1.
A hybrid next generation transcript sequencing-based approach to identify allelic and homeolog-specific single nucleotide polymorphisms in allotetraploid white clover
Istvan
Nagy,
Susanne
Barth,
Jeanne
Mehenni-Ciz,
Michael
T
Abberton,
Dan
Milbourne
BMC Genomics 2013, 14 :100 (13 February 2013)
Abstract | Provisional PDF
| PubMed
2.
Snpdat: Easy and rapid annotation of results from de novo snp discovery projects for model and non-model organisms
Anthony
G
Doran,
Christopher
J
Creevey
BMC Bioinformatics 2013, 14 :45 (8 February 2013)
Abstract | Full text | PDF | PubMed
3.
Consistent mutational paths predict eukaryotic thermostability
Vera
van Noort,
Bettina
Bradatsch,
Manimozhiyan
Arumugam,
Stefan
Amlacher,
Gert
Bange,
Chris
Creevey,
Sebastian
Falk,
Daniel
R
Mende,
Irmgard
Sinning,
Ed
Hurt,
Peer
Bork
BMC Evolutionary Biology 2013, 13 :7 (10 January 2013)
Abstract | Full text | PDF | PubMed
4.
Anthelmintic-resistant nematodes in Irish commercial sheep flocks- the state of play
Barbara
Good,
James Patrick
Hanrahan,
Daniel Theodorus
de Waal,
Thomas
Patten,
Andrew
Kinsella,
Ciaran Oliver
Lynch
Irish Veterinary Journal 2012, 65 :21 (22 December 2012)
Abstract | Full text | PDF | PubMed
5.
Effect of milk feed source, frequency of feeding and age at turnout on calf performance, live-weight at mating and 1st lactation milk production
David
Gleeson,
Bernadette
O’Brien
Irish Veterinary Journal 2012, 65 :18 (18 October 2012)
Abstract | Full text | PDF | PubMed
6.
Global endometrial transcriptomic profiling: transient immune activation precedes tissue proliferation and repair in healthy beef cows
Cathriona
Foley,
Aspinas
Chapwanya,
Christopher
J
Creevey,
Fernando
Narciandi,
Derek
Morris,
Elaine
M
Kenny,
Paul
Cormican,
John
J
Callanan,
Cliona
O’Farrelly,
Kieran
G
Meade
BMC Genomics 2012, 13 :489 (18 September 2012)
Abstract | Full text | PDF | PubMed
7.
Runs of homozygosity and population history in cattle
Deirdre
C
Purfield,
Donagh
P
Berry,
Sinead
McParland,
Daniel
G
Bradley
BMC Genetics 2012, 13 :70 (14 August 2012)
Abstract | Full text | PDF | PubMed
8.
SNP variation in the promoter of the PRKAG3 gene and association with meat quality traits in pig
Marion
T
Ryan,
Ruth
M
Hamill,
Aisling
M
O’Halloran,
Grace
C
Davey,
Jean
McBryan,
Anne
M
Mullen,
Chris
McGee,
Marina
Gispert,
Olwen
I
Southwood,
Torres
Sweeney
BMC Genetics 2012, 13 :66 (25 July 2012)
Abstract | Full text | PDF | PubMed
9.
A case of bovine raw milk contamination with Listeria monocytogenes
Karen
Hunt,
Niall
Drummond,
Mary
Murphy,
Francis
Butler,
Jim
Buckley,
Kieran
Jordan
Irish Veterinary Journal 2012, 65 :13 (6 July 2012)
Abstract | Full text | PDF | PubMed
10.
Predicted costs and benefits of eradicating BVDV from Ireland
Alistair
W
Stott,
Roger
W
Humphry,
George
J
Gunn,
Isabella
Higgins,
Thia
Hennessy,
Joe
O’Flaherty,
David
A
Graham
Irish Veterinary Journal 2012, 65 :12 (2 July 2012)
Abstract | Full text | PDF | PubMed
11.
Good animal welfare makes economic sense: potential of pig abattoir meat inspection as a welfare surveillance tool
Sarah
Harley,
Simon
More,
Laura
Boyle,
Niamh
Connell,
Alison
Hanlon
Irish Veterinary Journal 2012, 65 :11 (27 June 2012)
Abstract | Full text | PDF | PubMed
12.
C:N:P stoichiometry and nutrient limitation of the soil microbial biomass in a grazed grassland site under experimental P limitation or excess
Bryan
S
Griffiths,
Annette
Spilles,
Michael
Bonkowski
Ecological Processes 2012, 1 :6 (21 June 2012)
Abstract | Full text | PDF
13.
Transcriptomic analysis of the stress response to weaning at housing in bovine leukocytes using RNA-seq technology
Aran
O’Loughlin,
David
J
Lynn,
Mark
McGee,
Sean
Doyle,
Matthew
McCabe,
Bernadette
Earley
BMC Genomics 2012, 13 :250 (18 June 2012)
Abstract | Full text | PDF | PubMed
14.
RNA-seq analysis of differential gene expression in liver from lactating dairy cows divergent in negative energy balance
Matthew
McCabe,
Sinéad
Waters,
Dermot
Morris,
David
Kenny,
David
Lynn,
Chris
Creevey
BMC Genomics 2012, 13 :193 (20 May 2012)
Abstract | Full text | PDF | PubMed
15.
Genome-wide associations for milk production and somatic cell score in Holstein-Friesian cattle in Ireland
Brian
K
Meredith,
Francis
J
Kearney,
Emma
K
Finlay,
Daniel
G
Bradley,
Alan
G
Fahey,
Donagh
P
Berry,
David
J
Lynn
BMC Genetics 2012, 13 :21 (26 March 2012)
Abstract | Full text | PDF | PubMed
16.
Exploiting the inter-strain divergence of Fusarium oxysporum for microbial bioprocessing of lignocellulose to bioethanol
Shahin
S
Ali,
Mojibur
Khan,
Brian
Fagan,
Ewen
Mullins,
Fiona
M
Doohan
AMB Express 2012, 2 :16 (15 March 2012)
Abstract | Full text | PDF | PubMed
17.
Polymorphism discovery and allele frequency estimation using high-throughput DNA sequencing of target-enriched pooled DNA samples
Michael
P
Mullen,
Christopher
J
Creevey,
Donagh
P
Berry,
Matt
S
McCabe,
David
A
Magee,
Dawn
J
Howard,
Aideen
P
Killeen,
Stephen
D
Park,
Paul
A
McGettigan,
Matt
C
Lucy,
David
E
MacHugh,
Sinead
M
Waters
BMC Genomics 2012, 13 :16 (11 January 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
18.
Effect of pre-weaning concentrate supplementation on peripheral distribution of leukocytes, functional activity of neutrophils, acute phase protein and behavioural responses of abruptly weaned and housed beef calves
Eilish
M
Lynch,
Mark
McGee,
Sean
Doyle,
Bernadette
Earley
BMC Veterinary Research 2012, 8 :1 (4 January 2012)
Abstract | Full text | PDF | PubMed
19.
Genome-wide transcriptional profiling of peripheral blood leukocytes from cattle infected with Mycobacterium bovis reveals suppression of host immune genes
Kate
E
Killick,
John
A
Browne,
Stephen
DE
Park,
David
A
Magee,
Irene
Martin,
Kieran
G
Meade,
Stephen
V
Gordon,
Eamonn
Gormley,
Cliona
O'Farrelly,
Karsten
Hokamp,
David
E
MacHugh
BMC Genomics 2011, 12 :611 (19 December 2011)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
20.
Calf health from birth to weaning. III. housing and management of calf pneumonia
Ingrid
Lorenz,
Bernadette
Earley,
John
Gilmore,
Ian
Hogan,
Emer
Kennedy,
Simon
J
More
Irish Veterinary Journal 2011, 64 :14 (21 October 2011)
Abstract | Full text | PDF | PubMed
21.
Calf health from birth to weaning. I. General aspects of disease prevention
Ingrid
Lorenz,
John
F
Mee,
Bernadette
Earley,
Simon
J
More
Irish Veterinary Journal 2011, 64 :10 (16 September 2011)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
22.
Enhancing the stress responses of probiotics for a lifestyle from gut to product and back again
Susan
Mills,
Catherine
Stanton,
Gerald
F
Fitzgerald,
R Paul
Ross
Microbial Cell Factories 2011, 10 (Suppl 1):S19 (30 August 2011)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
23.
Genome sequences and comparative genomics of two Lactobacillus ruminis strains from the bovine and human intestinal tracts
Brian
M
Forde,
B
Neville,
Michelle
M
O’ Donnell,
E
Riboulet-Bisson,
M
J
Claesson,
Avril
Coghlan,
R
Ross,
Paul
W
O’ Toole
Microbial Cell Factories 2011, 10 (Suppl 1):S13 (30 August 2011)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
24.
Carbohydrate catabolic flexibility in the mammalian intestinal commensal Lactobacillus ruminis revealed by fermentation studies aligned to genome annotations
Michelle
M
O’ Donnell,
Brian
M
Forde,
B
Neville,
Paul
R
Ross,
Paul
W
O’ Toole
Microbial Cell Factories 2011, 10 (Suppl 1):S12 (30 August 2011)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
25.
Inhibitory activity of Lactobacillus plantarum LMG P-26358 against Listeria innocua when used as an adjunct starter in the manufacture of cheese
Susan
Mills,
L Mariela
Serrano,
Carmel
Griffin,
Paula
M
O'Connor,
Gwenda
Schaad,
Chris
Bruining,
Colin
Hill,
R Paul
Ross,
Wilco
C
Meijer
Microbial Cell Factories 2011, 10 (Suppl 1):S7 (30 August 2011)
Abstract | Full text | PDF | PubMed