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Work published with BioMed Central, Chemistry Central and SpringerOpen by researchers at Delft University of Technology

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1.

Review   Open Access

Topology of molecular interaction networks

Wynand Winterbach, Piet Van Mieghem, Marcel Reinders, Huijuan Wang, Dick de Ridder BMC Systems Biology 2013, 7:90 (16 September 2013)

Abstract | Provisional PDF | PubMed

2.

Research   Open Access

Carbon dioxide fixation by Calvin-Cycle enzymes improves ethanol yield in yeast

Víctor Guadalupe-Medina, H Wisselink, Marijke AH Luttik, Erik de Hulster, Jean-Marc Daran, Jack T Pronk, Antonius JA van Maris Biotechnology for Biofuels 2013, 6:125 (29 August 2013)

Abstract | Full text | PDF | PubMed

3.

Research   Open Access

Agent-based modeling and simulation of emergent behavior in air transportation

Soufiane Bouarfa, Henk AP Blom, Richard Curran, Mariken HC Everdij Complex Adaptive Systems Modeling 2013, 1:15 (15 August 2013)

Abstract | Full text | PDF

4.

Research   Open Access Highly Accessed

Identification and systematic annotation of tissue-specific differentially methylated regions using the Illumina 450k array

Roderick C Slieker, Steffan D Bos, Jelle J Goeman, Judith VMG Bovée, Rudolf P Talens, Ruud van der Breggen, H Eka D Suchiman, Eric-Wubbo Lameijer, Hein Putter, Erik B van den Akker, Yanju Zhang, J Jukema, P Slagboom, Ingrid Meulenbelt, Bastiaan T Heijmans Epigenetics & Chromatin 2013, 6:26 (6 August 2013)

Abstract | Full text | PDF | PubMed

5.

Research   Open Access

Differentiation between non-neural and neural contributors to ankle joint stiffness in cerebral palsy

Karin L de Gooijer-van de Groep, Erwin de Vlugt, Jurriaan H de Groot, Hélène CM van der Heijden-Maessen, Dennis HM Wielheesen, Rietje (M) S van Wijlen-Hempel, J Arendzen, Carel GM Meskers Journal of NeuroEngineering and Rehabilitation 2013, 10:81 (23 July 2013)

Abstract | Full text | PDF | PubMed

6.

Software   Open Access Highly Accessed

RCytoscape: tools for exploratory network analysis

Paul T Shannon, Mark Grimes, Burak Kutlu, Jan J Bot, David J Galas BMC Bioinformatics 2013, 14:217 (9 July 2013)

Abstract | Full text | PDF | PubMed

7.

Nano Express   Open Access

Quantum interference effects at room temperature in OPV-based single-molecule junctions

Carlos R Arroyo, Riccardo Frisenda, Kasper Moth-Poulsen, Johannes S Seldenthuis, Thomas Bjørnholm, Herre SJ van der Zant Nanoscale Research Letters 2013, 8:234 (16 May 2013)

Abstract | Full text | PDF | PubMed

8.

Technical Notes   Open Access

A versatile, efficient strategy for assembly of multi-fragment expression vectors in Saccharomyces cerevisiae using 60 bp synthetic recombination sequences

Niels GA Kuijpers, Daniel Solis-Escalante, Lizanne Bosman, Marcel van den Broek, Jack T Pronk, Jean-Marc Daran, Pascale Daran-Lapujade Microbial Cell Factories 2013, 12:47 (10 May 2013)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

9.

Research   Open Access

The Dirichlet problem for the Laplace equation in supershaped annuli

Diego Caratelli, Johan Gielis, Ilia Tavkhelidze, Paolo E Ricci Boundary Value Problems 2013, 2013:113 (3 May 2013)

Abstract | Full text | PDF

10.

Research   Open Access

The effect of directional inertias added to pelvis and ankle on gait

Jos H Meuleman, Edwin HF van Asseldonk, Herman van der Kooij Journal of NeuroEngineering and Rehabilitation 2013, 10:40 (19 April 2013)

Abstract | Full text | PDF | PubMed

11.

Research   Open Access

Electron beam fabrication of a microfluidic device for studying submicron-scale bacteria

M Moolman, Zhuangxiong Huang, Sriram Krishnan, Jacob WJ Kerssemakers, Nynke H Dekker Journal of Nanobiotechnology 2013, 11:12 (10 April 2013)

Abstract | Full text | PDF | PubMed

12.

Research   Open Access

Genome-scale analyses of butanol tolerance in Saccharomyces cerevisiae reveal an essential role of protein degradation

Daniel González-Ramos, Marcel van den Broek, Antonius JA van Maris, Jack T Pronk, Jean-Marc G Daran Biotechnology for Biofuels 2013, 6:48 (3 April 2013)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

13.

Research article   Open Access

Glucose-methanol co-utilization in Pichia pastoris studied by metabolomics and instationary 13C flux analysis

Joel Jordà, Camilo Suarez, Marc Carnicer, Angela ten Pierick, Joseph J Heijnen, Walter van Gulik, Pau Ferrer, Joan Albiol, Aljoscha Wahl BMC Systems Biology 2013, 7:17 (28 February 2013)

Abstract | Full text | PDF | PubMed

14.

Methodology   Open Access

Identification of the contribution of the ankle and hip joints to multi-segmental balance control

Tjitske Anke Boonstra, Alfred C Schouten, Herman van der Kooij Journal of NeuroEngineering and Rehabilitation 2013, 10:23 (22 February 2013)

Abstract | Full text | PDF | PubMed

15.

Original research   Open Access

Effects of attenuation map accuracy on attenuation-corrected micro-SPECT images

Chao Wu, Hugo A Gratama van Andel, Peter Laverman, Otto C Boerman, Freek J Beekman EJNMMI Research 2013, 3:7 (31 January 2013)

Abstract | Full text | PDF | PubMed

16.

Methodology article   Open Access Highly Accessed

Detecting recurrent gene mutation in interaction network context using multi-scale graph diffusion

Sepideh Babaei, Marc Hulsman, Marcel Reinders, Jeroen de Ridder BMC Bioinformatics 2013, 14:29 (23 January 2013)

Abstract | Full text | PDF | PubMed

17.

Research   Open Access

Selective control of gait subtasks in robotic gait training: foot clearance support in stroke survivors with a powered exoskeleton

Bram Koopman, Edwin HF van Asseldonk, Herman van der Kooij Journal of NeuroEngineering and Rehabilitation 2013, 10:3 (21 January 2013)

Abstract | Full text | PDF | PubMed

18.

Research   Open Access Highly Accessed

De novo production of the flavonoid naringenin in engineered Saccharomyces cerevisiae

Frank Koopman, Jules Beekwilder, Barbara Crimi, Adele van Houwelingen, Robert D Hall, Dirk Bosch, Antonius JA van Maris, Jack T Pronk, Jean-Marc Daran Microbial Cell Factories 2012, 11:155 (8 December 2012)

Abstract | Full text | PDF | PubMed

19.

Research article   Open Access

Similar temperature dependencies of glycolytic enzymes: an evolutionary adaptation to temperature dynamics?

Ana Luisa B Cruz, Marit Hebly, Giang-Huong Duong, Sebastian A Wahl, Jack T Pronk, Joseph J Heijnen, Pascale Daran-Lapujade, Walter M van Gulik BMC Systems Biology 2012, 6:151 (7 December 2012)

Abstract | Full text | PDF | PubMed

20.

Research   Open Access

Substrate cycles in Penicillium chrysogenum quantified by isotopic non-stationary flux analysis

Zheng Zhao, Angela ten Pierick, Lodewijk de Jonge, Joseph J Heijnen, S Aljoscha Wahl Microbial Cell Factories 2012, 11:140 (25 October 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

21.

Research   Open Access

Counteracting ring formation in rotary kilns

M Pisaroni, R Sadi, D Lahaye Journal of Mathematics in Industry 2012, 2:3 (24 October 2012)

Abstract | Full text | PDF

22.

Research   Open Access

An activity theory analysis of boundary objects in cross-border information systems development for disaster management

Nitesh Bharosa, JinKyu Lee, Marijn Janssen, H Raghav Rao Security Informatics 2012, 1:15 (17 October 2012)

Abstract | Full text | PDF

23.

Research   Open Access Highly Accessed

An internal deletion in MTH1 enables growth on glucose of pyruvate-decarboxylase negative, non-fermentative Saccharomyces cerevisiae

Bart Oud, Carmen-Lisset Flores, Carlos Gancedo, Xiuying Zhang, Joshua Trueheart, Jean-Marc Daran, Jack T Pronk, Antonius JA van Maris Microbial Cell Factories 2012, 11:131 (15 September 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

24.

Research   Open Access

Iterative equalization for OFDM systems over wideband Multi-Scale Multi-Lag channels

Tao Xu, Zijian Tang, Rob Remis, Geert Leus EURASIP Journal on Wireless Communications and Networking 2012, 2012:280 (31 August 2012)

Abstract | Full text | PDF

25.

Research article   Open Access

Reproducibility of a 3-dimensional gyroscope in measuring shoulder anteflexion and abduction

Ludo I F Penning, Nick A Guldemond, Rob A de Bie, GeertHIM Walenkamp BMC Musculoskeletal Disorders 2012, 13:135 (30 July 2012)

Abstract | Full text | PDF | PubMed

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