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1.

Research   Open Access

Automated determination of peripheral nerve stimulation parameters to achieve desired effector response -- a procedural routine, preliminary studies and proposal of improvements

Pawe¿ Maciejasz, Wies¿aw Marcol, Roman Pa¿niczek, Joanna Lewin-Kowalik, Klaus-Peter Hoffmann BioMedical Engineering OnLine 2013, 12:11 (7 February 2013)

Abstract | Provisional PDF | PubMed

2.

Research article   Open Access

Genomic analysis of the regulatory elements and links with intrinsic DNA structural properties in the shrunken genome of Buchnera

Lilia Brinza, Federica Calevro, Hubert Charles BMC Genomics 2013, 14:73 (1 February 2013)

Abstract | Full text | PDF | PubMed

3.

Proceedings   Open Access

Linearization of ancestral multichromosomal genomes

Ján Maňuch, Murray Patterson, Roland Wittler, Cedric Chauve, Eric Tannier BMC Bioinformatics 2012, 13(Suppl 19):S11 (19 December 2012)

Abstract | Full text | PDF | PubMed

4.

Proceedings   Open Access

Compareads: comparing huge metagenomic experiments

Nicolas Maillet, Claire Lemaitre, Rayan Chikhi, Dominique Lavenier, Pierre Peterlongo BMC Bioinformatics 2012, 13(Suppl 19):S10 (19 December 2012)

Abstract | Full text | PDF | PubMed

5.

Research   Open Access

Analysis of composition-based metagenomic classification

Susan Higashi, André Barreto, Maurício Cantão, Ana de Vasconcelos BMC Genomics 2012, 13(Suppl 5):S1 (19 October 2012)

Abstract | Full text | PDF | PubMed

6.

Research article   Open Access

Exploration of the core metabolism of symbiotic bacteria

Cecilia Coimbra Klein, Ludovic Cottret, Janice Kielbassa, Hubert Charles, Christian Gautier, Ana Tereza Ribeiro de Vasconcelos, Vincent Lacroix, Marie-France Sagot BMC Genomics 2012, 13:438 (31 August 2012)

Abstract | Full text | PDF | PubMed

7.

Editorial   Open Access

Combining Cloud and sensors in a smart city environment

Nathalie Mitton, Symeon Papavassiliou, Antonio Puliafito, Kishor S Trivedi EURASIP Journal on Wireless Communications and Networking 2012, 2012:247 (8 August 2012)

Abstract | Full text | PDF

8.

Poster presentation   Open Access

General anaesthetics induce tonic inhibition and modulate the gain of neural populations : a modeling study

Axel Hutt, Thomas Voegtlin BMC Neuroscience 2012, 13(Suppl 1):P16 (16 July 2012)

Full text | PDF

9.

Editorial   Open Access Highly Accessed

Editorial: Special issue on Internet of Things: convergence of sensing, networking, and web technologies

Antonio Puliafito, Nathalie Mitton, Symeon Papavassiliou, Kishor S Trivedi EURASIP Journal on Wireless Communications and Networking 2012, 2012:212 (9 July 2012)

Abstract | Full text | PDF

10.

Research   Open Access

Sampling solution traces for the problem of sorting permutations by signed reversals

Christian Baudet, Zanoni Dias, Marie-France Sagot Algorithms for Molecular Biology 2012, 7:18 (15 June 2012)

Abstract | Full text | PDF | PubMed

11.

Research   Open Access

Mean-field description and propagation of chaos in networks of Hodgkin-Huxley and FitzHugh-Nagumo neurons

Javier Baladron, Diego Fasoli, Olivier Faugeras, Jonathan Touboul The Journal of Mathematical Neuroscience 2012, 2:10 (31 May 2012)

Abstract | Full text | PDF | PubMed

12.

Research   Open Access

Invariants and Other Structural Properties of Biochemical Models as a Constraint Satisfaction Problem

Sylvain Soliman Algorithms for Molecular Biology 2012, 7:15 (29 May 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

13.

Research article   Open Access Highly Accessed

A neutral theory of genome evolution and the frequency distribution of genes

Bart Haegeman, Joshua S Weitz BMC Genomics 2012, 13:196 (21 May 2012)

Abstract | Full text | PDF | PubMed

14.

Research article   Open Access Highly Accessed

A genome-scale metabolic model of the lipid-accumulating yeast Yarrowia lipolytica

Nicolas Loira, Thierry Dulermo, Jean-Marc Nicaud, David Sherman BMC Systems Biology 2012, 6:35 (4 May 2012)

Abstract | Full text | PDF | PubMed

15.

Proceedings   Open Access

KISSPLICE: de-novo calling alternative splicing events from RNA-seq data

Gustavo AT Sacomoto, Janice Kielbassa, Rayan Chikhi, Raluca Uricaru, Pavlos Antoniou, Marie-France Sagot, Pierre Peterlongo, Vincent Lacroix BMC Bioinformatics 2012, 13(Suppl 6):S5 (19 April 2012)

Abstract | Full text | PDF | PubMed

16.

Research article   Open Access Highly Accessed

Mapsembler, targeted and micro assembly of large NGS datasets on a desktop computer

Pierre Peterlongo, Rayan Chikhi BMC Bioinformatics 2012, 13:48 (23 March 2012)

Abstract | Full text | PDF | PubMed | 1 comment |  Editor’s summary

Mapsembler, a sequence assembly tool for desktop computers, uses NGS reads from newly sequenced, non-assembled genomes or transcriptomes to provide targeted assemblies and has retrieved known gene fusions in human cancer and discovered new ones

17.

Research   Open Access

Design and field evaluation of geographical location-aware service discovery on IPv6 GeoNetworking for VANET

Satoru Noguchi, Manabu Tsukada, Thierry Ernst, Astuo Inomata, Kazutoshi Fujikawa EURASIP Journal on Wireless Communications and Networking 2012, 2012:29 (1 February 2012)

Abstract | Full text | PDF

18.

Research   Open Access

Universal and efficient compressed sensing by spread spectrum and application to realistic Fourier imaging techniques

Gilles Puy, Pierre Vandergheynst, Rémi Gribonval, Yves Wiaux EURASIP Journal on Advances in Signal Processing 2012, 2012:6 (12 January 2012)

Abstract | Full text | PDF

19.

Research   Open Access

Real-time reliability measure-driven multi-hypothesis tracking using 2D and 3D features

Marcos D Zúñiga, François Brémond, Monique Thonnat EURASIP Journal on Advances in Signal Processing 2011, 2011:142 (30 December 2011)

Abstract | Full text | PDF

20.

Methodology article   Open Access

Communicating oscillatory networks: frequency domain analysis

Adaoha EC Ihekwaba, Sean Sedwards BMC Systems Biology 2011, 5:203 (22 December 2011)

Abstract | Full text | PDF | PubMed

21.

Research article   Open Access

A novel substitution matrix fitted to the compositional bias in Mollicutes improves the prediction of homologous relationships

Claire Lemaitre, Aurélien Barré, Christine Citti, Florence Tardy, François Thiaucourt, Pascal Sirand-Pugnet, Patricia Thébault BMC Bioinformatics 2011, 12:457 (24 November 2011)

Abstract | Full text | PDF | PubMed

22.

Research article   Open Access

The logic layout of the TOL network of Pseudomonas putida pWW0 plasmid stems from a metabolic amplifier motif (MAM) that optimizes biodegradation of m-xylene

Rafael Silva-Rocha, Hidde de Jong, Javier Tamames, Víctor de Lorenzo BMC Systems Biology 2011, 5:191 (11 November 2011)

Abstract | Full text | PDF | PubMed

23.

Proceedings   Open Access

Genome dedoubling by DCJ and reversal

Antoine Thomas, Jean-Stéphane Varré, Aïda Ouangraoua BMC Bioinformatics 2011, 12(Suppl 9):S20 (5 October 2011)

Abstract | Full text | PDF | PubMed

24.

Research   Open Access

A study of artificial speech quality assessors of VoIP calls subject to limited bursty packet losses

Sofiene Jelassi, Gerardo Rubino EURASIP Journal on Image and Video Processing 2011, 2011:9 (23 September 2011)

Abstract | Full text | PDF

25.

Research   Open Access

Statistics of spike trains in conductance-based neural networks: Rigorous results

Bruno Cessac The Journal of Mathematical Neuroscience 2011, 1:8 (25 August 2011)

Abstract | Full text | PDF

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