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1.

Research article   Open Access

Estimation methods with ordered exposure subject to measurement error and missingness in semi-ecological design

Hyang-Mi Kim, Chul Gyu Park, Martie van Tongeren, Igor Burstyn BMC Medical Research Methodology 2012, 12:135 (4 September 2012)

Abstract | Full text | PDF | PubMed

2.

Research   Open Access

Handoff management in communication-based train control networks using stream control transmission protocol and IEEE 802.11p WLANs

Li Zhu, Fei Yu, Bin Ning, Tao Tang EURASIP Journal on Wireless Communications and Networking 2012, 2012:211 (9 July 2012)

Abstract | Full text | PDF

3.

Protocol   Open Access

Effectiveness of brief interventions as part of the screening, brief intervention and referral to treatment (SBIRT) model for reducing the non-medical use of psychoactive substances: a systematic review protocol

Matthew M Young, Adrienne Stevens, Amy Porath-Waller, Tyler Pirie, Chantelle Garritty, Becky Skidmore, Lucy Turner, Cheryl Arratoon, Nancy Haley, Karen Leslie, Rhoda Reardon, Beth Sproule, Jeremy Grimshaw, David Moher Systematic Reviews 2012, 1:22 (7 May 2012)

Abstract | Full text | PDF | PubMed

4.

Research   Open Access

Viral-toxin interactions and Parkinson’s disease: poly(I:C) priming enhanced the neurodegenerative effects of paraquat

Jessica Bobyn, Emily N Mangano, Anusha Gandhi, Eric Nelson, Kerry Moloney, Melanie Clarke, Shawn Hayley Journal of Neuroinflammation 2012, 9:86 (4 May 2012)

Abstract | Full text | PDF | PubMed

5.

Research   Open Access

Improving throughput and fairness by improved channel assignment using topology control based on power control for multi-radio multi-channel wireless mesh networks

Aizaz U Chaudhry, Nazia Ahmad, Roshdy HM Hafez EURASIP Journal on Wireless Communications and Networking 2012, 2012:155 (30 April 2012)

Abstract | Full text | PDF

6.

Methodology   Open Access

A novel approach to surface electromyography: an exploratory study of electrode-pair selection based on signal characteristics

Cynthia Kendell, Edward D Lemaire, Yves Losier, Adam Wilson, Adrian Chan, Bernie Hudgins Journal of NeuroEngineering and Rehabilitation 2012, 9:24 (26 April 2012)

Abstract | Full text | PDF | PubMed

7.

Introduction   Open Access

Selected papers from the 14th Annual Bio-Ontologies Special Interest Group Meeting

Larisa N Soldatova, Susanna-Assunta Sansone, Michel Dumontier, Nigam H Shah Journal of Biomedical Semantics 2012, 3(Suppl 1):I1 (24 April 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

8.

Editorial   Open Access

Advances in single carrier block modulation with frequency domain processing

Yeheskel Bar-Ness, Fumiyuki Adachi, Naofal Al Dhahir, David D Falconer, Hikmet Sari EURASIP Journal on Advances in Signal Processing 2012, 2012:85 (18 April 2012)

Abstract | Full text | PDF

9.

Methodology   Open Access

Development of a fast PCR protocol enabling rapid generation of AmpFℓSTR® Identifiler® profiles for genotyping of human DNA

Amanda Foster, Nancy Laurin Investigative Genetics 2012, 3:6 (6 March 2012)

Abstract | Full text | PDF | PubMed

10.

Meeting abstract   Open Access

Two decades of biomonitoring polar bear health in Greenland: a review

Christian Sonne, Robert J Letcher, Thea Ø Bechshøft, Frank F Rigét, Derek CG Muir, Pall S Leifsson, Erik W Born, Lars Hyldstrup, Niladri Basu, Maja Kirkegaard, Rune Dietz Acta Veterinaria Scandinavica 2012, 54(Suppl 1):S15 (24 February 2012)

Abstract | Full text | PDF

11.

Research   Open Access

Examining the gender, ethnicity, and age dimensions of the healthy immigrant effect: Factors in the development of equitable health policy

Karen M Kobayashi, Steven G Prus International Journal for Equity in Health 2012, 11:8 (16 February 2012)

Abstract | Full text | PDF | PubMed

12.

Research article   Open Access Highly Accessed

Self-organizing ontology of biochemically relevant small molecules

Leonid L Chepelev, Janna Hastings, Marcus Ennis, Christoph Steinbeck, Michel Dumontier BMC Bioinformatics 2012, 13:3 (6 January 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

13.

Research article   Open Access

Thyroid hormone-regulated gene expression in juvenile mouse liver: identification of thyroid response elements using microarray profiling and in silico analyses

Martin A Paquette, Hongyan Dong, Rémi Gagné, Andrew Williams, Morie Malowany, Mike G Wade, Carole L Yauk BMC Genomics 2011, 12:634 (29 December 2011)

Abstract | Full text | PDF | PubMed

14.

Methodology article   Open Access Highly Accessed

Integrating systems biology models and biomedical ontologies

Robert Hoehndorf, Michel Dumontier, John H Gennari, Sarala Wimalaratne, Bernard de Bono, Daniel L Cook, Georgios V Gkoutos BMC Systems Biology 2011, 5:124 (11 August 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

15.

Research article   Open Access

Combined analysis of transcriptome and metabolite data reveals extensive differences between black and brown nearly-isogenic soybean (Glycine max) seed coats enabling the identification of pigment isogenes

Nik Kovinich, Ammar Saleem, John T Arnason, Brian Miki BMC Genomics 2011, 12:381 (29 July 2011)

Abstract | Full text | PDF | PubMed

16.

Methodology article   Open Access

Prototype semantic infrastructure for automated small molecule classification and annotation in lipidomics

Leonid L Chepelev, Alexandre Riazanov, Alexandre Kouznetsov, Hong Low, Michel Dumontier, Christopher JO Baker BMC Bioinformatics 2011, 12:303 (26 July 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

17.

Research   Open Access

An in vivo animal study assessing long-term changes in hypothalamic cytokines following perinatal exposure to a chemical mixture based on Arctic maternal body burden

Shawn Hayley, Emily Mangano, Geoffrey Crowe, Nanqin Li, Wayne J Bowers Environmental Health 2011, 10:65 (11 July 2011)

Abstract | Full text | PDF | PubMed

18.

Methodology article   Open Access Highly Accessed

Binding Site Prediction for Protein-Protein Interactions and Novel Motif Discovery using Re-occurring Polypeptide Sequences

Adam Amos-Binks, Catalin Patulea, Sylvain Pitre, Andrew Schoenrock, Yuan Gui, James R Green, Ashkan Golshani, Frank Dehne BMC Bioinformatics 2011, 12:225 (2 June 2011)

Abstract | Full text | PDF | PubMed

19.

Methodology   Open Access Highly Accessed

Chemical Entity Semantic Specification: Knowledge representation for efficient semantic cheminformatics and facile data integration

Leonid L Chepelev, Michel Dumontier Journal of Cheminformatics 2011, 3:20 (19 May 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | Graphical abstract

20.

Proceedings   Open Access

Integration and publication of heterogeneous text-mined relationships on the Semantic Web

Adrien Coulet, Yael Garten, Michel Dumontier, Russ B Altman, Mark A Musen, Nigam H Shah Journal of Biomedical Semantics 2011, 2(Suppl 2):S10 (17 May 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

21.

Proceedings   Open Access

HyQue: evaluating hypotheses using Semantic Web technologies

Alison Callahan, Michel Dumontier, Nigam H Shah Journal of Biomedical Semantics 2011, 2(Suppl 2):S3 (17 May 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

22.

Proceedings   Open Access Highly Accessed

The Translational Medicine Ontology and Knowledge Base: driving personalized medicine by bridging the gap between bench and bedside

Joanne S Luciano, Bosse Andersson, Colin Batchelor, Olivier Bodenreider, Tim Clark, Christine K Denney, Christopher Domarew, Thomas Gambet, Lee Harland, Anja Jentzsch, Vipul Kashyap, Peter Kos, Julia Kozlovsky, Timothy Lebo, Scott M Marshall, James P McCusker, Deborah L McGuinness, Chimezie Ogbuji, Elgar Pichler, Robert L Powers, Eric Prud’hommeaux, Matthias Samwald, Lynn Schriml, Peter J Tonellato, Patricia L Whetzel, Jun Zhao, Susie Stephens, Michel Dumontier Journal of Biomedical Semantics 2011, 2(Suppl 2):S1 (17 May 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

23.

Methodology   Open Access

Semantic Web integration of Cheminformatics resources with the SADI framework

Leonid L Chepelev, Michel Dumontier Journal of Cheminformatics 2011, 3:16 (16 May 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | Graphical abstract

24.

Research   Open Access

The caregiving relationship and quality of life among partners of stroke survivors: A cross-sectional study

Christine J McPherson, Keith G Wilson, Livia Chyurlia, Charles Leclerc Health and Quality of Life Outcomes 2011, 9:29 (9 May 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

25.

Commentary   Open Access

Integrating findings of traditional medicine with modern pharmaceutical research: the potential role of linked open data

Matthias Samwald, Michel Dumontier, Jun Zhao, Joanne S Luciano, Michael Marshall, Kei Cheung Chinese Medicine 2010, 5:43 (17 December 2010)

Abstract | Full text | PDF | PubMed

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