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	1.	Methodology article Using cited references to improve the retrieval of related biomedical documents Francisco M Ortuño, Ignacio Rojas, Miguel A Andrade-Navarro, Jean-Fred Fontaine BMC Bioinformatics 2013, 14:113 (27 March 2013) Abstract \| Full text \| PDF \| PubMed
	2.	Research article Wdr66 is a novel marker for risk stratification and involved in epithelial-mesenchymal transition of esophageal squamous cell carcinoma Qing Wang, Chenming Ma, Wolfgang Kemmner BMC Cancer 2013, 13:137 (21 March 2013) Abstract \| Full text \| PDF \| PubMed
	3.	Correction Correction: Reliable transgene-independent method for determining sleeping beauty transposon copy numbers Orsolya Kolacsek, Virág Krízsik, Anita Schamberger, Zsuzsa Erdei, Ágota Apáti, György Várady, Lajos Mátés, Zsuzsanna Izsvák, Zoltán Ivics, Balázs Sarkadi, Tamás I Orbán Mobile DNA 2013, 4:11 (15 March 2013) Abstract \| Full text \| PDF \| PubMed
	4.	Research Assessment of the right ventricle with cardiovascular magnetic resonance at 7 Tesla Florian von Knobelsdorff-Brenkenhoff, Valeriy Tkachenko, Lukas Winter, Jan Rieger, Christof Thalhammer, Fabian Hezel, Andreas Graessl, Matthias A Dieringer, Thoralf Niendorf, Jeanette Schulz-Menger Journal of Cardiovascular Magnetic Resonance 2013, 15:23 (14 March 2013) Abstract \| Full text \| PDF \| PubMed
	5.	Short Report Cell division promotes efficient retrotransposition in a stable L1 reporter cell line Yi Xie, Lajos Mates, Zoltán Ivics, Zsuzsanna Izsvák, Sandra L Martin, Wenfeng An Mobile DNA 2013, 4:10 (6 March 2013) Abstract \| Full text \| PDF \| PubMed
	6.	Review Epigallocatechin-3-gallate: a useful, effective and safe clinical approach for targeted prevention and individualised treatment of neurological diseases? Anja Mähler, Silvia Mandel, Mario Lorenz, Urs Ruegg, Erich E Wanker, Michael Boschmann, Friedemann Paul EPMA Journal 2013, 4:5 (18 February 2013) Abstract \| Full text \| PDF \| PubMed
	7.	Workshop presentation *High spatial and temporal myocardial CINE T2 mapping at 7.0 T: a feasibility study** F Hezel, C Thalhammer, S Waiczies, J Schulz-Menger, T Niendorf Journal of Cardiovascular Magnetic Resonance 2013, 15(Suppl 1):W29 (30 January 2013) Full text \| PDF
	8.	Hypothesis Closing the circle of germline and stem cells: the Primordial Stem Cell hypothesis Jordi Solana EvoDevo 2013, 4:2 (8 January 2013) Abstract \| Full text \| PDF \| PubMed
	9.	Research highlight Mining the literature: new methods to exploit keyword profiles Miguel A Andrade-Navarro Genome Medicine 2012, 4:81 (30 October 2012) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary Miguel Andrade-Navarro highlights two recent publications by Wasserman et al. demonstrating that keyword profiles can be used to detect new associations between genes and inherited diseases.
	10.	Research Peer2ref: a peer-reviewer finding web tool that uses author disambiguation Miguel A Andrade-Navarro, Gareth A Palidwor, Carol Perez-Iratxeta BioData Mining 2012, 5:14 (7 September 2012) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary A new web tool which uses author disambiguation and usage based keywords is shown to enhance the automated search of peer reviewers, particularly those who operate in narrow areas of research.
	11.	Research article *Conserved cis-regulatory regions in a large genomic landscape control SHH and BMP-regulated Gremlin1* expression in mouse limb buds** Aimée Zuniga, Frédéric Laurent, Javier Lopez-Rios, Christian Klasen, Nicolas Matt, Rolf Zeller BMC Developmental Biology 2012, 12:23 (13 August 2012) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary Distant cis-regulatory regions scattered through a larger genome region control the highly dynamic expression of Gremlin1 (GREM1), a Bone Morphogenetic Protein (BMP) antagonist, which is key to normal progression of mouse limb bud development.
	12.	Research SNPs in the coding region of the metastasis-inducing gene MACC1 and clinical outcome in colorectal cancer Felicitas Schmid, Susen Burock, Konrad Klockmeier, Peter M Schlag, Ulrike Stein Molecular Cancer 2012, 11:49 (29 July 2012) Abstract \| Full text \| PDF \| PubMed
	13.	Research article Multi-compartmental modeling of SORLA’s influence on amyloidogenic processing in Alzheimer’s disease Angelyn Lao, Vanessa Schmidt, Yvonne Schmitz, Thomas E Willnow, Olaf Wolkenhauer BMC Systems Biology 2012, 6:74 (22 June 2012) Abstract \| Full text \| PDF \| PubMed
	14.	Research article Divergent gene expression in the conserved dauer stage of the nematodes Pristionchus pacificus and Caenorhabditis elegans Amit Sinha, Ralf J Sommer, Christoph Dieterich BMC Genomics 2012, 13:254 (19 June 2012) Abstract \| Full text \| PDF \| PubMed
	15.	Research article MicroRNA-143 down-regulates Hexokinase 2 in colon cancer cells Lea H Gregersen, Anders Jacobsen, Lisa B Frankel, Jiayu Wen, Anders Krogh, Anders H Lund BMC Cancer 2012, 12:232 (12 June 2012) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	16.	Research article Proteome dynamics and early salt stress response of the photosynthetic organism Chlamydomonas reinhardtii Guido Mastrobuoni, Susann Irgang, Matthias Pietzke, Heike E Aßmus, Markus Wenzel, Waltraud X Schulze, Stefan Kempa BMC Genomics 2012, 13:215 (31 May 2012) Abstract \| Full text \| PDF \| PubMed
	17.	Research Defining the molecular profile of planarian pluripotent stem cells using a combinatorial RNA-seq, RNA interference and irradiation approach Jordi Solana, Damian Kao, Yuliana Mihaylova, Farah Jaber-Hijazi, Sunir Malla, Ray Wilson, Aziz Aboobaker Genome Biology 2012, 13:R19 (22 March 2012) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary Planarian stem cells are ablated by RNAi against histone 2B and the neoblast-specific transcriptome is determined
	18.	Research Insights into the structure and activity of prototype foamy virus RNase H Berit Leo, Maximilian J Hartl, Kristian Schweimer, Florian Mayr, Birgitta M Wöhrl Retrovirology 2012, 9:14 (10 February 2012) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary This paper demonstrates that the independent PFV RNase H domain is structured and active. The presence of the C-helix in PFV RNase H could be confirmed by assigning the protein backbone and calculating the chemical shift index using NMR spectroscopy.
	19.	Software article Caipirini: using gene sets to rank literature Theodoros G Soldatos, Seán I O'Donoghue, Venkata P Satagopam, Adriano Barbosa-Silva, Georgios A Pavlopoulos, Ana Wanderley-Nogueira, Nina Soares-Cavalcanti, Reinhard Schneider BioData Mining 2012, 5:1 (1 February 2012) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary 'Caipirini', a new software program, allows ranking of biomedical literature based on biological relevance to gene sets, thereby enabling data from these high-throughput experiments to be more easily accessed.
	20.	Research article Multi-locus stepwise regression: a haplotype-based algorithm for finding genetic associations applied to atopic dermatitis Sven Knüppel, Jorge Esparza-Gordillo, Ingo Marenholz, Hermann-Georg Holzhütter, Anja Bauerfeind, Andreas Ruether, Stephan Weidinger, Young-Ae Lee, Klaus Rohde BMC Medical Genetics 2012, 13:8 (27 January 2012) Abstract \| Full text \| PDF \| PubMed
	21.	Research article Sonic hedgehog lineage in the mouse hypothalamus: from progenitor domains to hypothalamic regions Gonzalo Alvarez-Bolado, Fabian A Paul, Sandra Blaess Neural Development 2012, 7:4 (20 January 2012) Abstract \| Full text \| PDF \| PubMed
	22.	Proceedings Preimplantation development regulatory pathway construction through a text-mining approach Elisa Donnard, Adriano Barbosa-Silva, Rafael LM Guedes, Gabriel R Fernandes, Henrique Velloso, Matthew J Kohn, Miguel A Andrade-Navarro, J Ortega BMC Genomics 2011, 12(Suppl 4):S3 (22 December 2011) Abstract \| Full text \| PDF \| PubMed
	23.	Software PESCADOR, a web-based tool to assist text-mining of biointeractions extracted from PubMed queries Adriano Barbosa-Silva, Jean-Fred Fontaine, Elisa R Donnard, Fernanda Stussi, J Ortega, Miguel A Andrade-Navarro BMC Bioinformatics 2011, 12:435 (9 November 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	24.	Research The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text Martin Krallinger, Miguel Vazquez, Florian Leitner, David Salgado, Andrew Chatr-aryamontri, Andrew Winter, Livia Perfetto, Leonardo Briganti, Luana Licata, Marta Iannuccelli, Luisa Castagnoli, Gianni Cesareni, Mike Tyers, Gerold Schneider, Fabio Rinaldi, Robert Leaman, Graciela Gonzalez, Sergio Matos, Sun Kim, W Wilbur, Luis Rocha, Hagit Shatkay, Ashish V Tendulkar, Shashank Agarwal, Feifan Liu, Xinglong Wang, Rafal Rak, Keith Noto, Charles Elkan, Zhiyong Lu et al. BMC Bioinformatics 2011, 12(Suppl 8):S3 (3 October 2011) Abstract \| Full text \| PDF \| PubMed
	25.	Technical Note QiSampler: evaluation of scoring schemes for high-throughput datasets using a repetitive sampling strategy on gold standards Jean F Fontaine, Bernhard Suter, Miguel A Andrade-Navarro BMC Research Notes 2011, 4:57 (9 March 2011) Abstract \| Full text \| PDF \| PubMed
	26.	Methodology *Reliable transgene-independent method for determining Sleeping Beauty* transposon copy numbers** Orsolya Kolacsek, Virág Krízsik, Anita Schamberger, Zsuzsa Erdei, Ágota Apáti, György Várady, Lajos Mátés, Zsuzsanna Izsvák, Zoltán Ivics, Balázs Sarkadi, Tamás I Orbán Mobile DNA 2011, 2:5 (3 March 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	27.	Research Identification of early molecular markers for breast cancer Céline Kretschmer, Anja Sterner-Kock, Friederike Siedentopf, Winfried Schoenegg, Peter M Schlag, Wolfgang Kemmner Molecular Cancer 2011, 10:15 (11 February 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	28.	Research article Horizontal gene transfer of microbial cellulases into nematode genomes is associated with functional assimilation and gene turnover Werner E Mayer, Lisa N Schuster, Gabi Bartelmes, Christoph Dieterich, Ralf J Sommer BMC Evolutionary Biology 2011, 11:13 (13 January 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| 1 comment \| Editor’s summary Cellulases have been acquired by nematodes following horizontal gene transfer and analysis of their functional assimilation, gene turnover and selection provides further evidence to support models of horizontal gene transfer in eukaryotes.
	29.	Review The expanding universe of transposon technologies for gene and cell engineering Zoltán Ivics, Zsuzsanna Izsvák Mobile DNA 2010, 1:25 (7 December 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	30.	Methodology article Improved Tet-responsive promoters with minimized background expression Rainer Loew, Niels Heinz , Mathias Hampf, Hermann Bujard, Manfred Gossen BMC Biotechnology 2010, 10:81 (24 November 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	31.	Research Acoustic cardiac triggering: a practical solution for synchronization and gating of cardiovascular magnetic resonance at 7 Tesla Tobias Frauenrath, Fabian Hezel, Wolfgang Renz, Thibaut d'Orth, Matthias Dieringer, Florian von Knobelsdorff-Brenkenhoff, Marcel Prothmann, Jeanette Schulz-Menger, Thoralf Niendorf Journal of Cardiovascular Magnetic Resonance 2010, 12:67 (16 November 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	32.	Research article Pseudogenes as an alternative source of natural antisense transcripts Enrique M Muro, Miguel A Andrade-Navarro BMC Evolutionary Biology 2010, 10:338 (3 November 2010) Abstract \| Full text \| PDF \| PubMed
	33.	Research article Novel strong tissue specific promoter for gene expression in human germ cells Denis Kuzmin, Elena Gogvadze, Roman Kholodenko, Dawid P Grzela, Maxim Mityaev, Tatyana Vinogradova, Eugene Kopantzev, Galina Malakhova, Maria Suntsova, Dmitry Sokov, Zoltán Ivics, Anton Buzdin BMC Biotechnology 2010, 10:58 (17 August 2010) Abstract \| Full text \| PDF \| PubMed
	34.	Research article Systems analysis of iron metabolism: the network of iron pools and fluxes Tiago JS Lopes, Tatyana Luganskaja, Maja Vujić Spasić, Matthias W Hentze, Martina U Muckenthaler, Klaus Schümann, Jens G Reich BMC Systems Biology 2010, 4:112 (13 August 2010) Abstract \| Full text \| PDF \| PubMed
	35.	Research article Comprehensive survey of human brain microRNA by deep sequencing Ning-Yi Shao, Hai Hu, Zheng Yan, Ying Xu, Hao Hu, Corinna Menzel, Na Li, Wei Chen, Philipp Khaitovich BMC Genomics 2010, 11:409 (30 June 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	36.	Research Cannabinoid receptor CB1 mediates baseline and activity-induced survival of new neurons in adult hippocampal neurogenesis Susanne A Wolf, Anika Bick-Sander, Klaus Fabel, Perla Leal-Galicia, Svantje Tauber, Gerardo Ramirez-Rodriguez, Anke Müller, Andre Melnik, Tim P Waltinger, Oliver Ullrich, Gerd Kempermann Cell Communication and Signaling 2010, 8:12 (17 June 2010) Abstract \| Full text \| PDF \| PubMed
	37.	Research Vaccination with a plasmid DNA encoding HER-2/neu together with low doses of GM-CSF and IL-2 in patients with metastatic breast carcinoma: a pilot clinical trial Håkan Norell, Isabel Poschke, Jehad Charo, Wei Z Wei, Courtney Erskine, Marie P Piechocki, Keith L Knutson, Jonas Bergh, Elisabet Lidbrink, Rolf Kiessling Journal of Translational Medicine 2010, 8:53 (7 June 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	38.	Short report Absence of histamine-induced itch in the African naked mole-rat and "rescue" by Substance P Ewan Smith, Gregory RC Blass, Gary R Lewin, Thomas J Park Molecular Pain 2010, 6:29 (24 May 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	39.	Research article Comparison and consolidation of microarray data sets of human tissue expression Jenny Russ, Matthias E Futschik BMC Genomics 2010, 11:305 (14 May 2010) Abstract \| Full text \| PDF \| PubMed \| 1 comment
	40.	Research article Deciphering the porcine intestinal microRNA transcriptome Soroush Sharbati, Marc R Friedländer, Jutta Sharbati, Lena Hoeke, Wei Chen, Andreas Keller, Peer F Stähler, Nikolaus Rajewsky, Ralf Einspanier BMC Genomics 2010, 11:275 (30 April 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	41.	Review A reference guide for tree analysis and visualization Georgios A Pavlopoulos, Theodoros G Soldatos, Adriano Barbosa-Silva, Reinhard Schneider BioData Mining 2010, 3:1 (22 February 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	42.	Software LAITOR - Literature Assistant for Identification of Terms co-Occurrences and Relationships Adriano Barbosa-Silva, Theodoros G Soldatos, Ivan LF Magalhães, Georgios A Pavlopoulos, Jean-Fred Fontaine, Miguel A Andrade-Navarro, Reinhard Schneider, J Miguel Ortega BMC Bioinformatics 2010, 11:70 (1 February 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	43.	Research article Periostin shows increased evolutionary plasticity in its alternatively spliced region Sebastian Hoersch, Miguel A Andrade-Navarro BMC Evolutionary Biology 2010, 10:30 (28 January 2010) Abstract \| Full text \| PDF \| PubMed
	44.	Software 3PD: Rapid design of optimal primers for chromosome conformation capture assays Sebastian Fröhler, Christoph Dieterich BMC Genomics 2009, 10:635 (29 December 2009) Abstract \| Full text \| PDF \| PubMed
	45.	Research article Genetical genomic determinants of alcohol consumption in rats and humans Boris Tabakoff, Laura Saba, Morton Printz, Pam Flodman, Colin Hodgkinson, David Goldman, George Koob, Heather N Richardson, Katerina Kechris, Richard L Bell, Norbert Hübner, Matthias Heinig, Michal Pravenec, Jonathan Mangion, Lucie Legault, Maurice Dongier, Katherine M Conigrave, John B Whitfield, John Saunders, Bridget Grant, Paula L Hoffman, BMC Biology 2009, 7:70 (27 October 2009) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary Genetic pathways involving appetite, satiety and reward affect alcohol consumption in rats and humans, specifically GABAergic and dopaminergic signaling, but genes in these pathways are not linked to alcohol dependence or abuse in people.
	46.	Research article Sequence features associated with microRNA strand selection in humans and flies Hai Hu, Zheng Yan, Ying Xu, Hao Hu, Corinna Menzel, Yan Zhou, Wei Chen, Philipp Khaitovich BMC Genomics 2009, 10:413 (4 September 2009) Abstract \| Full text \| PDF \| PubMed
	47.	Poster presentation C-type natriuretic peptide is a bifurcation factor for sensory neurons Hannes Schmidt, Agne Stonkute, René Jüttner, Doris Koesling, Andreas Friebe, Robert Feil, Franz Hofmann, Fritz G Rathjen BMC Pharmacology 2009, 9(Suppl 1):P64 (11 August 2009) Full text \| PDF
	48.	Research article Non-SMC condensin I complex proteins control chromosome segregation and survival of proliferating cells in the zebrafish neural retina Sabine Seipold, Florian C Priller, Paul Goldsmith, William A Harris, Herwig Baier, Salim Abdelilah-Seyfried BMC Developmental Biology 2009, 9:40 (8 July 2009) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	49.	Meeting report Novel insights into proteomic technologies and their clinical perspective Gunnar Dittmar, Matthias Selbach Genome Med 2009, 1:53 (21 May 2009) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary A report on the Proteomic Forum 2009 conference, Berlin, Germany, 29 March to 2 April, 2009.
	50.	Meeting report Genomic parasites and genome evolution Zoltán Ivics Genome Biology 2009, 10:306 (15 April 2009) Abstract \| Full text \| PDF \| PubMed \| 1 comment \| Editor’s summary A report of the Second International Conference/Workshop on the Genomic Impact of Eukaryotic Transposable Elements, Pacific Grove, USA, 6-10 February 2009.