1.
Barnacle: detecting and characterizing tandem duplications and fusions in transcriptome assemblies
Lucas
Swanson,
Gordon
Robertson,
Karen
L
Mungall,
Yaron
S
Butterfield,
Readman
Chiu,
Richard
D
Corbett,
T
Docking,
Donna
Hogge,
Shaun
D
Jackman,
Richard
A
Moore,
Andrew
J
Mungall,
Ka
Nip,
Jeremy
DK
Parker,
Jenny
Qian,
Anthony
Raymond,
Sandy
Sung,
Angela
Tam,
Nina
Thiessen,
Richard
Varhol,
Sherry
Wang,
Deniz
Yorukoglu,
YongJun
Zhao,
Pamela
A
Hoodless,
S
Sahinalp,
Aly
Karsan,
Inanc
Birol
BMC Genomics 2013, 14 :550 (14 August 2013)
Abstract | Full text | PDF | PubMed
2.
Cost-effectiveness of MRI for breast cancer screening in BRCA1/2 mutation carriers
Reka
Pataky,
Linlea
Armstrong,
Stephen
Chia,
Andrew
J
Coldman,
Charmaine
Kim-Sing,
Barbara
McGillivray,
Jenna
Scott,
Christine
M
Wilson,
Stuart
Peacock
BMC Cancer 2013, 13 :339 (10 July 2013)
Abstract | Full text | PDF | PubMed
3.
Oh baby! Motivation for healthy eating during parenthood transitions: a longitudinal examination with a theory of planned behavior perspective
Rebecca
L
Bassett-Gunter,
Ryna
Levy-Milne,
Patti Jean
Naylor,
Danielle
Symons Downs,
Cecilia
Benoit,
Darren E R
Warburton,
Chris
M
Blanchard,
Ryan
E
Rhodes
International Journal of Behavioral Nutrition and Physical Activity 2013, 10 :88 (6 July 2013)
Abstract | Full text | PDF | PubMed
4.
A phase II study of sorafenib (BAY 43–9006) in recurrent diffuse large B cell lymphoma: an eastern cooperative oncology group study (E1404)
Daniel
R
Greenwald,
Hailun
Li,
Selina
M
Luger,
Ronald
S
Go,
David
King,
Taral
Patel,
Randy
D
Gascoyne,
Jill
Kolesar,
Brad
S
Kahl,
Sandra
Horning
Journal of Hematology & Oncology 2013, 6 :46 (5 July 2013)
Abstract | Full text | PDF | PubMed
5.
The prevalence of human papillomavirus and its impact on cervical dysplasia in Northern Canada
Ying
Jiang,
Paul
Brassard,
Alberto
Severini,
Yang
Mao,
Y
Li,
Julie
Laroche,
Susan
Chatwood,
Andre
Corriveau,
Kami
Kandola,
Brendan
Hanley,
Isaac
Sobol,
Muna
Ar-Rushdi,
Gordon
Johnson,
Jane
Lo,
Sam
Ratnam,
Tom
Wong,
Alain
Demers,
Gayatri
Jayaraman,
Stephanie
Totten,
Howard
Morrison
Infectious Agents and Cancer 2013, 8 :25 (1 July 2013)
Abstract | Full text | PDF | PubMed
6.
Identifying cancer mutation targets across thousands of samples: MuteProc, a high throughput mutation analysis pipeline
Alireza
Hadj Khodabakhshi,
Anthony
P
Fejes,
Inanc
Birol,
Steven
JM
Jones
BMC Bioinformatics 2013, 14 :167 (28 May 2013)
Abstract | Full text | PDF | PubMed
7.
Co-occurrence of anaerobic bacteria in colorectal carcinomas
René
L
Warren,
Douglas
J
Freeman,
Stephen
Pleasance,
Peter
Watson,
Richard
A
Moore,
Kyla
Cochrane,
Emma
Allen-Vercoe,
Robert
A
Holt
Microbiome 2013, 1 :16 (15 May 2013)
Abstract | Full text | PDF
8.
Mortality among British Columbians testing for hepatitis C antibody
Amanda
Yu,
John
J
Spinelli,
Darrel
A
Cook,
Jane
A
Buxton,
Mel
Krajden
BMC Public Health 2013, 13 :291 (2 April 2013)
Abstract | Full text | PDF | PubMed
9.
Enhancing the scoping study methodology: a large, inter-professional team’s experience with Arksey and O’Malley’s framework
Helena ML
Daudt,
Catherine
van Mossel,
Samantha
J
Scott
BMC Medical Research Methodology 2013, 13 :48 (23 March 2013)
Abstract | Full text | PDF | PubMed
10.
Template-based breast IMRT planning for increased workload efficiency
Sonia Kim Anh
Nguyen,
Fred
Cao,
Ramani
Ramaseshan,
Sarah
Kristensen,
Krista
Kuncewicz,
Vicky
Huang,
Craig
Elith,
Peter
Steiner,
Jennifer
Hayes,
Beverly
Lester,
Cheryl
McGregor,
Bilal
Shahine,
Winkle
Kwan
Radiation Oncology 2013, 8 :67 (20 March 2013)
Abstract | Full text | PDF | PubMed
11.
Cyclin D1 overexpression is associated with poor prognosis in oropharyngeal cancer
Rui Jun
Lin,
Tarinee
Lubpairee,
Kelly
Y
Liu,
Donald
W
Anderson,
Scott
Durham,
Catherine
F
Poh
Journal of Otolaryngology - Head and Neck Surgery 2013, 42 :23 (19 March 2013)
Abstract | Full text | PDF | PubMed
12.
Molecular features in arsenic-induced lung tumors
Roland
Hubaux,
Daiana
D
Becker-Santos,
Katey
SS
Enfield,
David
Rowbotham,
Stephen
Lam,
Wan
L
Lam,
Victor
D
Martinez
Molecular Cancer 2013, 12 :20 (19 March 2013)
Abstract | Full text | PDF | PubMed
13.
Small cell ovarian carcinoma: genomic stability and responsiveness to therapeutics
Lisa
F
Gamwell,
Karen
Gambaro,
Maria
Merziotis,
Colleen
Crane,
Suzanna
L
Arcand,
Valerie
Bourada,
Christopher
Davis,
Jeremy
A
Squire,
David
G
Huntsman,
Patricia
N
Tonin,
Barbara
C
Vanderhyden
Orphanet Journal of Rare Diseases 2013, 8 :33 (21 February 2013)
Abstract | Full text | PDF | PubMed
14.
Time series analysis of fine particulate matter and asthma reliever dispensations in populations affected by forest fires
Catherine
T
Elliott,
Sarah
B
Henderson,
Victoria
Wan
Environmental Health 2013, 12 :11 (28 January 2013)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
Dr C. Elliott and colleagues monitor the impact of chronic lung diseases by measuring dispensation of Salubutamol in forest fire afflicted regions in British Columbia.
15.
Population-based outcomes after brain radiotherapy in patients with brain metastases from breast cancer in the Pre-Trastuzumab and Trastuzumab eras
Irene
Karam,
Sarah
Hamilton,
Alan
Nichol,
Ryan
Woods,
Caroline
Speers,
Hagen
Kennecke,
Scott
Tyldesley
Radiation Oncology 2013, 8 :12 (9 January 2013)
Abstract | Full text | PDF | PubMed
16.
DriverNet: uncovering the impact of somatic driver mutations on transcriptional networks in cancer
Ali
Bashashati,
Gholamreza
Haffari,
Jiarui
Ding,
Gavin
Ha,
Kenneth
Lui,
Jamie
Rosner,
David
G
Huntsman,
Carlos
Caldas,
Samuel
A
Aparicio,
Sohrab
P
Shah
Genome Biology 2012, 13 :R124 (22 December 2012)
Abstract | Full text | PDF | PubMed |
|
Editor’s summary
DriverNet is a method for identifying driver mutations in cancer samples based on their effects on the transcriptional network
17.
Derivation of HLA types from shotgun sequence datasets
René
L
Warren,
Gina
Choe,
Douglas
J
Freeman,
Mauro
Castellarin,
Sarah
Munro,
Richard
Moore,
Robert
A
Holt
Genome Medicine 2012, 4 :95 (10 December 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
HLAminer is a computational tool to identify Human Leukocyte Antigen (HLA) alleles directly from sequence reads, reducing the need for targeted amplification of HLA-specific gene segments.
18.
Engaging people who use drugs in policy and program development: A review of the literature
Lianping
Ti,
Despina
Tzemis,
Jane
A
Buxton
Substance Abuse Treatment, Prevention, and Policy 2012, 7 :47 (24 November 2012)
Abstract | Full text | PDF | PubMed
19.
Quantitative hormone therapy follow-up in an ER+/ERα KD mouse tumor model using FDG and [11 C]-methionine PET imaging
Michel
Paquette,
Sébastien
Tremblay,
Francois
Bénard,
Roger
Lecomte
EJNMMI Research 2012, 2 :61 (9 November 2012)
Abstract | Full text | PDF | PubMed
20.
Trends in postpartum hemorrhage from 2000 to 2009: a population-based study
Azar
Mehrabadi,
Jennifer
A
Hutcheon,
Lily
Lee,
Robert
M
Liston,
KS
Joseph
BMC Pregnancy and Childbirth 2012, 12 :108 (11 October 2012)
Abstract | Full text | PDF | PubMed
21.
Stereotactic ablative radiotherapy for comprehensive treatment of oligometastatic tumors (SABR-COMET): Study protocol for a randomized phase II trial
David
A
Palma,
Cornelis J
A
Haasbeek,
George
B
Rodrigues,
Max
Dahele,
Michael
Lock,
Brian
Yaremko,
Robert
Olson,
Mitchell
Liu,
Jason
Panarotto,
GwendolynHMJ
Griffioen,
Stewart
Gaede,
Ben
Slotman,
Suresh
Senan
BMC Cancer 2012, 12 :305 (23 July 2012)
Abstract | Full text | PDF | PubMed
22.
Structural characterization of S100A15 reveals a novel zinc coordination site among S100 proteins and altered surface chemistry with functional implications for receptor binding
Jill
I
Murray,
Michelle
L
Tonkin,
Amanda
L
Whiting,
Fangni
Peng,
Benjamin
Farnell,
Jay
T
Cullen,
Fraser
Hof,
Martin
J
Boulanger
BMC Structural Biology 2012, 12 :16 (2 July 2012)
Abstract | Full text | PDF | PubMed
23.
Relationships between family physicians’ referral for palliative radiotherapy, knowledge of indications for radiotherapy, and prior training: a survey of rural and urban family physicians
Robert
A
Olson,
Sonca
Lengoc,
Scott
Tyldesley,
John
French,
Colleen
McGahan,
Jenny
Soo
Radiation Oncology 2012, 7 :73 (18 May 2012)
Abstract | Full text | PDF | PubMed
24.
Genetic basis of transcriptome differences between the founder strains of the rat HXB/BXH recombinant inbred panel
Marieke
Simonis,
Santosh
S
Atanur,
Sam
Linsen,
Victor
Guryev,
Frans-Paul
Ruzius,
Laurence
Game,
Nico
Lansu,
Ewart
de Bruijn,
Sebastiaan
van Heesch,
Steven
JM
Jones,
Michal
Pravenec,
Tim
J
Aitman,
Edwin
Cuppen
Genome Biology 2012, 13 :r31 (27 April 2012)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
The genome and transcriptome sequences of the founder strains of the HXB/BXH panel of recombinant inbred rat strains
25.
Benign serous ovarian tumour: a redefining moment?
Sally
Hunter,
Kylie
Gorringe,
Michael
Anglesio,
Raghwa
Sharma,
Blake
Gilks,
Anna
deFazio,
David
Huntsman,
Ian
Campbell
Hereditary Cancer in Clinical Practice 2012, 10 (Suppl 2):A83 (12 April 2012)
Full text | PDF