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Supporter Member - Colorado State University

Founded in 1870, Colorado State University is a land-grant institution and one of America's leading research universities, with world-class research in infectious disease, atmospheric science, clean energy technologies, and environmental science.

http://www.colostate.edu/

Research staff and students at Colorado State University:

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Work published with BioMed Central, Chemistry Central and SpringerOpen by researchers at Colorado State University

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	1.	Review The impact of cow's milk-mediated mTORC1-signaling in the initiation and progression of prostate cancer Bodo C Melnik, Swen John, Pedro Carrera-Bastos, Loren Cordain Nutrition & Metabolism 2012, 9:74 (14 August 2012) Abstract \| Full text \| PDF \| PubMed
	2.	Method SpliceGrapher: detecting patterns of alternative splicing from RNA-Seq data in the context of gene models and EST data Mark F Rogers, Julie Thomas, Anireddy SN Reddy, Asa Ben-Hur Genome Biology 2012, 13:R4 (31 January 2012) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary A tool that uses a priori information to optimize alternative splicing prediction from RNA-seq data
	3.	Research Adeno-associated virus type 2 infection activates caspase dependent and independent apoptosis in multiple breast cancer lines but not in normal mammary epithelial cells Samina Alam, Brian S Bowser, Michael J Conway, Mohd Israr, Apurva Tandon, Craig Meyers Molecular Cancer 2011, 10:97 (9 August 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	4.	Research Resveratrol suppresses human colon cancer cell proliferation and induces apoptosis via targeting the pentose phosphate and the talin-FAK signaling pathways-A proteomic approach Jairam Vanamala, Sridhar Radhakrishnan, Lavanya Reddivari, Vadiraja B Bhat, Andrey Ptitsyn Proteome Science 2011, 9:49 (17 August 2011) Abstract \| Full text \| PDF \| PubMed
	5.	Research *Genome sequence of the necrotrophic plant pathogen Pythium ultimum* reveals original pathogenicity mechanisms and effector repertoire** C André Lévesque, Henk Brouwer, Liliana Cano, John P Hamilton, Carson Holt, Edgar Huitema, Sylvain Raffaele, Gregg P Robideau, Marco Thines, Joe Win, Marcelo M Zerillo, Gordon W Beakes, Jeffrey L Boore, Dana Busam, Bernard Dumas, Steve Ferriera, Susan I Fuerstenberg, Claire MM Gachon, Elodie Gaulin, Francine Govers, Laura Grenville-Briggs, Neil Horner, Jessica Hostetler, Rays HY Jiang, Justin Johnson, Theerapong Krajaejun, Haining Lin, Harold JG Meijer, Barry Moore, Paul Morris et al. Genome Biology 2010, 11:R73 (13 July 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary The genome sequence of the plant pathogenic oomycete, Pythium ultimum and a comparison with the related potato blight pathogen genome reveals differences in pathogenicity.
	6.	Research article Effects of eight weeks of an alleged aromatase inhibiting nutritional supplement 6-OXO (androst-4-ene-3,6,17-trione) on serum hormone profiles and clinical safety markers in resistance-trained, eugonadal males Dan Rohle, Colin Wilborn, Lem Taylor, Chris Mulligan, Richard Kreider, Darryn Willoughby Journal of the International Society of Sports Nutrition 2007, 4:13 (19 October 2007) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	7.	Research article Effects of P-MAPA Immunomodulator on Toll-Like Receptors and p53: Potential Therapeutic Strategies for Infectious Diseases and Cancer Wagner J Fávaro, Odilon S Nunes, Fabio RF Seiva, Iseu S Nunes, Lisa K Woolhiser, Nelson Durán, Anne J Lenaerts Infectious Agents and Cancer 2012, 7:14 (18 June 2012) Abstract \| Full text \| PDF \| PubMed
	8.	Research Collection of Epithelial Cells from Rodent Mammary Gland Via Laser Capture Microdissection Yielding High-Quality RNA Suitable for Microarray Analysis John N McGinley, Zongjian Zhu, Weiqin Jiang, Henry J Thompson Biological Procedures Online 2010, 12:31-43 (3 March 2010) Abstract \| Full text \| PDF
	9.	Research article Plant neighbor identity influences plant biochemistry and physiology related to defense Amanda K Broz, Corey D Broeckling, Clelia De-la-Peña, Matthew R Lewis, Erick Greene, Ragan M Callaway, Lloyd W Sumner, Jorge M Vivanco BMC Plant Biology 2010, 10:115 (17 June 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	10.	Research article Resveratrol suppresses IGF-1 induced human colon cancer cell proliferation and elevates apoptosis via suppression of IGF-1R/Wnt and activation of p53 signaling pathways Jairam Vanamala, Lavanya Reddivari, Sridhar Radhakrishnan, Chris Tarver BMC Cancer 2010, 10:238 (26 May 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	11.	Research Selective targeting of microglia by quantum dots S Sakura Minami, Binggui Sun, Ketul Popat, Tiina Kauppinen, Mike Pleiss, Yungui Zhou, Michael E Ward, Paul Floreancig, Lennart Mucke, Tejal Desai, Li Gan Journal of Neuroinflammation 2012, 9:22 (24 January 2012) Abstract \| Full text \| PDF \| PubMed
	12.	Methodology article *An improved method for rapid generation of unmarked Pseudomonas aeruginosa* deletion mutants** Kyoung-Hee Choi, Herbert P Schweizer BMC Microbiology 2005, 5:30 (23 May 2005) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	13.	Research A sample design for globally consistent biomass estimation using lidar data from the Geoscience Laser Altimeter System (GLAS) Sean P Healey, Paul L Patterson, Sassan Saatchi, Michael A Lefsky, Andrew J Lister, Elizabeth A Freeman Carbon Balance and Management 2012, 7:10 (31 October 2012) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary Using this new model design, global forest biomass could be estimated using lidar height measurements recorded on board the Ice Cloud and Elevation Satellite mission (ICESat). Measuring and monitoring forest biomass of global importance as it is a large store of carbon and may mitigate for global climate change.
	14.	Research On the neural networks of empathy: A principal component analysis of an fMRI study Jason S Nomi, Dag Scherfeld, Skara Friederichs, Ralf Schäfer, Matthias Franz, Hans-Jörg Wittsack, Nina P Azari, John Missimer, Rüdiger J Seitz Behavioral and Brain Functions 2008, 4:41 (17 September 2008) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	15.	Research article *Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae* pv. oryzae PXO99^A** Steven L Salzberg, Daniel D Sommer, Michael C Schatz, Adam M Phillippy, Pablo D Rabinowicz, Seiji Tsuge, Ayako Furutani, Hirokazu Ochiai, Arthur L Delcher, David Kelley, Ramana Madupu, Daniela Puiu, Diana Radune, Martin Shumway, Cole Trapnell, Gudlur Aparna, Gopaljee Jha, Alok Pandey, Prabhu B Patil, Hiromichi Ishihara, Damien F Meyer, Boris Szurek, Valerie Verdier, Ralf Koebnik, J Maxwell Dow, Robert P Ryan, Hisae Hirata, Shinji Tsuyumu, Sang Won Lee, Pamela C Ronald, Ramesh V Sonti, Marie-Anne Van Sluys, Jan E Leach, Frank F White, Adam J Bogdanove et al. BMC Genomics 2008, 9:204 (1 May 2008) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	16.	Methodology A Method for Serial Tissue Processing and Parallel Analysis of Aberrant Crypt Morphology, Mucin Depletion, and Beta-Catenin Staining in an Experimental Model of Colon Carcinogenesis John N McGinley, Matthew D Thompson, Henry J Thompson Biological Procedures Online 2010, 12:118-130 (18 May 2010) Abstract \| Full text \| PDF
	17.	Case study Ivermectin to reduce malaria transmission: a research agenda for a promising new tool for elimination Carlos J Chaccour, Kevin C Kobylinski, Quique Bassat, Teun Bousema, Chris Drakeley, Pedro Alonso, Brian D Foy Malaria Journal 2013, 12:153 (7 May 2013) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary A topic of high importance to the vector control community and reflects recent discussions on the current challenges in malaria prevention and control ¿ specifically, development of new tools for niche transmission settings (i.e., outdoors) where current interventions, such as ITNs and IRS may not be effective.
	18.	Research article Effect of dietary patterns differing in carbohydrate and fat content on blood lipid and glucose profiles based on weight-loss success of breast-cancer survivors Henry J Thompson, Scot M Sedlacek, Devchand Paul, Pamela Wolfe, John N McGinley, Mary C Playdon, Elizabeth A Daeninck, Sara N Bartels, Mark R Wisthoff Breast Cancer Research 2012, 14:R1 (6 January 2012) Abstract \| Full text \| PDF \| PubMed
	19.	Research article Amyloid beta dimers/trimers potently induce cofilin-actin rods that are inhibited by maintaining cofilin-phosphorylation Richard C Davis, Ian T Marsden, Michael T Maloney, Laurie S Minamide, Marcia Podlisny, Dennis J Selkoe, James R Bamburg Molecular Neurodegeneration 2011, 6:10 (24 January 2011) Abstract \| Full text \| PDF \| PubMed
	20.	Research article *A nematode demographics assay in transgenic roots reveals no significant impacts of the Rhg1* locus LRR-Kinase on soybean cyst nematode resistance** Sara Melito, Adam L Heuberger, David Cook, Brian W Diers, Ann E MacGuidwin, Andrew F Bent BMC Plant Biology 2010, 10:104 (9 June 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| 1 comment
	21.	Minireview *The genome of Mycobacterium leprae: a minimal mycobacterial gene set* Varalakshmi D Vissa, Patrick J Brennan Genome Biology 2001, 2:reviews1023-reviews1023.8 (3 August 2001) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary Comparison of the recently sequenced genome of the leprosy-causing pathogen Mycobacterium leprae with other mycobacterial genomes reveals a drastic gene reduction and decay in M. leprae affecting many metabolic areas, exemplified by the retention of a minimal set of genes required for cell-wall biosynthesis.
	22.	Research HIV-1 resistance conferred by siRNA cosuppression of CXCR4 and CCR5 coreceptors by a bispecific lentiviral vector Joseph Anderson, Ramesh Akkina AIDS Research and Therapy 2005, 2:1 (13 January 2005) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	23.	Research article *Dengue virus type 2: replication and tropisms in orally infected Aedes aegypti* mosquitoes** Ma Isabel Salazar, Jason H Richardson, Irma Sánchez-Vargas, Ken E Olson, Barry J Beaty BMC Microbiology 2007, 7:9 (30 January 2007) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	24.	Review Africa and the global carbon cycle Christopher A Williams, Niall P Hanan, Jason C Neff, Robert J Scholes, Joseph A Berry, A Scott Denning, David F Baker Carbon Balance and Management 2007, 2:3 (7 March 2007) Abstract \| Full text \| PDF \| PubMed
	25.	Research article RNA-seq analyses of blood-induced changes in gene expression in the mosquito vector species, Aedes aegypti Mariangela Bonizzoni, W Dunn, Corey L Campbell, Ken E Olson, Michelle T Dimon, Osvaldo Marinotti, Anthony A James BMC Genomics 2011, 12:82 (28 January 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central