1.
Reintroductions and genetic introgression from domestic pigs have shaped the genetic population structure of Northwest European wild boar
Daniel
J
Goedbloed,
Pim
van Hooft,
Hendrik-Jan
Megens,
Katharina
Langenbeck,
Walburga
Lutz,
Richard
PMA
Crooijmans,
Sip
E
van Wieren,
Ron
C
Ydenberg,
Herbert
HT
Prins
BMC Genetics 2013, 14 :43 (20 May 2013)
Abstract | Provisional PDF
2.
What is the influence on water quality in temperate eutrophic lakes of a reduction of planktivorous and benthivorous fish? A systematic review protocol
Claes
Bernes,
Stephen
R
Carpenter,
Anna
Gårdmark,
Per
Larsson,
Lennart
Persson,
Christian
Skov,
Ellen
Van Donk
Environmental Evidence 2013, 2 :9 (10 May 2013)
Abstract | Full text | PDF
3.
Adapting the SLIM diabetes prevention intervention to a Dutch real-life setting: joint decision making by science and practice
Sophia
C
Jansen,
Annemien
Haveman-Nies,
Geerke
Duijzer,
Josien
Ter Beek,
Gerrit
J
Hiddink,
Edith
JM
Feskens
BMC Public Health 2013, 13 :457 (8 May 2013)
Abstract | Full text | PDF | PubMed
4.
An efficient flat-surface collar-free grafting method for Arabidopsis thaliana seedlings
Nayelli
Marsch Martínez,
John
Franken,
Karla
L
Gonzalez-Aguilera,
Stefan
de Folter,
Gerco
Angenent,
Elena
R
Alvarez-Buylla
Plant Methods 2013, 9 :14 (4 May 2013)
Abstract | Provisional PDF
| PubMed
|
Editor’s summary
Grafting is an extremely important technique for the study of long distance signalling in plants. The authors describe substantial improvements to existing methodologies that both increase the success rate and the throughput of hypocotyl grafting in Arabidopsis.
5.
Transcription networks responsible for early regulation of Salmonella -induced inflammation in the jejunum of pigs
Marcel
Hulst,
Mari
Smits,
Stéphanie
Vastenhouw,
Agnes
de Wit,
Theo
Niewold,
Jan
van der Meulen
Journal of Inflammation 2013, 10 :18 (17 April 2013)
Abstract | Full text | PDF | PubMed
6.
Consumers’ intention to use health recommendation systems to receive personalized nutrition advice
Sonja
Wendel,
Benedict
GC
Dellaert,
Amber
Ronteltap,
Hans
CM
van Trijp
BMC Health Services Research 2013, 13 :126 (4 April 2013)
Abstract | Full text | PDF | PubMed
7.
MGcV: the microbial genomic context viewer for comparative genome analysis
Lex
Overmars,
Robert
Kerkhoven,
Roland
J
Siezen,
Christof
Francke
BMC Genomics 2013, 14 :209 (1 April 2013)
Abstract | Full text | PDF | PubMed
8.
Gene Ontology consistent protein function prediction: the FALCON algorithm applied to six eukaryotic genomes
Yiannis
AI
Kourmpetis,
Aalt
DJ
van Dijk,
Cajo
JF
ter Braak
Algorithms for Molecular Biology 2013, 8 :10 (27 March 2013)
Abstract | Provisional PDF
| PubMed
9.
Genotype-phenotype matching analysis of 38 Lactococcus lactis strains using random forest methods
Jumamurat
R
Bayjanov,
Marjo
JC
Starrenburg,
Marijke
R
van der Sijde,
Roland
J
Siezen,
Sacha
AFT
van Hijum
BMC Microbiology 2013, 13 :68 (26 March 2013)
Abstract | Full text | PDF | PubMed
10.
A qRT-PCR assay for the expression of all Mal d 1 isoallergen genes
Giulia
Pagliarani,
Roberta
Paris,
Paul
Arens,
Stefano
Tartarini,
Giampaolo
Ricci,
Marinus
MJ
Smulders,
W Eric
van de Weg
BMC Plant Biology 2013, 13 :51 (23 March 2013)
Abstract | Full text | PDF | PubMed |
11.
Dissecting structural and nucleotide genome-wide variation in inbred Iberian pigs
Anna
Esteve-Codina,
Yogesh
Paudel,
Luca
Ferretti,
Emanuele
Raineri,
Hendrik-Jan
Megens,
Luis
Silió,
María
C
Rodríguez,
Martein
AM
Groenen,
Sebastian
E
Ramos-Onsins,
Miguel
Pérez-Enciso
BMC Genomics 2013, 14 :148 (5 March 2013)
Abstract | Full text | PDF | PubMed
12.
Rationale and design of a randomized controlled trial of the effect of retinol and vitamin D supplementation on treatment in active pulmonary tuberculosis patients with diabetes
Qiuzhen
Wang,
Aiguo
Ma,
Ib Christian
Bygbjerg,
Xiuxia
Han,
Yufeng
Liu,
Shanliang
Zhao,
Jing
Cai
BMC Infectious Diseases 2013, 13 :104 (26 February 2013)
Abstract | Full text | PDF | PubMed
13.
MITEs in the promoters of effector genes allow prediction of novel virulence genes in Fusarium oxysporum
Sarah
M
Schmidt,
Petra
M
Houterman,
Ines
Schreiver,
Lisong
Ma,
Stefan
Amyotte,
Biju
Chellappan,
Sjef
Boeren,
Frank L W
Takken,
Martijn
Rep
BMC Genomics 2013, 14 :119 (22 February 2013)
Abstract | Full text | PDF | PubMed
14.
Predicting the evolution of antibiotic resistance
Martijn
F
Schenk,
J Arjan
GM
de Visser
BMC Biology 2013, 11 :14 (22 February 2013)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
Commenting on research in BMC Evolutionary Biology , Arjan de Visser and Martijn Schenk discuss how two genetic properties, pleiotropy and epistasis, might help us to predict the evolution of antibiotic resistance.
15.
Fast probabilistic file fingerprinting for big data
Konstantin
Tretyakov,
Sven
Laur,
Geert
Smant,
Jaak
Vilo,
Pjotr
Prins
BMC Genomics 2013, 14 (Suppl 2):S8 (15 February 2013)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
16.
The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies
Toshiaki
Katayama,
Mark
D
Wilkinson,
Gos
Micklem,
Shuichi
Kawashima,
Atsuko
Yamaguchi,
Mitsuteru
Nakao,
Yasunori
Yamamoto,
Shinobu
Okamoto,
Kenta
Oouchida,
Hong-Woo
Chun,
Jan
Aerts,
Hammad
Afzal,
Erick
Antezana,
Kazuharu
Arakawa,
Bruno
Aranda,
Francois
Belleau,
Jerven
Bolleman,
Raoul JP
Bonnal,
Brad
Chapman,
Peter JA
Cock,
Tore
Eriksson,
Paul MK
Gordon,
Naohisa
Goto,
Kazuhiro
Hayashi,
Heiko
Horn,
Ryosuke
Ishiwata,
Eli
Kaminuma,
Arek
Kasprzyk,
Hideya
Kawaji,
Nobuhiro
Kido
et al.
Journal of Biomedical Semantics 2013, 4 :6 (11 February 2013)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
This meeting report from the 3rd DBCLS BioHackathon examines how Semantic Web technologies can improve the quality and accessibility of life science research data on the Web.
17.
Genome-wide gene expression analysis of anguillid herpesvirus 1
Steven J van
Beurden,
Ben
PH
Peeters,
Peter
JM
Rottier,
Andrew
J
Davison,
Marc
Y
Engelsma
BMC Genomics 2013, 14 :83 (6 February 2013)
Abstract | Full text | PDF | PubMed
18.
Next-generation text-mining mediated generation of chemical response-specific gene sets for interpretation of gene expression data
Kristina
M
Hettne,
André
Boorsma,
Dorien A
M
van Dartel,
Jelle
J
Goeman,
Esther
de Jong,
Aldert
H
Piersma,
Rob
H
Stierum,
Jos
C
Kleinjans,
Jan
A
Kors
BMC Medical Genomics 2013, 6 :2 (29 January 2013)
Abstract | Full text | PDF | PubMed
19.
Geographic parthenogenesis and plant-enemy interactions in the common dandelion
Koen
JF
Verhoeven,
Arjen
Biere
BMC Evolutionary Biology 2013, 13 :23 (28 January 2013)
Abstract | Full text | PDF | PubMed
20.
Microarray analysis reveals marked intestinal microbiota aberrancy in infants having eczema compared to healthy children in at-risk for atopic disease
Lotta
Nylund,
Reetta
Satokari,
Janne
Nikkilä,
Mirjana
Rajilić-Stojanović,
Marko
Kalliomäki,
Erika
Isolauri,
Seppo
Salminen,
Willem
M
de Vos
BMC Microbiology 2013, 13 :12 (23 January 2013)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
Children with eczema harbour a greater diversity of microbes in the gut than those without, including an increased abundance of bacteria that are typically more common in adults, which may contribute to the perpetuation of the condition.
21.
Geographic coincidence of increased malaria transmission hazard and vulnerability occurring at the periphery of two Tanzanian villages
Tanya
L
Russell,
Dickson
W
Lwetoijera,
Bart
GJ
Knols,
Willem
Takken,
Gerry
F
Killeen,
Louise
A
Kelly-Hope
Malaria Journal 2013, 12 :24 (18 January 2013)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
Malaria elimination necessitates an improved understanding of fine-scale geographic variations in transmission risk so that complementary vector control tools can be integrated into control programmes.
22.
Systemic distribution of different low pathogenic avian influenza (LPAI) viruses in chicken
Jacob
Post,
Eveline
D
de Geus,
Lonneke
Vervelde,
Jan BWJ
Cornelissen,
Johanna
MJ
Rebel
Virology Journal 2013, 10 :23 (17 January 2013)
Abstract | Full text | PDF | PubMed
23.
RNA-Seq analysis reveals new gene models and alternative splicing in the fungal pathogen Fusarium graminearum
Chunzhao
Zhao,
Cees
Waalwijk,
Pierre J G M
de Wit,
Dingzhong
Tang,
Theo
van der Lee
BMC Genomics 2013, 14 :21 (16 January 2013)
Abstract | Full text | PDF | PubMed
24.
Anemia in relation to body mass index and waist circumference among chinese women
Yu
Qin,
Alida
Melse-Boonstra,
Xiaoqun
Pan,
Baojun
Yuan,
Yue
Dai,
Jinkou
Zhao,
Michael
B
Zimmermann,
Frans
J
Kok,
Minghao
Zhou,
Zumin
Shi
Nutrition Journal 2013, 12 :10 (11 January 2013)
Abstract | Full text | PDF | PubMed
25.
Association between transmission rate and disease severity for Actinobacillus pleuropneumoniae infection in pigs
Tijs
J
Tobias,
Annemarie
Bouma,
Angeline
JJM
Daemen,
Jaap
A
Wagenaar,
Arjan
Stegeman,
Don
Klinkenberg
Veterinary Research 2013, 44 :2 (11 January 2013)
Abstract | Full text | PDF | PubMed