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Work published with BioMed Central, Chemistry Central and SpringerOpen by researchers at DKFZ Heidelberg (Helmholtz Consortium)

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	51.	Methodology article Profile analysis and prediction of tissue-specific CpG island methylation classes Christopher Previti, Oscar Harari, Igor Zwir, Coral del Val BMC Bioinformatics 2009, 10:116 (21 April 2009) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	52.	Research Late treatment with imatinib mesylate ameliorates radiation-induced lung fibrosis in a mouse model Minglun Li, Amir Abdollahi, Hermann-Josef Gröne, Kenneth E Lipson, Claus Belka, Peter E Huber Radiation Oncology 2009, 4:66 (21 December 2009) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	53.	Research Organ-, inflammation- and cancer specific transcriptional fingerprints of pancreatic and hepatic stellate cells Mert Erkan, Nadine Weis, Zheng Pan, Christian Schwager, Tamar Samkharadze, Xiaohua Jiang, Ute Wirkner, Nathalia A Giese, Wilhelm Ansorge, Jürgen Debus, Peter E Huber, Helmut Friess, Amir Abdollahi, Jörg Kleeff Molecular Cancer 2010, 9:88 (23 April 2010) Abstract \| Full text \| PDF \| PubMed
	54.	Research Krüppel-like zinc finger proteins in end-stage COPD lungs with and without severe alpha1-antitrypsin deficiency A-Rembert Koczulla, Danny Jonigk, Thomas Wolf, Christian Herr, Sarah Noeske, Walter Klepetko, Claus Vogelmeier, Nils von Neuhoff, Johanna Rische, Sabine Wrenger, Heiko Golpon, Robert Voswinckel, Maurizio Luisetti, Ilaria Ferrarotti, Tobias Welte, Sabina Janciauskiene Orphanet Journal of Rare Diseases 2012, 7:29 (23 May 2012) Abstract \| Full text \| PDF \| PubMed
	55.	Methodology Intensity modulated radiotherapy (IMRT) in the treatment of children and Adolescents - a single institution's experience and a review of the literature Florian Sterzing, Eva M Stoiber, Simeon Nill, Harald Bauer, Peter Huber, Jürgen Debus, Marc W Münter Radiation Oncology 2009, 4:37 (23 September 2009) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	56.	Research Identification of stable endogenous control genes for transcriptional profiling of photon, proton and carbon-ion irradiated cells Geeta D Sharungbam, Christian Schwager, Sara Chiblak, Stephan Brons, Lynn Hlatky, Thomas Haberer, Jürgen Debus, Amir Abdollahi Radiation Oncology 2012, 7:70 (17 May 2012) Abstract \| Full text \| PDF \| PubMed
	57.	Technical Note SNP_tools: A compact tool package for analysis and conversion of genotype data for MS-Excel Bowang Chen, Stefan Wilkening, Marion Drechsel, Kari Hemminki BMC Research Notes 2009, 2:214 (23 October 2009) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	58.	Research article Presence of papillomavirus sequences in condylomatous lesions of the mamillae and in invasive carcinoma of the breast Ethel-Michele de Villiers, Robert E Sandstrom, Harald zur Hausen, Charles E Buck Breast Cancer Res 2005, 7:R1-R11 (22 October 2004) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| 1 comment
	59.	Research *Investigation of tumor hypoxia using a two-enzyme system for in vitro* generation of oxygen deficiency** Vasileios Askoxylakis, Gunda Millonig, Ute Wirkner, Christian Schwager, Shoaib Rana, Annette Altmann, Uwe Haberkorn, Jürgen Debus, Sebastian Mueller, Peter E Huber Radiation Oncology 2011, 6:35 (10 April 2011) Abstract \| Full text \| PDF \| PubMed
	60.	Research *An integrated gene annotation and transcriptional profiling approach towards the full gene content of the Drosophila* genome** M Hild, B Beckmann, SA Haas, B Koch, V Solovyev, C Busold, K Fellenberg, M Boutros, M Vingron, F Sauer, JD Hoheisel, R Paro Genome Biology 2003, 5:R3 (22 December 2003) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary A novel Drosophila microarray constructed on the basis of an integrated in silico/wet biology approach provides evidence for the transcription of approximately 2,600 additional genes. Validation indicates a lower limit of 2,000 novel annotations, thus raising the number of genes that make a fly.
	61.	Research Correction of patient positioning errors based on in-line cone beam CTs: clinical implementation and first experiences Christoph Thilmann, Simeon Nill, Thomas Tücking, Angelika Höss, Bernd Hesse, Lars Dietrich, Rolf Bendl, Bernhard Rhein, Peter Häring, Christian Thieke, Uwe Oelfke, Juergen Debus, Peter Huber Radiation Oncology 2006, 1:16 (24 May 2006) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	62.	Research Polymorphisms within inflammatory genes and colorectal cancer Stefano Landi, Federica Gemignani, Fabio Bottari, Lydie Gioia-Patricola, Elisabet Guino, María Cambray, Sebastiano Biondo, Gabriel Capella, Laura Boldrini, Federico Canzian, Victor Moreno Journal of Negative Results in BioMedicine 2006, 5:15 (24 October 2006) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	63.	Research Intensity modulated radiotherapy (IMRT) in benign giant cell tumors -- a single institution case series and a short review of the literature Falk Roeder, Carmen Timke, Felix Zwicker, Christian Thieke, Marc Bischof, Jürgen Debus, Peter E Huber Radiation Oncology 2010, 5:18 (26 February 2010) Abstract \| Full text \| PDF \| PubMed
	64.	Research article A novel multiplex-protein array for serum diagnostics of colon cancer: a case–control study Stefanie Bünger, Ulrike Haug, Maria Kelly, Nicole Posorski, Katja Klempt-Giessing, Andrew Cartwright, Stephen P Fitzgerald, Vicki Toner, Damien McAleer, Timo Gemoll, Tilman Laubert, Jürgen Büning, Klaus Fellermann, Hans-Peter Bruch, Uwe J Roblick, Hermann Brenner, Ferdinand von Eggeling, Jens K Habermann BMC Cancer 2012, 12:393 (7 September 2012) Abstract \| Full text \| PDF \| PubMed
	65.	Research article TMPRSS2-ERG -specific transcriptional modulation is associated with prostate cancer biomarkers and TGF-β signaling Jan C Brase, Marc Johannes, Heiko Mannsperger, Maria Fälth, Jennifer Metzger, Lukasz A Kacprzyk, Tatjana Andrasiuk, Stephan Gade, Michael Meister, Hüseyin Sirma, Guido Sauter, Ronald Simon, Thorsten Schlomm, Tim Beißbarth, Ulrike Korf, Ruprecht Kuner, Holger Sültmann BMC Cancer 2011, 11:507 (5 December 2011) Abstract \| Full text \| PDF \| PubMed
	66.	Research article Microarray-based approach identifies microRNAs and their target functional patterns in polycystic kidney disease Priyanka Pandey, Benedikt Brors, Prashant K Srivastava, Andrea Bott, Susanne NE Boehn, Herrmann-Josef Groene, Norbert Gretz BMC Genomics 2008, 9:624 (23 December 2008) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	67.	Research article Vitamin D receptor gene polymorphisms and haplotypes and postmenopausal breast cancer risk Sascha Abbas, Alexandra Nieters, Jakob Linseisen, Tracy Slanger, Silke Kropp, Elke Mutschelknauss, Dieter Flesch-Janys, Jenny Chang-Claude Breast Cancer Research 2008, 10:R31 (17 April 2008) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary A large case-control study found no association between vitamin D receptor polymorphisms and overall breast cancer risk, but the TaqI polymorphism was associated with a significantly increased risk of estrogen-receptor positive breast cancer.
	68.	Methodology article The full-ORF clone resource of the German cDNA Consortium Stephanie Bechtel, Heiko Rosenfelder, Anny Duda, Christian Schmidt, Ute Ernst, Ruth Wellenreuther, Alexander Mehrle, Claudia Schuster, Andre Bahr, Helmut Blöcker, Dagmar Heubner, Andreas Hoerlein, Guenter Michel, Holger Wedler, Karl Köhrer, Birgit Ottenwälder, Annemarie Poustka, Stefan Wiemann, Ingo Schupp BMC Genomics 2007, 8:399 (31 October 2007) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	69.	Research Carcinogen metabolism, cigarette smoking, and breast cancer risk: a Bayes model averaging approach Nadine Stephenson, Lars Beckmann, Jenny Chang-Claude Epidemiologic Perspectives & Innovations 2010, 7:10 (16 November 2010) Abstract \| Full text \| PDF \| PubMed
	70.	Research article Inducible gene inactivation in neurons of the adult mouse forebrain Gitta Erdmann, Günther Schütz, Stefan Berger BMC Neuroscience 2007, 8:63 (2 August 2007) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	71.	Research article Analyzing the regulation of metabolic pathways in human breast cancer Gunnar Schramm, Eva-Maria Surmann, Stefan Wiesberg, Marcus Oswald, Gerhard Reinelt, Roland Eils, Rainer König BMC Medical Genomics 2010, 3:39 (10 September 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	72.	Research Ubiquitin carboxyl-terminal hydrolase 1 (UCHL1) is a potential tumour suppressor in prostate cancer and is frequently silenced by promoter methylation Ramesh Ummanni, Edgar Jost, Melanie Braig, Frithjof Lohmann, Frederike Mundt, Christine Barett, Thorsten Schlomm, Guido Sauter, Tina Senff, Carsten Bokemeyer, Holger Sültmann, Catherine Meyer-Schwesinger, Tim H Brümmendorf, Stefan Balabanov Molecular Cancer 2011, 10:129 (14 October 2011) Abstract \| Full text \| PDF \| PubMed
	73.	Short report Targeting AMP-activated protein kinase in adipocytes to modulate obesity-related adipokine production associated with insulin resistance and breast cancer cell proliferation Jean Grisouard, Kaethi Dembinski, Doris Mayer, Ulrich Keller, Beat Müller, Mirjam Christ-Crain Diabetology & Metabolic Syndrome 2011, 3:16 (20 July 2011) Abstract \| Full text \| PDF \| PubMed
	74.	Research IGRT versus non-IGRT for postoperative head-and-neck IMRT patients: dosimetric consequences arising from a PTV margin reduction Michael Schwarz, Kristina Giske, Armin Stoll, Simeon Nill, Peter E Huber, Jürgen Debus, Rolf Bendl, Eva M Stoiber Radiation Oncology 2012, 7:133 (8 August 2012) Abstract \| Full text \| PDF \| PubMed
	75.	Research article Loss of aquaporin-4 expression and putative function in non-small cell lung cancer Arne Warth, Thomas Muley, Michael Meister, Esther Herpel, Anita Pathil, Hans Hoffmann, Philipp A Schnabel, Christian Bender, Andreas Buness, Peter Schirmacher, Ruprecht Kuner BMC Cancer 2011, 11:161 (6 May 2011) Abstract \| Full text \| PDF \| PubMed