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Work published with BioMed Central, Chemistry Central and SpringerOpen by researchers at Columbia University

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1.

Proceedings   Open Access

Homology-based inference sets the bar high for protein function prediction

Tobias Hamp, Rebecca Kassner, Stefan Seemayer, Esmeralda Vicedo, Christian Schaefer, Dominik Achten, Florian Auer, Ariane Boehm, Tatjana Braun, Maximilian Hecht, Mark Heron, Peter Hönigschmid, Thomas A Hopf, Stefanie Kaufmann, Michael Kiening, Denis Krompass, Cedric Landerer, Yannick Mahlich, Manfred Roos, Burkhard Rost BMC Bioinformatics 2013, 14(Suppl 3):S7 (28 February 2013)

Abstract | Full text | PDF

2.

Research article   Open Access

Role of p73 in Alzheimer disease: lack of association in mouse models or in human cohorts

Badri Vardarajan, David Vergote, Fadel Tissir, Mark Logue, Jing Yang, Nathalie Daude, Kunie Ando, Ekaterina Rogaeva, Joseph Lee, Rong Cheng, Jean-Pierre Brion, Mahdi Ghani, Beipei Shi, Clinton T Baldwin, Satyabrata Kar, Richard Mayeux, Paul Fraser, André M Goffinet, Peter St George-Hyslop, Lindsay A Farrer, David Westaway Molecular Neurodegeneration 2013, 8:10 (15 February 2013)

Abstract | Provisional PDF | PubMed

3.

Research   Open Access

The Chinese community patient’s life satisfaction, assessment of community medical service, and trust in community health delivery system

Liyang Tang Health and Quality of Life Outcomes 2013, 11:18 (13 February 2013)

Abstract | Full text | PDF | PubMed

4.

Research article   Open Access

How mistimed and unwanted pregnancies affect timing of antenatal care initiation in three districts in Tanzania

Amon Exavery, Almamy Malick Kanté, Ahmed Hingora, Godfrey Mbaruku, Senga Pemba, James F Phillips BMC Pregnancy and Childbirth 2013, 13:35 (6 February 2013)

Abstract | Full text | PDF | PubMed

5.

Research article   Open Access Highly Accessed

Predictors of indoor absolute humidity and estimated effects on influenza virus survival in grade schools

Tyler H Koep, Felicity T Enders, Chris Pierret, Stephen C Ekker, Dale Krageschmidt, Kevin L Neff, Marc Lipsitch, Jeffrey Shaman, W Charles Huskins BMC Infectious Diseases 2013, 13:71 (5 February 2013)

Abstract | Full text | PDF | PubMed

6.

Research   Open Access Highly Accessed

Public health program capacity for sustainability: a new framework

Sarah F Schell, Douglas A Luke, Michael W Schooley, Michael B Elliott, Stephanie H Herbers, Nancy B Mueller, Alicia C Bunger Implementation Science 2013, 8:15 (1 February 2013)

Abstract | Provisional PDF | PubMed

7.

Research article   Open Access Highly Accessed

Health information technology capacity at federally qualified health centers: a mechanism for improving quality of care

Jemima A Frimpong, Bradford E Jackson, LaShonda M Stewart, Karan P Singh, Patrick A Rivers, Sejong Bae BMC Health Services Research 2013, 13:35 (31 January 2013)

Abstract | Full text | PDF | PubMed

8.

Oral presentation   Open Access

Chronic Obstructive Pulmonary Disease (COPD) is associated with pulmonary artery stiffness - the MESA COPD study

Chia-Ying Liu, Megha Parikh, Antoinette S Gomes, Jens Vogel-Claussen, David A Bluemke, Joao A Lima, Martin R Prince, Graham Barr Journal of Cardiovascular Magnetic Resonance 2013, 15(Suppl 1):O62 (30 January 2013)

Full text | PDF

9.

Nano Express   Open Access

Energy absorption ability of buckyball C720 at low impact speed: a numerical study based on molecular dynamics

Jun Xu, Yibing Li, Yong Xiang, Xi Chen Nanoscale Research Letters 2013, 8:54 (29 January 2013)

Abstract | Full text | PDF | PubMed

10.

Review   Open Access Highly Accessed

HIV testing and care in Burkina Faso, Kenya, Malawi and Uganda: ethics on the ground

Carla Makhlouf Obermeyer, Sarah Bott, Ron Bayer, Alice Desclaux, Rachel Baggaley, BMC International Health and Human Rights 2013, 13:6 (23 January 2013)

Abstract | Full text | PDF | PubMed

11.

Research article   Open Access Highly Accessed

Transcriptome comparison and gene coexpression network analysis provide a systems view of citrus response to ‘Candidatus Liberibacter asiaticus’ infection

Zhi-Liang Zheng, Yihong Zhao BMC Genomics 2013, 14:27 (16 January 2013)

Abstract | Full text | PDF | PubMed

12.

Research article   Open Access

Redundancy in electronic health record corpora: analysis, impact on text mining performance and mitigation strategies

Raphael Cohen, Michael Elhadad, Noémie Elhadad BMC Bioinformatics 2013, 14:10 (16 January 2013)

Abstract | Provisional PDF | PubMed

13.

Research   Open Access

A negative selection heuristic to predict new transcriptional targets

Luigi Cerulo, Vincenzo Paduano, Pietro Zoppoli, Michele Ceccarelli BMC Bioinformatics 2013, 14(Suppl 1):S3 (14 January 2013)

Abstract | Full text | PDF | PubMed

14.

Commentary   Open Access

Neurologist practice patterns in treatment of muscle cramps in Canada

Mary Jane Lim Fat, Seint Kokokyi, Hans Dieter Katzberg Journal of Foot and Ankle Research 2013, 6:2 (9 January 2013)

Abstract | Full text | PDF | PubMed

15.

Research   Open Access

Considering trauma exposure in the context of genetics studies of posttraumatic stress disorder: a systematic review

Julia DiGangi, Guia Guffanti, Katie A McLaughlin, Karestan C Koenen Biology of Mood & Anxiety Disorders 2013, 3:2 (3 January 2013)

Abstract | Provisional PDF | PubMed

16.

Research   Open Access Highly Accessed

A yeast phenomic model for the gene interaction network modulating CFTR-ΔF508 protein biogenesis

Raymond J Louie, Jingyu Guo, John W Rodgers, Rick White, Najaf A Shah, Silvere Pagant, Peter Kim, Michael Livstone, Kara Dolinski, Brett A McKinney, Jeong Hong, Eric J Sorscher, Jennifer Bryan, Elizabeth A Miller, John L Hartman IV Genome Medicine 2012, 4:103 (27 December 2012)

Abstract | Full text | PDF | PubMed |  Editor’s summary

A quantitative model to study genes interacting with the yeast equivalent of the most common cystic fibrosis mutation confirms known genes and reveals new pathways of putative modifier genes.

17.

Research   Open Access

HIV serostatus disclosure is not associated with safer sexual behavior among HIV-positive men who have sex with men (MSM) and their partners at risk for infection in Bangkok, Thailand

Nneka Edwards-Jackson, Nittaya Phanuphak, Hong Van Tieu, Nitiya Chomchey, Nipat Teeratakulpisarn, Wassana Sathienthammawit, Charnwit Pakam, Nutthasun Pharachetsakul, Magdalena E Sobieszczyk, Praphan Phanuphak, Jintanat Ananworanich AIDS Research and Therapy 2012, 9:38 (23 December 2012)

Abstract | Full text | PDF | PubMed

18.

Research article   Open Access Highly Accessed

Role of condom negotiation on condom use among women of reproductive age in three districts in Tanzania

Amon Exavery, Almamy M Kanté, Elizabeth Jackson, John Noronha, Gloria Sikustahili, Kassimu Tani, Hildegalda P Mushi, Colin Baynes, Kate Ramsey, Ahmed Hingora, James F Phillips BMC Public Health 2012, 12:1097 (20 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

19.

Review   Open Access

The six most essential questions in psychiatric diagnosis: a pluralogue. Part 4: general conclusion

James Phillips, Allen Frances, Michael A Cerullo, John Chardavoyne, Hannah S Decker, Michael B First, Nassir Ghaemi, Gary Greenberg, Andrew C Hinderliter, Warren A Kinghorn, Steven G LoBello, Elliott B Martin, Aaron L Mishara, Joel Paris, Joseph M Pierre, Ronald W Pies, Harold A Pincus, Douglas Porter, Claire Pouncey, Michael A Schwartz, Thomas Szasz, Jerome C Wakefield, G Scott Waterman, Owen Whooley, Peter Zachar Philosophy, Ethics, and Humanities in Medicine 2012, 7:14 (18 December 2012)

Abstract | Full text | PDF | PubMed

20.

Research   Open Access Highly Accessed

Risk factors for dementia after critical illness in elderly medicare beneficiaries

Carmen Guerra, Walter T Linde-Zwirble, Hannah Wunsch Critical Care 2012, 16:R233 (17 December 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Patients experiencing events such as infection, severe sepsis, or neurologic dysfunction during hospitalization are at a higher risk of receiving a subsequent diagnosis of dementia. 

21.

Research article   Open Access

Caspase-9 mediates synaptic plasticity and memory deficits of Danish dementia knock-in mice: caspase-9 inhibition provides therapeutic protection

Robert Tamayev, Nsikan Akpan, Ottavio Arancio, Carol M Troy, Luciano D’Adamio Molecular Neurodegeneration 2012, 7:60 (10 December 2012)

Abstract | Full text | PDF | PubMed

22.

Study protocol   Open Access

Infant and childhood neurodevelopmental outcomes following prenatal exposure to selective serotonin reuptake inhibitors: overview and design of a Finnish Register-Based Study (FinESSI)

Heli Malm, Miia Artama, Alan S Brown, Mika Gissler, David Gyllenberg, Susanna Hinkka-Yli-Salomäki, Ian McKeague, Andre Sourander BMC Psychiatry 2012, 12:217 (4 December 2012)

Abstract | Full text | PDF | PubMed

23.

Opinion   Free Highly Accessed

Designing a post-genomics knowledge ecosystem to translate pharmacogenomics into public health action

Edward S Dove, Samer A Faraj, Eugene Kolker, Vural Özdemir Genome Medicine 2012, 4:91 (29 November 2012)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Vural Ozdemir and colleagues discuss the need for narrators, such as philosophers and citizen scientists, to work with scientists to translate pharmacogenomic advances to the clinic.

24.

Research article   Open Access

Profound tumor-specific Th2 bias in patients with malignant glioma

Shinji Shimato, Lisa M Maier, Richard Maier, Jeffrey N Bruce, Richard CE Anderson, David E Anderson BMC Cancer 2012, 12:561 (27 November 2012)

Abstract | Full text | PDF | PubMed

25.

Research   Open Access Highly Accessed

Effects of the neurological wake-up test on clinical examination, intracranial pressure, brain metabolism and brain tissue oxygenation in severely brain-injured patients

Raimund Helbok, Pedro Kurtz, Michael J Schmidt, Morgan R Stuart, Luis Fernandez, Sander E Connolly, Kiwon Lee, Erich Schmutzhard, Stephan A Mayer, Jan Claassen, Neeraj Badjatia Critical Care 2012, 16:R226 (27 November 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

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