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1.

Research article   Open Access

Evidence for extensive heterotrophic metabolism, antioxidant action, and associated regulatory events during winter hardening in Sitka spruce

Eva Collakova, Curtis Klumas, Haktan Suren, Elijah Myers, Lenwood S Heath, Jason A Holliday, Ruth Grene BMC Plant Biology 2013, 13:72 (30 April 2013)

Abstract | Full text | PDF | PubMed

2.

Research article   Open Access

Six novel Y chromosome genes in Anopheles mosquitoes discovered by independently sequencing males and females

Andrew Brantley Hall, Yumin Qi, Vladimir Timoshevskiy, Maria V Sharakhova, Igor V Sharakhov, Zhijian Tu BMC Genomics 2013, 14:273 (23 April 2013)

Abstract | Full text | PDF | PubMed

3.

Review   Open Access Highly Accessed

Distribution of tick-borne diseases in China

Xian-Bo Wu, Ren-Hua Na, Shan-Shan Wei, Jin-Song Zhu, Hong-Juan Peng Parasites & Vectors 2013, 6:119 (23 April 2013)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Tick-borne diseases have attracted increasing attention in China recently because of their growing incidence and consequent significant harm to humans. This article reviews the distribution and epidemic characteristics of the tick-borne diseases which are commonly observed and newly emerged in China. Image: Ixodes persuleatus.

4.

Research highlight   Subscription Highly Accessed

The fractured genome of HeLa cells

David Mittelman, John H Wilson Genome Biology 2013, 14:111 (17 April 2013)

Abstract | Full text | PDF | PubMed |  Editor’s summary

David Mittelman and John Wilson steer clear of the controversy, and offer a scientific perspective on the HeLa cell genome

5.

Research article   Open Access Highly Accessed

Evolution of a horizontally acquired legume gene, albumin 1, in the parasitic plant Phelipanche aegyptiaca and related species

Yeting Zhang, Monica Fernandez-Aparicio, Eric K Wafula, Malay Das, Yuannian Jiao, Norman J Wickett, Loren A Honaas, Paula E Ralph, Martin F Wojciechowski, Michael P Timko, John I Yoder, James H Westwood, Claude W dePamphilis BMC Evolutionary Biology 2013, 13:48 (20 February 2013)

Abstract | Full text | PDF | PubMed

6.

Nano Express   Open Access Highly Accessed

In situ accurate control of 2D-3D transition parameters for growth of low-density InAs/GaAs self-assembled quantum dots

Mi-Feng Li, Ying Yu, Ji-Fang He, Li-Juan Wang, Yan Zhu, Xiang-jun Shang, Hai-Qiao Ni, Zhi-Chuan Niu Nanoscale Research Letters 2013, 8:86 (18 February 2013)

Abstract | Full text | PDF | PubMed

7.

Research   Open Access

An attenuated Lassa vaccine in SIV-infected rhesus macaques does not persist or cause arenavirus disease but does elicit Lassa virus-specific immunity

Juan C Zapata, Bhawna Poonia, Joseph Bryant, Harry Davis, Eugene Ateh, Lanea George, Oswald Crasta, Yan Zhang, Tom Slezak, Crystal Jaing, C Pauza, Marco Goicochea, Dmitry Moshkoff, Igor S Lukashevich, Maria S Salvato Virology Journal 2013, 10:52 (12 February 2013)

Abstract | Full text | PDF | PubMed

8.

Technical advance   Open Access

In silico surveillance: evaluating outbreak detection with simulation models

Bryan Lewis, Stephen Eubank, Allyson M Abrams, Ken Kleinman BMC Medical Informatics and Decision Making 2013, 13:12 (23 January 2013)

Abstract | Provisional PDF | PubMed

9.

Research article   Open Access Highly Accessed

Effects of the probiotic Lactobacillus animalis in murine Mycobacterium avium subspecies paratuberculosis infection

Enusha Karunasena, Paresh C Kurkure, Russell D Lackey, Kevin Wyatt McMahon, Estevan P Kiernan, Suzanne Graham, Magdy S Alabady, David L Campos, Owatha L Tatum, Mindy M Brashears BMC Microbiology 2013, 13:8 (16 January 2013)

Abstract | Full text | PDF | PubMed

10.

Research article   Open Access

Functional genomics of a generalist parasitic plant: Laser microdissection of host-parasite interface reveals host-specific patterns of parasite gene expression

Loren A Honaas, Eric K Wafula, Zhenzhen Yang, Joshua P Der, Norman J Wickett, Naomi S Altman, Christopher G Taylor, John I Yoder, Michael P Timko, James H Westwood, Claude W dePamphilis BMC Plant Biology 2013, 13:9 (9 January 2013)

Abstract | Full text | PDF | PubMed

11.

Meeting report   Subscription

Personal genomes and precision medicine

Gareth Highnam, David Mittelman Genome Biology 2012, 13:324 (19 December 2012)

Abstract | Full text | PDF | PubMed |  Editor’s summary

A report of the fifth annual Personal Genomes and Medical Genomics meeting, held at Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, USA, November 14-17, 2012

12.

Research   Open Access

Species-level classification of the vaginal microbiome

Jennifer M Fettweis, Myrna G Serrano, Nihar U Sheth, Carly M Mayer, Abigail L Glascock, J Paul Brooks, Kimberly K Jefferson, Gregory A Buck BMC Genomics 2012, 13(Suppl 8):S17 (17 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

13.

Research   Open Access

A strategy to study pathway cross-talks of cells under repetitive exposure to stimuli

Yan Fu, Xiaoshan Jiang, Hang Zhang, Jianhua Xing BMC Systems Biology 2012, 6(Suppl 3):S6 (17 December 2012)

Abstract | Full text | PDF | PubMed

14.

Research article   Open Access Highly Accessed

Targeted enrichment of the black cottonwood (Populus trichocarpa) gene space using sequence capture

Lecong Zhou, Jason A Holliday BMC Genomics 2012, 13:703 (14 December 2012)

Abstract | Full text | PDF | PubMed

15.

Review   Open Access

Dietary biomarkers: advances, limitations and future directions

Valisa E Hedrick, Andrea M Dietrich, Paul A Estabrooks, Jyoti Savla, Elena Serrano, Brenda M Davy Nutrition Journal 2012, 11:109 (14 December 2012)

Abstract | Full text | PDF | PubMed

16.

Review   Open Access

Experimental determination of the oral bioavailability and bioaccessibility of lead particles

Elise Deshommes, Robert Tardif, Marc Edwards, Sébastien Sauvé, Michèle Prévost Chemistry Central Journal 2012, 6:138 (22 November 2012)

Abstract | Full text | PDF | PubMed |  Editor’s summary

This review summarizes the information available on the bioavailability and bioaccessibility testing for Pb particles. The strengths and weaknesses of the procedures are explained and gaps in the current data available are identified

17.

Research article   Open Access

Several steps/day indicators predict changes in anthropometric outcomes: HUB City Steps

Jessica L Thomson, Alicia S Landry, Jamie M Zoellner, Catrine Tudor-Locke, Michael Webster, Carol Connell, Kathy Yadrick BMC Public Health 2012, 12:983 (15 November 2012)

Abstract | Full text | PDF | PubMed

18.

Research article   Open Access Highly Accessed

Comparative genomic analysis and phylogenetic position of Theileria equi

Lowell S Kappmeyer, Mathangi Thiagarajan, David R Herndon, Joshua D Ramsay, Elisabet Caler, Appolinaire Djikeng, Joseph J Gillespie, Audrey OT Lau, Eric H Roalson, Joana C Silva, Marta G Silva, Carlos E Suarez, Massaro W Ueti, Vishvanath M Nene, Robert H Mealey, Donald P Knowles, Kelly A Brayton BMC Genomics 2012, 13:603 (9 November 2012)

Abstract | Full text | PDF | PubMed

19.

Research   Open Access

Does availability of physical activity and food outlets differ by race and income? Findings from an enumeration study in a health disparate region

Jennie L Hill, Clarice Chau, Candice R Luebbering, Korine K Kolivras, Jamie Zoellner International Journal of Behavioral Nutrition and Physical Activity 2012, 9:105 (6 September 2012)

Abstract | Full text | PDF | PubMed

20.

Short Report   Open Access

Analysis of T-DNA alleles of flavonoid biosynthesis genes in Arabidopsis ecotype Columbia

Peter A Bowerman, Melissa V Ramirez, Michelle B Price, Richard F Helm, Brenda SJ Winkel BMC Research Notes 2012, 5:485 (4 September 2012)

Abstract | Full text | PDF | PubMed

21.

Research article   Open Access

Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs

Hong Zhu, Rui Xia, Bingyu Zhao, Yong-qiang An, Chris D Dardick, Ann M Callahan, Zongrang Liu BMC Plant Biology 2012, 12:149 (21 August 2012)

Abstract | Full text | PDF | PubMed

22.

Review   Open Access Highly Accessed

Transient defects of mitotic spindle geometry and chromosome segregation errors

William T Silkworth, Daniela Cimini Cell Division 2012, 7:19 (11 August 2012)

Abstract | Full text | PDF | PubMed

23.

Research article   Open Access Highly Accessed

Translational regulation of Anopheles gambiae mRNAs in the midgut during Plasmodium falciparum infection

Edward A Mead, Meng Li, Zhijian Tu, Jinsong Zhu BMC Genomics 2012, 13:366 (2 August 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

24.

Methodology article   Open Access Highly Accessed

Genome-wide identification of significant aberrations in cancer genome

Xiguo Yuan, Guoqiang Yu, Xuchu Hou, Ie-Ming Shih, Robert Clarke, Junying Zhang, Eric P Hoffman, Roger R Wang, Zhen Zhang, Yue Wang BMC Genomics 2012, 13:342 (27 July 2012)

Abstract | Full text | PDF | PubMed

25.

Software   Open Access Highly Accessed

Condor-COPASI: high-throughput computing for biochemical networks

Edward Kent, Stefan Hoops, Pedro Mendes BMC Systems Biology 2012, 6:91 (26 July 2012)

Abstract | Full text | PDF | PubMed

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