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Work published with BioMed Central, Chemistry Central and SpringerOpen by researchers at George Mason University

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	1.	Short report Inhibition of HIV replication in vitro by clinical immunosuppressants and chemotherapeutic agents Todd Hawley, Mark Spear, Jia Guo, Yuntao Wu Cell & Bioscience 2013, 3:22 (14 May 2013) Abstract \| Provisional PDF \| PubMed
	2.	Research article Daily temperature fluctuations unpredictably influence developmental rate and morphology at a critical early larval stage in a frog Juliana M Arrighi, Ezra S Lencer, Advait Jukar, Daesik Park, Patrick C Phillips, Robert H Kaplan BMC Ecology 2013, 13:18 (4 May 2013) Abstract \| Full text \| PDF \| PubMed
	3.	Research Cigarette smoke extract induces differential expression levels of beta-defensin peptides in human alveolar epithelial cells Tony Pierson, Sarah Learmonth-Pierson, Daniel Pinto, Monique L van Hoek Tobacco Induced Diseases 2013, 11:10 (29 April 2013) Abstract \| Full text \| PDF \| PubMed
	4.	Research The socio-cultural importance of Mauritia flexuosa palm swamps (aguajales) and implications for multi-use management in two Maijuna communities of the Peruvian Amazon Michael P Gilmore, Bryan A Endress, Christa M Horn Journal of Ethnobiology and Ethnomedicine 2013, 9:29 (22 April 2013) Abstract \| Provisional PDF \| PubMed
	5.	Software Using an ensemble of statistical metrics to quantify large sets of plant transcription factor binding sites Parsa Hosseini, Ivan Ovcharenko, Benjamin F Matthews Plant Methods 2013, 9:12 (11 April 2013) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary This article describes a software tool that can identify transcription factor binding sites from amongst large collections of promoter sequences by integrating a number of different approaches. The method is able to identify more over-represented binding site sequences than other common approaches.
	6.	Technical Note CoreGenes3.5: a webserver for the determination of core genes from sets of viral and small bacterial genomes Dann Turner, Darren Reynolds, Donald Seto, Padmanabhan Mahadevan BMC Research Notes 2013, 6:140 (8 April 2013) Abstract \| Full text \| PDF \| PubMed
	7.	Research article Cross-cultural adaptation and validation of the Physical Therapy Outpatient Satisfaction Survey in an Italian musculoskeletal population Carla Vanti, Francesca Bonetti, Daniele Ceron, Raffaella Piccarreta, Francesco Saverio Violante, Andrew Guccione, Paolo Pillastrini BMC Musculoskeletal Disorders 2013, 14:125 (5 April 2013) Abstract \| Full text \| PDF \| PubMed
	8.	Commentary Retrovirus infected cells contain viral microRNAs Zachary A Klase, Gavin C Sampey, Fatah Kashanchi Retrovirology 2013, 10:15 (7 February 2013) Abstract \| Full text \| PDF \| PubMed
	9.	Research CDK2 Regulates HIV-1 Transcription by Phosphorylation of CDK9 on Serine 90 Denitra Breuer, Alexander Kotelkin, Tatiana Ammosova, Namita Kumari, Andrey Ivanov, Andrey V Ilatovskiy, Monique Beullens, Philip R Roane, Mathieu Bollen, Michael G Petukhov, Fatah Kashanchi, Sergei Nekhai Retrovirology 2012, 9:94 (9 November 2012) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary CDK2 phosphorylates CDK9 on Ser 90 to regulate HIV-1 transcription. The phosphorylation of Ser90 by CDK2 represents a novel mechanism of HIV-1 regulated transcription and provides a new strategy for activation of latent HIV-1 provirus.
	10.	Original article Industrial decline and labor reallocation in a transforming economy: Romania in early transition John S Earle IZA Journal of Labor & Development 2012, 1:2 (6 November 2012) Abstract \| Full text \| PDF
	11.	Research A validation of ground ambulance pre-hospital times modeled using geographic information systems Alka B Patel, Nigel M Waters, Ian E Blanchard, Christopher J Doig, William A Ghali International Journal of Health Geographics 2012, 11:42 (3 October 2012) Abstract \| Full text \| PDF \| PubMed
	12.	Poster presentation Cessation of seizure-like oscillations by periodic stimulation in a neuron model with dynamic ion concentrations Jeremy Owen, John R Cressman, Ernest Barreto BMC Neuroscience 2012, 13(Suppl 1):P182 (16 July 2012) Full text \| PDF
	13.	Poster presentation Inverse stochastic resonance induced by ion channel noise Muhammet Uzuntarla, John R Cressman, Mahmut Ozer, Ernest Barreto BMC Neuroscience 2012, 13(Suppl 1):P181 (16 July 2012) Full text \| PDF
	14.	Oral presentation A dynamical study of pulse-coupled oscillators in the brain Tanushree Luke, Ernest Barreto, Paul So BMC Neuroscience 2012, 13(Suppl 1):O12 (16 July 2012) Full text \| PDF
	15.	Proceedings Evolutionary-inspired probabilistic search for enhancing sampling of local minima in the protein energy surface Brian S Olson, Amarda Shehu Proteome Science 2012, 10(Suppl 1):S5 (21 June 2012) Abstract \| Full text \| PDF \| PubMed
	16.	Review The trinity of the cortical actin in the initiation of HIV-1 infection Mark Spear, Jia Guo, Yuntao Wu Retrovirology 2012, 9:45 (28 May 2012) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary This review examines, in detail, the manifestation of the viral dependence on the actin cytoskeleton, and presents a model of how HIV utilizes actin dynamics to initiate infection.
	17.	Research phishGILLNET—phishing detection methodology using probabilistic latent semantic analysis, AdaBoost, and co-training Venkatesh Ramanathan, Harry Wechsler EURASIP Journal on Information Security 2012, 2012:1 (26 March 2012) Abstract \| Full text \| PDF
	18.	Commentary New and novel intrinsic host repressive factors against HIV-1: PAF1 complex, HERC5 and others Mudit Tyagi, Fatah Kashanchi Retrovirology 2012, 9:19 (9 March 2012) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary A new strategy of screening using siRNA libraries has been employed to score for suppression of host restriction factors, ultimately leading to activation of the virus. This novel approach has now identified specific critical factors that may be part of the intracellular innate response to HIV-1 infection.
	19.	Research The impact of IL28B genotype on the gene expression profile of patients with chronic hepatitis C treated with pegylated interferon alpha and ribavirin Zobair M Younossi, Aybike Birerdinc, Mike Estep, Maria Stepanova, Arian Afendy, Ancha Baranova Journal of Translational Medicine 2012, 10:25 (7 February 2012) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	20.	Proceedings Joint association analysis of bivariate quantitative and qualitative traits Mengdie Yuan, Guoqing Diao BMC Proceedings 2011, 5(Suppl 9):S74 (29 November 2011) Abstract \| Full text \| PDF
	21.	Research Challenges to mapping the health risk of hepatitis A virus infection Khayriyyah Mohd Hanafiah, Kathryn H Jacobsen, Steven T Wiersma International Journal of Health Geographics 2011, 10:57 (18 October 2011) Abstract \| Full text \| PDF \| PubMed
	22.	Case report Methadone adverse reaction presenting with large increase in plasma methadone binding: a case series Wenjie J Lu, Weidong Zhou, Yvonne Kreutz, David A Flockhart Journal of Medical Case Reports 2011, 5:513 (10 October 2011) Abstract \| Full text \| PDF \| PubMed
	23.	Review Non-Invasive markers for hepatic fibrosis Ancha Baranova, Priyanka Lal, Aybike Birerdinc, Zobair M Younossi BMC Gastroenterology 2011, 11:91 (17 August 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	24.	Proceedings Evaluation of short read metagenomic assembly Anveshi Charuvaka, Huzefa Rangwala BMC Genomics 2011, 12(Suppl 2):S8 (27 July 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	25.	Meeting abstract Features of HTLV-1 transcriptional and chromatin remodeling dynamics emerge from ChIP-chip analysis Mohammad Heydarian, Dowser Alani, Irene Guendel, Rachel Van Duyne, Tim McCaffrey, Sidney W Fu, Kylene Kehn-Hall, Fatah Kashanchi Retrovirology 2011, 8(Suppl 1):A181 (6 June 2011) Full text \| PDF