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Work published with BioMed Central, Chemistry Central and SpringerOpen by researchers at FZJ Julich (Helmholtz Consortium)

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1.

Research article   Open Access

Interaction between extracellular lipase LipA and the polysaccharide alginate of Pseudomonas aeruginosa

Petra Tielen, Hubert Kuhn, Frank Rosenau, Karl-Erich Jaeger, Hans-Curt Flemming, Jost Wingender BMC Microbiology 2013, 13:159 (13 July 2013)

Abstract | Full text | PDF | PubMed

2.

Poster presentation   Open Access

Effect of Alzheimer's disease on the dynamical and computational characteristics of recurrent neural networks

Claudia Bachmann, Tom Tetzlaff, Susanne Kunkel, Philipp Bamberger, Abigail Morrison BMC Neuroscience 2013, 14(Suppl 1):P282 (8 July 2013)

Full text | PDF

3.

Poster presentation   Open Access

Noise decouples covariances from interaction strength

D Grytskyy, T Tetzlaff, M Diesmann, M Helias BMC Neuroscience 2013, 14(Suppl 1):P164 (8 July 2013)

Full text | PDF

4.

Poster presentation   Open Access

From laptops to supercomputers: a single highly scalable code base for spiking neuronal network simulations

Susanne Kunkel, Maximilian Schmidt, Jochen M Eppler, Hans E Plesser, Jun Igarashi, Gen Masumoto, Tomoki Fukai, Shin Ishii, Abigail Morrison, Markus Diesmann, Moritz Helias BMC Neuroscience 2013, 14(Suppl 1):P163 (8 July 2013)

Full text | PDF

5.

Poster presentation   Open Access

Relating excess spike synchrony to LFP-locked firing rates modulations

Michael Denker, Alexa Riehle, Markus Diesmann, Sonja Grün BMC Neuroscience 2013, 14(Suppl 1):P150 (8 July 2013)

Full text | PDF

6.

Poster presentation   Open Access

Recurrence and external sources differentially shape network correlations

Moritz Helias, Tom Tetzlaff, Markus Diesmann BMC Neuroscience 2013, 14(Suppl 1):P113 (8 July 2013)

Full text | PDF

7.

Poster presentation   Open Access

Influence of different types of downscaling on a cortical microcircuit model

Sacha J van Albada, Sven Schrader, Moritz Helias, Markus Diesmann BMC Neuroscience 2013, 14(Suppl 1):P112 (8 July 2013)

Full text | PDF

8.

Poster presentation   Open Access

Integrating multi-scale data for a network model of macaque visual cortex

Maximilian Schmidt, Sacha van Albada, Rembrandt Bakker, Markus Diesmann BMC Neuroscience 2013, 14(Suppl 1):P111 (8 July 2013)

Full text | PDF

9.

Research   Open Access

Ethanol inducible expression of a mesophilic cellulase avoids adverse effects on plant development

Holger Klose, Markus Günl, Björn Usadel, Rainer Fischer, Ulrich Commandeur Biotechnology for Biofuels 2013, 6:53 (16 April 2013)

Abstract | Full text | PDF | PubMed

10.

Research   Open Access

Heterogeneous resource federation with a centralized security model for information extraction

Milad Daivandy, Denis Hünich, René Jäkel, Steffen Metzger, Ralph Müller-Pfefferkorn, Bernd Schuller Journal of Internet Services and Applications 2013, 4:10 (20 March 2013)

Abstract | Full text | PDF

11.

Case report   Open Access

Differentiation of local tumor recurrence from radiation-induced changes after stereotactic radiosurgery for treatment of brain metastasis: case report and review of the literature

Philipp Kickingereder, Franziska Dorn, Tobias Blau, Matthias Schmidt, Martin Kocher, Norbert Galldiks, Maximilian I Ruge Radiation Oncology 2013, 8:52 (6 March 2013)

Abstract | Full text | PDF | PubMed

12.

Research   Open Access

A data infrastructure reference model with applications: towards realization of a ScienceTube vision with a data replication service

Morris Riedel, Peter Wittenburg, Johannes Reetz, Mark van de Sanden, Jedrzej Rybicki, Benedikt von St Vieth, Giuseppe Fiameni, Giacomo Mariani, Alberto Michelini, Claudio Cacciari, Willem Elbers, Daan Broeder, Robert Verkerk, Elena Erastova, Michael Lautenschlaeger, Reinhard Budig, Hannes Thielmann, Peter Coveney, Stefan Zasada, Ali Haidar, Otto Buechner, Cristina Manzano, Shiraz Memon, Shahbaz Memon, Heikki Helin, Jari Suhonen, Damien Lecarpentier, Kimmo Koski, Thomas Lippert Journal of Internet Services and Applications 2013, 4:1 (30 January 2013)

Abstract | Full text | PDF

13.

Methodology   Open Access

Synchronous high-resolution phenotyping of leaf and root growth in Nicotiana tabacum over 24-h periods with GROWMAP-plant

Tom Ruts, Shizue Matsubara, Achim Walter Plant Methods 2013, 9:2 (23 January 2013)

Abstract | Full text | PDF | PubMed |  Editor’s summary

GROWMAP-plant is an elegant new method that allows growth processes to be monitored simultaneously in the above and below-ground parts of the plant over 24 h periods. The method is validated by using it to demonstrate the differences between roots and leaves in the sensitivity of their growth patterns to environmental perturbation.

14.

Methodology article   Open Access Highly Accessed

A standard numbering scheme for thiamine diphosphate-dependent decarboxylases

Constantin Vogel, Michael Widmann, Martina Pohl, Jürgen Pleiss BMC Biochemistry 2012, 13:24 (17 November 2012)

Abstract | Full text | PDF | PubMed

15.

Research   Open Access Highly Accessed

An automated workflow for enhancing microbial bioprocess optimization on a novel microbioreactor platform

Peter Rohe, Deepak Venkanna, Britta Kleine, Roland Freudl, Marco Oldiges Microbial Cell Factories 2012, 11:144 (31 October 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

16.

Research article   Open Access

Fine motor skills in adult Tourette patients are task-dependent

Irene Neuner, Jorge Arrubla, Corinna Ehlen, Hildegard Janouschek, Carlos Nordt, Bruno Fimm, Frank Schneider, N Shah, Wolfram Kawohl BMC Neurology 2012, 12:120 (11 October 2012)

Abstract | Full text | PDF | PubMed

17.

Research   Open Access

Extensive exometabolome analysis reveals extended overflow metabolism in various microorganisms

Nicole Paczia, Anke Nilgen, Tobias Lehmann, Jochem Gätgens, Wolfgang Wiechert, Stephan Noack Microbial Cell Factories 2012, 11:122 (11 September 2012)

Abstract | Full text | PDF | PubMed

18.

Poster presentation   Open Access

Taming the model zoo: a unified view on correlations in recurrent networks

Dmytro Grytskyy, Moritz Helias, Tom Tetzlaff, Markus Diesmann BMC Neuroscience 2012, 13(Suppl 1):P147 (16 July 2012)

Full text | PDF

19.

Poster presentation   Open Access

Comparing the spatio-temporal organization of joint spiking and local field potential oscillations in motor cortex

Michael Denker, Lyuba Zehl, Thomas Brochier, Alexa Riehle, Sonja Grün BMC Neuroscience 2012, 13(Suppl 1):P127 (16 July 2012)

Full text | PDF

20.

Poster presentation   Open Access

Gamma band LFP in mouse barrel cortex is coupled to respiratory rhythm

Junji Ito, Snigdha Roy, Ying Cao, Sonja Grün, Detlef Heck BMC Neuroscience 2012, 13(Suppl 1):P123 (16 July 2012)

Full text | PDF

21.

Research   Open Access

Linking the Tinnitus Questionnaire and the subjective Clinical Global Impression: Which differences are clinically important?

Ilya Adamchic, Peter Tass, Berthold Langguth, Christian Hauptmann, Michael Koller, Martin Schecklmann, Florian Zeman, Michael Landgrebe Health and Quality of Life Outcomes 2012, 10:79 (10 July 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

22.

Research article   Open Access

A minimal ligand binding pocket within a network of correlated mutations identified by multiple sequence and structural analysis of G protein coupled receptors

Subhodeep Moitra, Kalyan C Tirupula, Judith Klein-Seetharaman, Christopher Langmead BMC Biophysics 2012, 5:13 (29 June 2012)

Abstract | Full text | PDF | PubMed

23.

Method   Open Access

A high-throughput approach to identify genomic variants of bacterial metabolite producers at the single-cell level

Stephan Binder, Georg Schendzielorz, Norma Stäbler, Karin Krumbach, Kristina Hoffmann, Michael Bott, Lothar Eggeling Genome Biology 2012, 13:R40 (28 May 2012)

Abstract | Full text | PDF | PubMed |  Editor’s summary

A novel high-throughput method that uses in vivo metabolite sensors to identify bacterial metabolite producers

24.

Methodology article   Open Access

Real-time determination of intracellular oxygen in bacteria using a genetically encoded FRET-based biosensor

Janko Potzkei, Martin Kunze, Thomas Drepper, Thomas Gensch, Karl-Erich Jaeger, Jochen Büchs BMC Biology 2012, 10:28 (22 March 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

25.

Research article   Open Access

Spindles and active vortices in a model of confined filament-motor mixtures

David A Head, WJ Briels, Gerhard Gompper BMC Biophysics 2011, 4:18 (16 November 2011)

Abstract | Full text | PDF | PubMed |  Editor’s summary

A discrete filament-motor protein model of subcellular microtubule self-assembly in fission yeast spontaneously generates a number of steady states, including spindles, nematics, and asters, highlighting potential mechanisms for self-organisation in filaments

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