26.
CHANCE: comprehensive software for quality control and validation of ChIP-seq data
Aaron
Diaz,
Abhinav
Nellore,
Jun
S
Song
Genome Biology 2012, 13 :R98 (15 October 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
A user friendly graphical software package with multiple tools for quality assessment of ChIP-seq data
27.
Analysis of inflammation-related nigral degeneration and locomotor function in
DJ-1
−/−
mice
Thi
A
Nguyen,
Tamy
Frank-Cannon,
Terina
N
Martinez,
Kelly
A
Ruhn,
Marian
Marvin,
Bradford
Casey,
Isaac
Treviño,
John
J
Hong,
Matthew
S
Goldberg,
Malú
G
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Journal of Neuroinflammation 2013, 10 :50 (28 April 2013)
Abstract | Full text | PDF | PubMed
28.
Cyclist route choice, traffic-related air pollution, and lung function: a scripted exposure study
Sarah
Jarjour,
Michael
Jerrett,
Dane
Westerdahl,
Audrey
de Nazelle,
Cooper
Hanning,
Laura
Daly,
Jonah
Lipsitt,
John
Balmes
Environmental Health 2013, 12 :14 (7 February 2013)
Abstract | Full text | PDF | PubMed
29.
The use of mobile phones as a data collection tool: A report from a household survey in South Africa
Mark
Tomlinson,
Wesley
Solomon,
Yages
Singh,
Tanya
Doherty,
Mickey
Chopra,
Petrida
Ijumba,
Alexander
C
Tsai,
Debra
Jackson
BMC Medical Informatics and Decision Making 2009, 9 :51 (23 December 2009)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
30.
Epidemiology of breast cancer subtypes in two prospective cohort studies of breast cancer survivors
Marilyn
L
Kwan,
Lawrence
H
Kushi,
Erin
Weltzien,
Benjamin
Maring,
Susan
E
Kutner,
Regan
S
Fulton,
Marion
M
Lee,
Christine
B
Ambrosone,
Bette
J
Caan
Breast Cancer Research 2009, 11 :R31 (22 May 2009)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
31.
What does my patient's coronary artery calcium score mean? Combining information from the coronary artery calcium score with information from conventional risk factors to estimate coronary heart disease risk
Mark
J
Pletcher,
Jeffrey
A
Tice,
Michael
Pignone,
Charles
McCulloch,
Tracy
Q
Callister,
Warren
S
Browner
BMC Medicine 2004, 2 :31 (24 August 2004)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
The addition of standard risk factors to the coronary artery calcium score can affect the clinical assessment of coronary heart disease risks.
32.
Haplotype and isoform specific expression estimation using multi-mapping RNA-seq reads
Ernest
Turro,
Shu-Yi
Su,
Ângela
Gonçalves,
Lachlan
JM
Coin,
Sylvia
Richardson,
Alex
Lewin
Genome Biology 2011, 12 :R13 (10 February 2011)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
A novel method for estimating isoform-specific expression and allelic imbalance in diploid organisms from RNA-seq data
33.
Cerebrospinal fluid neopterin decay characteristics after initiation of antiretroviral therapy
Aylin
Yilmaz,
Constantin
T
Yiannoutsos,
Dietmar
Fuchs,
Richard
W
Price,
Kathryn
Crozier,
Lars
Hagberg,
Serena
Spudich,
Magnus
Gisslén
Journal of Neuroinflammation 2013, 10 :62 (10 May 2013)
Abstract | Full text | PDF | PubMed
34.
Oral health-related cultural beliefs for four racial/ethnic groups: Assessment of the literature
Yogita
Butani,
Jane
A
Weintraub,
Judith
C
Barker
BMC Oral Health 2008, 8 :26 (15 September 2008)
Abstract | Full text | PDF | PubMed
35.
Macrophage imbalance (M1 vs. M2) and upregulation of mast cells in wall of ruptured human cerebral aneurysms: preliminary results
David
Hasan,
Nohra
Chalouhi,
Pascal
Jabbour,
Tomoki
Hashimoto
Journal of Neuroinflammation 2012, 9 :222 (21 September 2012)
Abstract | Full text | PDF | PubMed
36.
The effects of intestinal microbial community structure on disease manifestation in IL-10-/- mice infected with Helicobacter hepaticus
Nabeetha
A
Nagalingam,
Courtney
J
Robinson,
Ingrid
L
Bergin,
Kathryn
A
Eaton,
Gary
B
Huffnagle,
Vincent
B
Young
Microbiome 2013, 1 :15 (10 May 2013)
Abstract | Full text | PDF
37.
Co-expression of HER2 and HER3 receptor tyrosine kinases enhances invasion of breast cells via stimulation of interleukin-8 autocrine secretion
Nicola
Aceto,
Stephan
Duss,
Gwen
MacDonald,
Dominique
S
Meyer,
Tim-C
Roloff,
Nancy
E
Hynes,
Mohamed
Bentires-Alj
Breast Cancer Research 2012, 14 :R131 (12 October 2012)
Abstract | Full text | PDF | PubMed
38.
Active microscope stabilization in three dimensions using image correlation
Ryan
McGorty,
Daichi
Kamiyama,
Bo
Huang
Optical Nanoscopy 2013, 2 :3 (18 April 2013)
Abstract | Full text | PDF
39.
Advocacy spurs innovation: promoting synergy between physical and biomedical sciences
Susan
Samson,
Irene
Acerbi,
Carole
Baas,
Valerie
Weaver,
Hope
Rugo
EPJ Nonlinear Biomedical Physics 2013, 1 :1 (9 May 2013)
Abstract | Full text | PDF
40.
Society for Cardiovascular Magnetic Resonance guidelines for reporting cardiovascular magnetic resonance examinations
W Gregory
Hundley,
David
Bluemke,
Jan
G
Bogaert,
Matthias
G
Friedrich,
Charles
B
Higgins,
Mark
A
Lawson,
Michael
V
McConnell,
Subha
V
Raman,
Albert
C
van Rossum,
Scott
Flamm,
Christopher
M
Kramer,
Eike
Nagel,
Stefan
Neubauer
Journal of Cardiovascular Magnetic Resonance 2009, 11 :5 (3 March 2009)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
41.
The effect of depression symptoms and social support on black-white differences in health-related quality of life in early pregnancy: the health status in pregnancy (HIP) study
Li
Liu,
Rosanna
Setse,
Ruby
Grogan,
Neil
R
Powe,
Wanda
K
Nicholson
BMC Pregnancy and Childbirth 2013, 13 :125 (3 June 2013)
Abstract | Full text | PDF | PubMed
42.
clusterMaker: a multi-algorithm clustering plugin for Cytoscape
John
H
Morris,
Leonard
Apeltsin,
Aaron
M
Newman,
Jan
Baumbach,
Tobias
Wittkop,
Gang
Su,
Gary
D
Bader,
Thomas
E
Ferrin
BMC Bioinformatics 2011, 12 :436 (9 November 2011)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
43.
Measuring infertility in populations: constructing a standard definition for use with demographic and reproductive health surveys
Maya
N
Mascarenhas,
Hoiwan
Cheung,
Colin
D
Mathers,
Gretchen
A
Stevens
Population Health Metrics 2012, 10 :17 (31 August 2012)
Abstract | Full text | PDF | PubMed
44.
Social determinants of health and seasonal influenza vaccination in adults ≥65 years: a systematic review of qualitative and quantitative data
Jason
M
Nagata,
Isabel
Hernández-Ramos,
Anand
Kurup,
Daniel
Albrecht,
Claudia
Vivas-Torrealba,
Carlos
Franco-Paredes
BMC Public Health 2013, 13 :388 (25 April 2013)
Abstract | Full text | PDF | PubMed
45.
Potential for false positive HIV test results with the serial rapid HIV testing algorithm
Steven
Baveewo,
Moses
R
Kamya,
Harriet
Mayanja-Kizza,
Robin
Fatch,
David
R
Bangsberg,
Thomas
Coates,
Judith
A
Hahn,
Rhoda
K
Wanyenze
BMC Research Notes 2012, 5 :154 (19 March 2012)
Abstract | Full text | PDF | PubMed
46.
Chromatin accessibility reveals insights into androgen receptor activation and transcriptional specificity
Alok
K
Tewari,
Galip
Yardimci,
Yoichiro
Shibata,
Nathan
C
Sheffield,
Lingyun
Song,
Barry
S
Taylor,
Stoyan
G
Georgiev,
Gerhard
A
Coetzee,
Uwe
Ohler,
Terrence
S
Furey,
Gregory
E
Crawford,
Phillip
G
Febbo
Genome Biology 2012, 13 :R88 (3 October 2012)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
Androgen receptor binding to the genome occurs by multiple mechanisms and is associated with an increase in chromatin accessibility
47.
The Ramachandran plots of glycine and pre-proline
Bosco
K
Ho,
Robert
Brasseur
BMC Structural Biology 2005, 5 :14 (16 August 2005)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
48.
Impact of hormone receptor status on patterns of recurrence and clinical outcomes among patients with human epidermal growth factor-2-positive breast cancer in the National Comprehensive Cancer Network: a prospective cohort study
Ines
Vaz-Luis,
Rebecca
A
Ottesen,
Melissa
E
Hughes,
P Kelly
Marcom,
Beverly
Moy,
Hope
S
Rugo,
Richard
L
Theriault,
John
Wilson,
Joyce
C
Niland,
Jane
C
Weeks,
Nancy
U
Lin
Breast Cancer Research 2012, 14 :R129 (1 October 2012)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central
|
Editor’s summary
Clinical outcomes and patterns of recurrence differ by hormone receptor (HR) status in patients with human epidermal growth factor-2 (HER2)- positive breast cancer, meriting further investigation and consideration in trial design.
49.
Temporal and spatial requirements of Smoothened in ventral midbrain neuronal development
Mianzhi
Tang,
Sarah
X
Luo,
Vivian
Tang,
Eric
J
Huang
Neural Development 2013, 8 :8 (26 April 2013)
Abstract | Full text | PDF | PubMed
50.
Encountering abuse in health care; lifetime experiences in postnatal women - a qualitative study
Anne-Mette
Schroll,
Hanne
Kjærgaard,
Julie
Midtgaard
BMC Pregnancy and Childbirth 2013, 13 :74 (22 March 2013)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
Women who previously experienced abuse in healthcare find constructive ways to manage the experience during pregnancy and childbirth, suggesting that healthcare professionals have a unique opportunity to support the reproductive health of these women.