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Member - Albert-Ludwigs-Universität Freiburg

Albert-Ludwigs-Universität Freiburg Founded in 1457, the Albert Ludwigs University Freiburg is one of the oldest German universities and is now among the nation's leading research and teaching institutions.

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Published articles in BioMed Central and Chemistry Central journals, as well as in SpringerOpen will be paid by the Open Access Publication Fund of the Albert Ludwigs University Freiburg.
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Work published with BioMed Central, Chemistry Central and SpringerOpen by researchers at Albert-Ludwigs-Universität Freiburg

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151.

Research article   Open Access Highly Accessed

Modeling system states in liver cells: Survival, apoptosis and their modifications in response to viral infection

Nicole Philippi, Dorothee Walter, Rebekka Schlatter, Karine Ferreira, Michael Ederer, Oliver Sawodny, Jens Timmer, Christoph Borner, Thomas Dandekar BMC Systems Biology 2009, 3:97 (22 September 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

A Boolean network model for liver cells has four stable system states, two for survival and two for apoptosis, and is validated by successful predictions of the outcome of viral infection and varying growth substrate signals in the presence of FasL.

152.

Research   Open Access Highly Accessed

DCE-MRI assessment of the effect of vandetanib on tumor vasculature in patients with advanced colorectal cancer and liver metastases: a randomized phase I study

Klaus Mross, Ulrike Fasol, Annette Frost, Robin Benkelmann, Jan Kuhlmann, Martin Büchert, Clemens Unger, Hubert Blum, Jürgen Hennig, Tsveta P Milenkova, Jean Tessier, Annetta D Krebs, Anderson J Ryan, Richard Fischer Journal of Angiogenesis Research 2009, 1:5 (21 September 2009)

Abstract | Full text | PDF | PubMed

153.

Poster presentation   Open Access

A model of free monkey scribbling based on the propagation of cell assembly activity

Alexander Hanuschkin, J Michael Herrmann, Abigail Morrison, Markus Diesmann BMC Neuroscience 2009, 10(Suppl 1):P300 (13 July 2009)

Full text | PDF

154.

Poster presentation   Open Access

Reservoir computing methods for functional identification of biological networks

Tayfun Gürelu, Stefan Rotter, Ulrich Egert BMC Neuroscience 2009, 10(Suppl 1):P293 (13 July 2009)

Full text | PDF

155.

Poster presentation   Open Access

Finite synaptic potentials cause a non-linear instantaneous response of the integrate-and-fire model

Moritz Helias, Moritz Deger, Markus Diesmann, Stefan Rotter BMC Neuroscience 2009, 10(Suppl 1):P225 (13 July 2009)

Full text | PDF

156.

Poster presentation   Open Access

Impaired structural plasticity increases connectivity in developing cortical networks

Samora Okujeni, Steffen Kandler, Oliver Weihberger, Ulrich Egert BMC Neuroscience 2009, 10(Suppl 1):P208 (13 July 2009)

Full text | PDF

157.

Poster presentation   Open Access

Dynamics of non-linear cortico-cortical interactions during motion integration in early visual cortex: a spiking neural network model of an optical imaging study in the awake monkey

Jens Kremkow, Laurent Perrinet, Alexandre Reynaud, Ad Aertsen, Guillaume S Masson, Frederic Chavane BMC Neuroscience 2009, 10(Suppl 1):P176 (13 July 2009)

Full text | PDF

158.

Poster presentation   Open Access

The computational role of the feedforward inhibition in the striatum network

Man Yim, Arvind Kumar, Ad Aertsen BMC Neuroscience 2009, 10(Suppl 1):P163 (13 July 2009)

Full text | PDF

159.

Poster presentation   Open Access

Dynamical emergence of fear and extinction cells in the amygdala – a computational model

Ioannis Vlachos, Arvind Kumar, Andreas Lüthi, Ad Aertsen BMC Neuroscience 2009, 10(Suppl 1):P142 (13 July 2009)

Full text | PDF

160.

Poster presentation   Open Access

The Poisson process with dead time captures important statistical features of neural activity

Moritz Deger, Stefano Cardanobile, Moritz Helias, Stefan Rotter BMC Neuroscience 2009, 10(Suppl 1):P110 (13 July 2009)

Full text | PDF

161.

Poster presentation   Open Access

Higher-order correlations in non-stationary parallel spike trains: statistical modeling and inference

Benjamin Staude, Stefan Rotter BMC Neuroscience 2009, 10(Suppl 1):P108 (13 July 2009)

Full text | PDF

162.

Oral presentation   Open Access

Control of the temporal interplay between excitation and inhibition by the statistics of visual input

Jens Kremkow, Laurent Perrinet, Cyril Monier, Yves Frégnac, Guillaume S Masson, Ad Aertsen BMC Neuroscience 2009, 10(Suppl 1):O21 (13 July 2009)

Full text | PDF

163.

Research article   Open Access Highly Accessed

The evolution of nuclear auxin signalling

Ivan A Paponov, William Teale, Daniel Lang, Martina Paponov, Ralf Reski, Stefan A Rensing, Klaus Palme BMC Evolutionary Biology 2009, 9:126 (3 June 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

164.

Research article   Open Access Highly Accessed

Radical loss of an extreme extra-pair mating system

Sjouke A Kingma, Michelle L Hall, Gernot Segelbacher, Anne Peters BMC Ecology 2009, 9:15 (19 May 2009)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Extra-pair paternity is common in Australian fairy wrens, but one species, the purple-crowned fairy wren, is surprisingly faithful despite sharing life history parameters with other birds in this genus, suggesting that minor inter-specific differences can cause radical shifts in behavior.

165.

Correspondence   Open Access

Survey-based naming conventions for use in OBO Foundry ontology development

Daniel Schober, Barry Smith, Suzanna E Lewis, Waclaw Kusnierczyk, Jane Lomax, Chris Mungall, Chris F Taylor, Philippe Rocca-Serra, Susanna-Assunta Sansone BMC Bioinformatics 2009, 10:125 (27 April 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

166.

Research article   Open Access

Genetic variants of the promoter of the heme oxygenase-1 gene and their influence on cardiovascular disease (The Ludwigshafen Risk and Cardiovascular Health Study)

Nicola Lüblinghoff, Karl Winkler, Bernhard R Winkelmann, Ursula Seelhorst, Britta Wellnitz, Bernhard O Boehm, Winfried März, Michael M Hoffmann BMC Medical Genetics 2009, 10:36 (23 April 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

167.

Research   Open Access

In vitro activity of pyronaridine against Plasmodium falciparum and comparative evaluation of anti-malarial drug susceptibility assays

Florian Kurth, Peter Pongratz, Sabine Bélard, Benjamin Mordmüller, Peter G Kremsner, Michael Ramharter Malaria Journal 2009, 8:79 (23 April 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

A paper describing the activity of pyronaridine in clinical isolates of P. falciparum in Gabon. Pyronaridine is highly active in chloroquine-resistant parasites and seems a promising partner drug for artemisinin-based combination therapy

168.

Research article   Open Access

Indications for computed tomography (CT-) diagnostics in proximal humeral fractures: a comparative study of plain radiography and computed tomography

Christian Bahrs, Bernd Rolauffs, Norbert P Südkamp, Hagen Schmal, Christoph Eingartner, Klaus Dietz, Philippe L Pereira, Kuno Weise, Erich Lingenfelter, Peter Helwig BMC Musculoskeletal Disorders 2009, 10:33 (2 April 2009)

Abstract | Full text | PDF | PubMed

169.

Research article   Open Access Highly Accessed

Biocomputational prediction of non-coding RNAs in model cyanobacteria

Björn Voß, Jens Georg, Verena Schön, Susanne Ude, Wolfgang R Hess BMC Genomics 2009, 10:123 (23 March 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

New conserved non-coding RNA (ncRNAs) in four species of cyanobacteria have been validated, opening the way for a less stringent comparative analysis with experimental support to discover even more previously unidentified elements.

170.

Meeting abstract   Open Access

TLR2 and TLR4 signaling in macrophages is negatively regulated by a Lyn-PI3K module and promoted by SHIP1

S Keck, MA Freudenberg, M Huber Cell Communication and Signaling 2009, 7(Suppl 1):A78 (26 February 2009)

Full text | PDF

171.

Research   Open Access Highly Accessed

Expiratory automatic endotracheal tube compensation reduces dynamic hyperinflation in a physical lung model

Christoph Haberthür, Annekathrin Mehlig, John F Stover, Stefan Schumann, Knut Möller, Hans-Joachim Priebe, Josef Guttmann Critical Care 2009, 13:R4 (23 January 2009)

Abstract | Full text | PDF | PubMed

172.

Correction   Open Access

Chromosomal evolution of the PKD1 gene family in primates

Stefan Kirsch, Juanjo Pasantes, Andreas Wolf, Nadia Bogdanova, Claudia Münch, Arseni Markoff, Petra Pennekamp, Michael Krawczak, Bernd Dworniczak, Werner Schempp BMC Evolutionary Biology 2009, 9:14 (16 January 2009)

Abstract | Full text | PDF

173.

Methodology article   Open Access

Incorporating pathway information into boosting estimation of high-dimensional risk prediction models

Harald Binder, Martin Schumacher BMC Bioinformatics 2009, 10:18 (13 January 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

174.

Study protocol   Open Access

A prospective, non-randomized phase II trial of Trastuzumab and Capecitabine in patients with HER2 expressing metastasized pancreatic cancer

Andre Mihaljevic, Peter Büchler, Jan Harder, Ralf Hofheinz, Michael Gregor, Stephan Kanzler, Wolff Schmiegel, Volker Heinemann, Esther Endlicher, Günter Klöppel, Thomas Seufferlein, Michael Geissler BMC Surgery 2009, 9:1 (8 January 2009)

Abstract | Full text | PDF | PubMed

175.

Research article   Open Access Highly Accessed

Undue reliance on I2 in assessing heterogeneity may mislead

Gerta Rücker, Guido Schwarzer, James R Carpenter, Martin Schumacher BMC Medical Research Methodology 2008, 8:79 (27 November 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

While the heterogeneity statistic I^2 increases with the studies' sample size, tau^2 measures the clinical relevance of any heterogeneity, and is a more appropriate tool for deciding whether to pool treatment estimates in a meta-analysis.

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