khader
Shameer,
Ramanathan
Sowdhamini
Journal of Clinical Bioinformatics 2012, 2 :8 (3 April 2012)
Abstract | Full text | PDF | PubMed
9.
Evolutionary traces decode molecular mechanism behind fast pace of myosin XI
Divya
P
Syamaladevi,
R
Sowdhamini
BMC Structural Biology 2011, 11 :35 (26 September 2011)
Abstract | Full text | PDF | PubMed
10.
Inferring ion channel densities from spike data
Oliver
Muthmann,
Matthias
H
Hennig,
Upinder
S
Bhalla
BMC Neuroscience 2011, 12 (Suppl 1):P12 (18 July 2011)
Full text | PDF
11.
Diverse and tissue-enriched small RNAs in the plant pathogenic fungus, Magnaporthe oryzae
Cristiano
C
Nunes,
Malali
Gowda,
Joshua
Sailsbery,
Minfeng
Xue,
Feng
Chen,
Douglas
E
Brown,
YeonYee
Oh,
Thomas
K
Mitchell,
Ralph
A
Dean
BMC Genomics 2011, 12 :288 (2 June 2011)
Abstract | Full text | PDF | PubMed
12.
Identification and analysis of a glutamatergic local interneuron lineage in the adult Drosophila olfactory system
Abhijit
Das,
Albert
Chiang,
Sejal
Davla,
Rashi
Priya,
Heinrich
Reichert,
K
VijayRaghavan,
Veronica
Rodrigues
Neural Systems & Circuits 2011, 1 :4 (26 January 2011)
Abstract | Full text | PDF
13.
A novel informatics concept for high-throughput shotgun lipidomics based on the molecular fragmentation query language
Ronny
Herzog,
Dominik
Schwudke,
Kai
Schuhmann,
Julio
L
Sampaio,
Stefan
R
Bornstein,
Michael
Schroeder,
Andrej
Shevchenko
Genome Biology 2011, 12 :R8 (19 January 2011)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
A novel method for lipid identification from all mass spectrometry platforms is presented within the software LipidXplorer
14.
PeptideMine - A webserver for the design of peptides for protein-peptide binding studies derived from protein-protein interactomes
Khader
Shameer,
Lalima
L
Madan,
Shivamurthy
Veeranna,
Balasubramanian
Gopal,
Ramanathan
Sowdhamini
BMC Bioinformatics 2010, 11 :473 (22 September 2010)
Abstract | Full text | PDF | PubMed
15.
An evaluation of the PCR-RFLP technique to aid molecular-based monitoring of felids and canids in India
Shomita
Mukherjee,
Ashalakshmi
CN,
Chandrima
Home,
Uma
Ramakrishnan
BMC Research Notes 2010, 3 :159 (7 June 2010)
Abstract | Full text | PDF | PubMed
16.
Systematic search for putative new domain families in Mycoplasma gallisepticum genome
Chilamakuri
CS
Reddy,
Sane
Rani,
Bernard
Offmann,
R
Sowdhamini
BMC Research Notes 2010, 3 :98 (12 April 2010)
Abstract | Full text | PDF | PubMed
17.
HORI: a web server to compute Higher Order Residue Interactions in protein structures
Pandurangan
Sundaramurthy,
Khader
Shameer,
Raashi
Sreenivasan,
Sunita
Gakkhar,
Ramanathan
Sowdhamini
BMC Bioinformatics 2010, 11 (Suppl 1):S24 (18 January 2010)
Abstract | Full text | PDF | PubMed
18.
Evaluating epistatic interaction signals in complex traits using quantitative traits
Odity
Mukherjee,
Krishna
Sanapala,
Padmanabhan
Anbazhagana,
Saurabh
Ghosh
BMC Proceedings 2009, 3 (Suppl 7):S82 (15 December 2009)
Abstract | Full text | PDF | PubMed
19.
Multiscale modeling and interoperability in MOOSE
Niraj
Dudani,
Subhasis
Ray,
Siji
George,
Upinder
S
Bhalla
BMC Neuroscience 2009, 10 (Suppl 1):P54 (13 July 2009)
Full text | PDF
20.
Analysis on conservation of disulphide bonds and their structural features in homologous protein domain families
Ratna
R
Thangudu,
Malini
Manoharan,
N
Srinivasan,
Frédéric
Cadet,
R
Sowdhamini,
Bernard
Offmann
BMC Structural Biology 2008, 8 :55 (26 December 2008)
Abstract | Full text | PDF | PubMed
21.
Drosophila olfactory local interneurons and projection neurons derive from a common neuroblast lineage specified by the empty spiracles gene
Abhijit
Das,
Sonia
Sen,
Robert
Lichtneckert,
Ryuichi
Okada,
Kei
Ito,
Veronica
Rodrigues,
Heinrich
Reichert
Neural Development 2008, 3 :33 (3 December 2008)
Abstract | Full text | PDF | PubMed
22.
Genome-wide survey of prokaryotic serine proteases: Analysis of distribution and domain architectures of five serine protease families in prokaryotes
Lokesh
P
Tripathi,
R
Sowdhamini
BMC Genomics 2008, 9 :549 (19 November 2008)
Abstract | Full text | PDF | PubMed
23.
Modules in molecular memory
Upinder
S
Bhalla
BMC Neuroscience 2008, 9 (Suppl 1):L2 (11 July 2008)
Full text | PDF
24.
CUSP: an algorithm to distinguish structurally conserved and unconserved regions in protein domain alignments and its application in the study of large length variations
Sankaran
Sandhya,
Barah
Pankaj,
Madabosse
Govind,
Bernard
Offmann,
Narayanaswamy
Srinivasan,
Ramanathan
Sowdhamini
BMC Structural Biology 2008, 8 :28 (31 May 2008)
Abstract | Full text | PDF | PubMed
25.
Metamorphosis of an identified serotonergic neuron in the Drosophila olfactory system
Bidisha
Roy,
Ajeet
P
Singh,
Chetak
Shetty,
Varun
Chaudhary,
Annemarie
North,
Matthias
Landgraf,
K
VijayRaghavan,
Veronica
Rodrigues
Neural Development 2007, 2 :20 (24 October 2007)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central