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1.

Methodology article   Open Access

Accurate indel prediction using paired-end short reads

Dominik Grimm, Jörg Hagmann, Daniel Koenig, Detlef Weigel, Karsten Borgwardt BMC Genomics 2013, 14:132 (27 February 2013)

Abstract | Provisional PDF | PubMed

2.

Research article   Open Access

Phylogenetic patterns of emergence of new genes support a model of frequent de novo evolution

Rafik Neme, Diethard Tautz BMC Genomics 2013, 14:117 (21 February 2013)

Abstract | Provisional PDF | PubMed

3.

Poster presentation   Open Access

Migraine without aura: genome-wide association analysis identifies several novel susceptibility

B De Vries, T Freilinger, V Anttila, R Malik, GM Terwindt, P Pozo-Rosich, B Winsvold, D Nyholt, WPJ van Oosterhout, V Artto, M Todt, E Hämäläinen, J Fernandez-Moralez, M Louter, MA Kaunisto, J Schoenen, O Raitakari, T Lehtimäki, M Ville-Pueyo, H Göbel, E Wichman, C Sintas, A Uitterlinden, A Hofman, F Rivadeneira, A Heinze, E Tronvik, CM van Duin, J Kaprio, B Cormand, M Wessman, RR Frants, T Meitinger, B Müller-Myhsok, JA Zwart, M Färkkilä, A Macaya, MD Ferrari, C Kubisch, A Palotie, M Dichgans, AMJ van den Maagdenberg et al. The Journal of Headache and Pain 2013, $article.volume.volumeNumber(Suppl 1):P21 (21 February 2013)

Full text | PDF

4.

Poster presentation   Open Access

Migraine without aura: genome-wide association analysis identifies several novel susceptibility

Boukje de Vries, Tobias Freilinger, Verneri Anttila, Rainer Malik, Mikko Kallela, Gisela M Terwindt, Patricia Pozo-Rosich, Bendik Winsvold, Dale R Nyholt, Willebrordus PJ van Oosterhout, Ville Artto, Unda Todt, Eija Hämäläinen, Jèssica Fernández-Morales, Mark A Louter, Mari A Kaunisto, Jean Schoenen, Olli Raitakari, Terho Lehtimäki, Marta Vila-Pueyo, Hartmut Göbel, Erich Wichmann, Cèlia Sintas, Andre G Uitterlinden, Albert Hofman, Fernando Rivadeneira, Axel Heinze, Erling Tronvik, Cornelia M van Duijn, Jaakko Kaprio, Bru Cormand, Maija Wessman, Rune R Frants, Thomas Meitinger, Bertram Müller-Myhsok, John-Anker Zwart, Markus Färkkilä, Alfons Macaya, Michel D Ferrari, Christian Kubisch, Aarno Palotie, Martin Dichgans, Arn MJM van den Maagdenberg, et al. The Journal of Headache and Pain 2013, $article.volume.volumeNumber(Suppl 1):P18 (21 February 2013)

Full text | PDF

5.

Research   Open Access

Life-history and hormonal control of aggression in black redstarts: Blocking testosterone does not decrease territorial aggression, but changes the emphasis of vocal behaviours during simulated territorial intrusions

Beate Apfelbeck, Kim G Mortega, Sarah Kiefer, Silke Kipper, Wolfgang Goymann Frontiers in Zoology 2013, 10:8 (21 February 2013)

Abstract | Provisional PDF | PubMed

6.

Research   Open Access

A de novo assembly of the newt transcriptome combined with proteomic validation identifies new protein families expressed during tissue regeneration

Mario Looso, Jens Preussner, Konstantinos Sousounis, Marc Bruckskotten, Christian S Michel, Ettore Lignelli, Richard Reinhardt, Sabrina Hoeffner, Marcus Krueger, Panagiotis A Tsonis, Thilo Borchardt, Thomas Braun Genome Biology 2013, 14:R16 (20 February 2013)

Abstract | Provisional PDF | PubMed |  Editor’s summary

A newt transcriptome, incorporating both undamaged and regenerating organs, reveals new protein families that may be involved in tissue regeneration

7.

Methodology article   Open Access

Optimal precursor ion selection for LC-MALDI MS/MS

Alexandra Zerck, Eckhard Nordhoff, Hans Lehrach, Knut Reinert BMC Bioinformatics 2013, 14:56 (18 February 2013)

Abstract | Provisional PDF | PubMed

8.

Research   Open Access

De novo prediction of the genomic components and capabilities for microbial plant biomass degradation from (meta-)genomes

Aaron Weimann, Yulia Trukhina, Phillip B Pope, Sebastian GA Konietzny, Alice C McHardy Biotechnology for Biofuels 2013, 6:24 (15 February 2013)

Abstract | Full text | PDF | PubMed

9.

Methodology article   Open Access

A new method to customize protein expression vectors for fast, efficient and background free parallel cloning

Judith Scholz, Hüseyin Besir, Claudia Strasser, Sabine Suppmann BMC Biotechnology 2013, 13:12 (14 February 2013)

Abstract | Provisional PDF | PubMed

10.

Research   Open Access Highly Accessed

Hybridization between two cestode species and its consequences for intermediate host range

Tina Henrich, Daniel P Benesh, Martin Kalbe Parasites & Vectors 2013, 6:33 (7 February 2013)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Our study shows that hybridization between two highly host-specific fish parasites - Schistocephalus solidus and S. pungitii - is possible. The hybrids expand their host range and can, unlike their parental species, now infect both fish hosts. Image: Stickleback infected with multiple Schistocephalus plerocercoids.

11.

Research   Open Access Highly Accessed

Case study for the assessment of the biogeophysical effects of a potential afforestation in Europe

Borbála Gálos, Stefan Hagemann, Andreas Hänsler, Georg Kindermann, Diana Rechid, Kevin Sieck, Claas Teichmann, Daniela Jacob Carbon Balance and Management 2013, 8:3 (1 February 2013)

Abstract | Provisional PDF | PubMed |  Editor’s summary

Based atmospheric carbon projections and a climate change model, afforestation may be an effective strategy to mitigate for increases in temperature in Europe. Planting of deciduous forests is predicted to decrease temperatures and increase precipitation across many areas.

12.

Research   Open Access

Dynamics of symbiont-mediated antibiotic production reveal efficient long-term protection for beewolf offspring

Sabrina Koehler, Jan Doubský, Martin Kaltenpoth Frontiers in Zoology 2013, 10:3 (31 January 2013)

Abstract | Provisional PDF | PubMed

13.

Poster presentation   Open Access

High resolution real-time CMR of function and flow: initial clinical results

Joachim Lotz, Jan M Sohns, Michael Steinmetz, Johannes T Kowallick, Christina Schulte, Wieland Staab, Arun Joseph, Klaus-Dietmar Merboldt, Dirk Voit, Shuo Zhang, Martin Uecker, Christina Unterberg-Buchwald, Gerd Hasenfus, Jens Frahm Journal of Cardiovascular Magnetic Resonance 2013, 15(Suppl 1):E99 (30 January 2013)

Full text | PDF

14.

Poster presentation   Open Access

Real-time cardiac phase contrast MRI blood flow including Valsalva and Mueller maneuver. Initial experiences

Jan M Sohns, Christina Unterberg-Buchwald, Johannes T Kowallick, Michael Steinmetz, Christina Schulte, Wieland Staab, Arun Joseph, Klaus-Dietmar Merboldt, Dirk Voit, Shuo Zhang, Martin Uecker, Jens Frahm, Joachim Lotz Journal of Cardiovascular Magnetic Resonance 2013, 15(Suppl 1):E17 (30 January 2013)

Full text | PDF

15.

Research article   Open Access

Localization of sesquiterpene formation and emission in maize leaves after herbivore damage

Tobias G Köllner, Claudia Lenk, Christiane Schnee, Sabrina Köpke, Peter Lindemann, Jonathan Gershenzon, Jörg Degenhardt BMC Plant Biology 2013, 13:15 (30 January 2013)

Abstract | Full text | PDF | PubMed

16.

Research   Open Access

A data infrastructure reference model with applications: towards realization of a ScienceTube vision with a data replication service

Morris Riedel, Peter Wittenburg, Johannes Reetz, Mark van de Sanden, Jedrzej Rybicki, Benedikt von St Vieth, Giuseppe Fiameni, Giacomo Mariani, Alberto Michelini, Claudio Cacciari, Willem Elbers, Daan Broeder, Robert Verkerk, Elena Erastova, Michael Lautenschlaeger, Reinhard Budig, Hannes Thielmann, Peter Coveney, Stefan Zasada, Ali Haidar, Otto Buechner, Cristina Manzano, Shiraz Memon, Shahbaz Memon, Heikki Helin, Jari Suhonen, Damien Lecarpentier, Kimmo Koski, Thomas Lippert Journal of Internet Services and Applications 2013, 4:1 (30 January 2013)

Abstract | Full text | PDF

17.

Research   Open Access

Inhibition of clathrin by pitstop 2 activates the spindle assembly checkpoint and induces cell death in dividing HeLa cancer cells

Charlotte M Smith, Volker Haucke, Adam McCluskey, Phillip J Robinson, Megan Chircop Molecular Cancer 2013, 12:4 (17 January 2013)

Abstract | Full text | PDF | PubMed

18.

Research   Open Access Highly Accessed

Deep transcriptome-sequencing and proteome analysis of the hydrothermal vent annelid Alvinella pompejana identifies the CvP-bias as a robust measure of eukaryotic thermostability

Thomas Holder, Claire Basquin, Judith Ebert, Nadine Randel, Didier Jollivet, Elena Conti, Gáspár Jékely, Fulvia Bono Biology Direct 2013, 8:2 (16 January 2013)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Analysis of a large sequence dataset from the thermotolerant hydrothermal vent annelid Alvinella pompejana identified the CvP-bias as a robust measure of thermostability in eukaryotes.

19.

Study protocol   Open Access

Culture models to study leukocyte trafficking across the choroid plexus

Tobias Tenenbaum, Ulrike Steinmann, Corinna Friedrich, Jürgen Berger, Christian Schwerk, Horst Schroten Fluids and Barriers of the CNS 2013, 10:1 (10 January 2013)

Abstract | Full text | PDF | PubMed

20.

Opinion   Open Access

Texture, taste and aroma: multi-scale materials and the gastrophysics of food

Thomas A Vilgis Flavour 2013, 2:12 (9 January 2013)

Abstract | Full text | PDF

21.

Database   Open Access Highly Accessed

OPTIMAS-DW: A comprehensive transcriptomics, metabolomics, ionomics, proteomics and phenomics data resource for maize

Christian Colmsee, Martin Mascher, Tobias Czauderna, Anja Hartmann, Urte Schlüter, Nina Zellerhoff, Jessica Schmitz, Andrea Bräutigam, Thea R Pick, Philipp Alter, Manfred Gahrtz, Sandra Witt, Alisdair R Fernie, Frederik Börnke, Holger Fahnenstich, Marcel Bucher, Thomas Dresselhaus, Andreas PM Weber, Falk Schreiber, Uwe Scholz, Uwe Sonnewald BMC Plant Biology 2012, 12:245 (29 December 2012)

Abstract | Full text | PDF | PubMed |  Editor’s summary

The OPTIMAS Data Warehouse (OPTIMAS-DW) is a comprehensive collection of data for maize, integrating data from different domains such as transcriptomics, metabolomics, ionomics, proteomics and phenomics, and particularly supports systems biological research

22.

Research   Open Access

Natural variation of H3K27me3 distribution between two Arabidopsis accessions and its association with flanking transposable elements

Xue Dong, Julia Reimer, Ulrike Göbel, Julia Engelhorn, Fei He, Heiko Schoof, Franziska Turck Genome Biology 2012, 13:R117 (19 December 2012)

Abstract | Full text | PDF | PubMed |  Editor’s summary

An analysis of natural variation of H3K27me3 in 2 Arabidopsis thaliana accessions and in their F1 hybrids

23.

Research   Open Access

Total carbon accumulation in a tropical forest landscape

Carlos A. Sierra, Jorge I. del Valle, Hector I. Restrepo Carbon Balance and Management 2012, 7:12 (19 December 2012)

Abstract | Provisional PDF | PubMed

24.

Proceedings   Open Access

From event-labeled gene trees to species trees

Maribel Hernandez-Rosales, Marc Hellmuth, Nicolas Wieseke, Katharina T Huber, Vincent Moulton, Peter F Stadler BMC Bioinformatics 2012, 13(Suppl 19):S6 (19 December 2012)

Abstract | Full text | PDF

25.

Research   Open Access

Longitudinal changes in functional capacity: effects of socio-economic position among ageing adults

Tommi Sulander, Heikki Heinonen, Tuuli Pajunen, Antti Karisto, Pertti Pohjolainen, Mikael Fogelholm International Journal for Equity in Health 2012, 11:78 (15 December 2012)

Abstract | Full text | PDF | PubMed

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