1.
MethylPCA: a toolkit to control for confounders in methylome-wide association studies
Wenan
Chen,
Guimin
Gao,
Srilaxmi
Nerella,
Christina
M
Hultman,
Patrik
KE
Magnusson,
Patrick
F
Sullivan,
Karolina
A
Aberg,
Edwin
JCG
van den Oord
BMC Bioinformatics 2013, 14 :74 (2 March 2013)
Abstract | Provisional PDF
2.
Estimation of CpG coverage in whole methylome next-generation sequencing studies
Edwin
J
van den Oord,
Jozsef
Bukszar,
Gábor
Rudolf,
Srilaxmi
Nerella,
Joseph
L
McClay,
Lin
Y
Xie,
Karolina
A
Aberg
BMC Bioinformatics 2013, 14 :50 (12 February 2013)
Abstract | Provisional PDF
| PubMed
3.
Discovery and validation of cell cycle arrest biomarkers in human acute kidney injury
Kianoush
Kashani,
Ali
Al-Khafaji,
Thomas
Ardiles,
Antonio
Artigas,
Sean
M
Bagshaw,
Max
Bell,
Azra
Bihorac,
Robert
Birkhahn,
Cynthia
M
Cely,
Lakhmir
S
Chawla,
Danielle
L
Davison,
Thorsten
Feldkamp,
Lui
G
Forni,
Michelle
Gong,
Kyle
J
Gunnerson,
Michael
Haase,
James
Hackett,
Patrick
M
Honore,
Eric
AJ
Hoste,
Olivier
Joannes-Boyau,
Michael
Joannidis,
Patrick
Kim,
Jay
L
Koyner,
Daniel
T
Laskowitz,
Matthew
E
Lissauer,
Gernot
Marx,
Peter
A
McCullough,
Scott
Mullaney,
Marlies
Ostermann,
Thomas
Rimmelé,
Nathan
I
Shapiro,
Andrew
D
Shaw,
Jing
Shi,
Amy
M
Sprague,
Jean-Louis
Vincent,
Christophe
Vinsonneau
et al.
Critical Care 2013, 17 :R25 (6 February 2013)
Abstract | Provisional PDF
| PubMed | Cited on BioMed Central | F1000 Biology
|
Editor’s summary
Urine TIMP-2, and IGFBP7, two novel biomarkers for risk stratification of acute kidney injury, have been discovered and validated in more than 1000 critically ill patients.
4.
Hormonal modulation of connective tissue homeostasis and sex differences in risk for osteoarthritis of the knee
Barbara
D
Boyan,
David
A
Hart,
Roger
M
Enoka,
Daniel
P
Nicolella,
Eileen
Resnick,
Karen
J
Berkley,
Kathleen
A
Sluka,
C Kent
Kwoh,
Laura
L
Tosi,
Mary
I
O’Connor,
Richard
D
Coutts,
Wendy
M
Kohrt
Biology of Sex Differences 2013, 4 :3 (4 February 2013)
Abstract | Full text | PDF | PubMed
5.
Quantification of thoracic aorta blood flow by magnetic resonance imaging during supine cycling exercise of increasing intensity
Laura
Ellwein,
John
F
LaDisa,
Stacy
Leibham,
Sheila
Schindler-Ivens,
Margaret
M
Samyn
Journal of Cardiovascular Magnetic Resonance 2013, 15 (Suppl 1):P239 (30 January 2013)
Full text | PDF
6.
Comparison of methods for DE-CMR infarct size quantification - reproducibility among three core labs
Igor
Klem,
Einar
Heiberg,
John
D
Grizzard,
Lowie
M
Van Assche,
Michele
Parker,
Hakan
Arheden,
Raymond
J
Kim
Journal of Cardiovascular Magnetic Resonance 2013, 15 (Suppl 1):P180 (30 January 2013)
Full text | PDF
7.
Mitochondrial quality, dynamics and functional capacity in Parkinson’s disease cybrid cell lines selected for Lewy body expression
Emily
N
Cronin-Furman,
M Kathleen
Borland,
Kristen
E
Bergquist,
James
P
Bennett,
Patricia
A
Trimmer
Molecular Neurodegeneration 2013, 8 :6 (26 January 2013)
Abstract | Full text | PDF | PubMed
8.
2013 WSES guidelines for management of intra-abdominal infections
Massimo
Sartelli,
Pierluigi
Viale,
Fausto
Catena,
Luca
Ansaloni,
Ernest
Moore,
Mark
Malangoni,
Frederick
A
Moore,
George
Velmahos,
Raul
Coimbra,
Rao
Ivatury,
Andrew
Peitzman,
Kaoru
Koike,
Ari
Leppaniemi,
Walter
Biffl,
Clay Cothren
Burlew,
Zsolt
J
Balogh,
Ken
Boffard,
Cino
Bendinelli,
Sanjay
Gupta,
Yoram
Kluger,
Ferdinando
Agresta,
Salomone
Di Saverio,
Imtiaz
Wani,
Alex
Escalona,
Carlos
Ordonez,
Gustavo
P
Fraga,
Gerson Alves Pereira
Junior,
Miklosh
Bala,
Yunfeng
Cui,
Sanjay
Marwah
et al.
World Journal of Emergency Surgery 2013, 8 :3 (8 January 2013)
Abstract | Full text | PDF | PubMed
9.
Long term persistence of clonal malaria parasite Plasmodium falciparum lineages in the Colombian Pacific region
Diego
F
Echeverry,
Shalini
Nair,
Lyda
Osorio,
Sanjay
Menon,
Claribel
Murillo,
Tim
JC
Anderson
BMC Genetics 2013, 14 :2 (7 January 2013)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
Analysis of Plasmodium falciparum parasites from malaria patients in Colombia reveals strong subdivision and long-term persistence of clonal populations, highlighting that these aspects of population structure should be taken into account when designing drug resistance studies.
10.
Changes in subcellular localization reveal interactions between human cytomegalovirus terminase subunits
Jian Ben
Wang,
Yali
Zhu,
Michael
A
McVoy,
Deborah
S
Parris
Virology Journal 2012, 9 :315 (21 December 2012)
Abstract | Full text | PDF | PubMed
11.
An automated method for analysis of microcirculation videos for accurate assessment of tissue perfusion
Sumeyra
U
Demir,
Roya
Hakimzadeh,
Rosalyn Hobson
Hargraves,
Kevin
R
Ward,
Eric
V
Myer,
Kayvan
Najarian
BMC Medical Imaging 2012, 12 :37 (21 December 2012)
Abstract | Full text | PDF | PubMed
12.
Factors associated with patient visits to the emergency department for asthma therapy
Hamdan
AL-Jahdali,
Ahmed
Anwar,
Abdullah
AL-Harbi,
Salim
Baharoon,
Rabih
Halwani,
Abdulllah
Al Shimemeri,
Saleh
Al-Muhsen
BMC Pulmonary Medicine 2012, 12 :80 (17 December 2012)
Abstract | Full text | PDF | PubMed
13.
Species-level classification of the vaginal microbiome
Jennifer
M
Fettweis,
Myrna
G
Serrano,
Nihar
U
Sheth,
Carly
M
Mayer,
Abigail
L
Glascock,
J Paul
Brooks,
Kimberly
K
Jefferson,
Gregory
A
Buck
BMC Genomics 2012, 13 (Suppl 8):S17 (17 December 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
14.
Multi-species data integration and gene ranking enrich significant results in an alcoholism genome-wide association study
Zhongming
Zhao,
An-Yuan
Guo,
Edwin
JCG
van den Oord,
Fazil
Aliev,
Peilin
Jia,
Howard
J
Edenberg,
Brien
P
Riley,
Danielle
M
Dick,
Jill
C
Bettinger,
Andrew
G
Davies,
Michael
S
Grotewiel,
Marc
A
Schuckit,
Arpana
Agrawal,
John
Kramer,
John
I
Nurnberger,
Kenneth
S
Kendler,
Bradley
T
Webb,
Michael
F
Miles
BMC Genomics 2012, 13 (Suppl 8):S16 (17 December 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
15.
Genomic sequence analysis and characterization of Sneathia amnii sp. nov
Michael
D
Harwich,
Myrna
G
Serrano,
Jennifer
M
Fettweis,
João
MP
Alves,
Mark
A
Reimers,
Gregory
A
Buck,
Kimberly
K
Jefferson
BMC Genomics 2012, 13 (Suppl 8):S4 (17 December 2012)
Abstract | Full text | PDF | PubMed
16.
RNA-Seq analysis implicates dysregulation of the immune system in schizophrenia
Junzhe
Xu,
Jingchun
Sun,
Jingchun
Chen,
Lily
Wang,
Anna
Li,
Matthew
Helm,
Steven
L
Dubovsky,
Silviu-Alin
Bacanu,
Zhongming
Zhao,
Xiangning
Chen
BMC Genomics 2012, 13 (Suppl 8):S2 (17 December 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
17.
Innovation in patient-centered care: lessons from a qualitative study of innovative health care organizations in Washington State
Peter
Reed,
Douglas
A
Conrad,
Susan
E
Hernandez,
Carolyn
Watts,
Miriam
Marcus-Smith
BMC Family Practice 2012, 13 :120 (14 December 2012)
Abstract | Full text | PDF | PubMed
18.
Comparison of walking overground and in a Computer Assisted Rehabilitation Environment (CAREN) in individuals with and without transtibial amputation
Deanna
H
Gates,
Benjamin
J
Darter,
Jonathan
B
Dingwell,
Jason
M
Wilken
Journal of NeuroEngineering and Rehabilitation 2012, 9 :81 (14 November 2012)
Abstract | Full text | PDF | PubMed
19.
Rod microglia: elongation, alignment, and coupling to form trains across the somatosensory cortex after experimental diffuse brain injury
Jenna
M
Ziebell,
Samuel
E
Taylor,
Tuoxin
Cao,
Jordan
L
Harrison,
Jonathan
Lifshitz
Journal of Neuroinflammation 2012, 9 :247 (30 October 2012)
Abstract | Full text | PDF | PubMed
20.
Staphylococcus aureus and Escherichia coli have disparate dependences on KsgA for growth and ribosome biogenesis
Heather
C
O’Farrell,
Jason
P
Rife
BMC Microbiology 2012, 12 :244 (24 October 2012)
Abstract | Full text | PDF | PubMed
21.
Non-linear dynamical signal characterization for prediction of defibrillation success through machine learning
Sharad
Shandilya,
Kevin
Ward,
Michael
Kurz,
Kayvan
Najarian
BMC Medical Informatics and Decision Making 2012, 12 :116 (15 October 2012)
Abstract | Full text | PDF | PubMed
22.
A confirmatory factor analysis of the metabolic syndrome in adolescents: an examination of sex and racial/ethnic differences
Matthew
J
Gurka,
Christa
L
Ice,
Shumei
S
Sun,
Mark
D
DeBoer
Cardiovascular Diabetology 2012, 11 :128 (13 October 2012)
Abstract | Full text | PDF | PubMed
23.
A program for sustained improvement in preventing ventilator associated pneumonia in an intensive care setting
Raquel
A
Caserta,
Alexandre
R
Marra,
Marcelino
S
Durão,
Cláudia
Silva,
Oscar
Pavao dos Santos,
Henrique Sutton
Neves,
Michael
B
Edmond,
Karina
Timenetsky
BMC Infectious Diseases 2012, 12 :234 (29 September 2012)
Abstract | Full text | PDF | PubMed
24.
Patient- and population-level health consequences of discontinuing antiretroviral therapy in settings with inadequate HIV treatment availability
April
D
Kimmel,
Stephen
C
Resch,
Xavier
Anglaret,
Norman
Daniels,
Sue
J
Goldie,
Christine
Danel,
Angela
Y
Wong,
Kenneth
A
Freedberg,
Milton
C
Weinstein
Cost Effectiveness and Resource Allocation 2012, 10 :12 (19 September 2012)
Abstract | Full text | PDF | PubMed
25.
Behavioral and physiological female responses to male sex ratio bias in a pond-breeding amphibian
Kristine
L
Grayson,
Stephen
P
De Lisle,
Jerrah
E
Jackson,
Samuel
J
Black,
Erica
J
Crespi
Frontiers in Zoology 2012, 9 :24 (18 September 2012)
Abstract | Full text | PDF | PubMed