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Work published with BioMed Central in the last 12 months by researchers at Indiana University at Bloomington
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Short communication
Activation of hedgehog signaling is not a frequent event in ovarian cancers Yang L, He J, Huang S, Zhang X, Bian Y, He N, Zhang H, Xie J Molecular Cancer 2009, 8 :112 (27 November 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research
Prediction of post-operative necrosis after mastectomy: A pilot study utilizing optical diffusion imaging spectroscopy Rao R, Saint-Cyr M, Ma AMT, Bowling M, Hatef DA, Andrews V, Xie XJ, Zogakis T, Rohrich R World Journal of Surgical Oncology 2009, 7 :91 (25 November 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Evidence for genetic association of RORB with bipolar disorder McGrath CL, Glatt SJ, Sklar P, Le-Niculescu H, Kuczenski R, Doyle AE, Biederman J, Mick E, Faraone SV, Niculescu AB, Tsuang MT BMC Psychiatry 2009, 9 :70 (12 November 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
An intelligent listening framework for capturing encounter notes from a doctor-patient dialog Klann JG, Szolovits P BMC Medical Informatics and Decision Making 2009, 9 (Suppl 1):S3 (3 November 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Temporal patterns of broad isoform expression during the development of neuronal lineages in Drosophila Zhou B, Williams DW, Altman J, Riddiford LM, Truman JW Neural Development 2009, 4 :39 (2 November 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
EST and microarray analysis of horn development in Onthophagus beetles Kijimoto T, Costello J, Tang Z, Moczek AP, Andrews J BMC Genomics 2009, 10 :504 (30 October 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
The effect of provider- and workflow-focused strategies for guideline implementation on provider acceptance Flanagan ME, Ramanujam R, Doebbeling BN Implementation Science 2009, 4 :71 (29 October 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Software
phyloXML: XML for evolutionary biology and comparative genomics Han MV, Zmasek CM BMC Bioinformatics 2009, 10 :356 (27 October 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Genetical genomic determinants of alcohol consumption in rats and humans Tabakoff B, Saba L, Printz M, Flodman P, Hodgkinson C, Goldman D, Koob G, Richardson HN, Kechris K, Bell RL, Hübner N, Heinig M, Pravenec M, Mangion J, Legault L, Dongier M, Conigrave KM, Whitfield JB, Saunders J, Grant B, Hoffman PL, WHO/ISBRA Study on State and Trait Markers of Alcoholism BMC Biology 2009, 7 :70 (27 October 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Chondroitin sulfate proteoglycans regulate the growth, differentiation and migration of multipotent neural precursor cells through the integrin signaling pathway Gu WL, Fu SL, Wang YX, Li Y, Lü HZ, Xu XM, Lu PH BMC Neuroscience 2009, 10 :128 (21 October 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Socioeconomic indicators of heat-related health risk supplemented with remotely sensed data Johnson DP, Wilson JS, Luber GC International Journal of Health Geographics 2009, 8 :57 (16 October 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research
Computerized intensive insulin dosing can mitigate hypoglycemia and achieve tight glycemic control when glucose measurement is performed frequently and on time Juneja R, Roudebush CP, Nasraway SA, Golas AA, Jacobi J, Carroll J, Nelson D, Abad VJ, Flanders SJ Critical Care 2009, 13 :R163 (12 October 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
HPD: an online integrated human pathway database enabling systems biology studies Chowbina SR, Wu X, Zhang F, Li PM, Pandey R, Kasamsetty HN, Chen JY BMC Bioinformatics 2009, 10 (Suppl 11):S5 (8 October 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
A model for extending antiretroviral care beyond the rural health centre Wools-Kaloustian KK, Sidle JE, Selke HM, Vedanthan R, Kemboi EK, Boit LJ, Jebet VT, Carroll AE, Tierney WM, Kimaiyo S Journal of the International AIDS Society 2009, 12 :22 (29 September 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Genomewide association study for onset age in Parkinson disease Latourelle JC, Pankratz N, Dumitriu A, Wilk JB, Goldwurm S, Pezzoli G, Mariani CB, DeStefano AL, Halter C, Gusella JF, Nichols WC, Myers RH, Foroud T, the PSG -PROGENI and GenePD Investigators, Coordinators and Molecular Genetic Laboratories BMC Medical Genetics 2009, 10 :98 (22 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
In their own words: qualitative study of high-utilising primary care patients with medically unexplained symptoms Dwamena FC, Lyles JS, Frankel RM, Smith RC BMC Family Practice 2009, 10 :67 (21 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Analysis of AML genes in dysregulated molecular networks Lee E, Jung H, Radivojac P, Kim JW, Lee D BMC Bioinformatics 2009, 10 (Suppl 9):S2 (17 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Gene networks in Drosophila melanogaster : integrating experimental data to predict gene function Costello JC, Dalkilic MM, Beason SM, Gehlhausen JR, Patwardhan R, Middha S, Eads BD, Andrews JR Genome Biology 2009, 10 :R97 (16 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Varicella-zoster virus reactivation from multiple ganglia: a case report Hashemilar M, Ghabili K, Shoja MM, Savadi-Oskouei D, Keyvani H Journal of Medical Case Reports 2009, 3 :9134 (14 September 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Seasonal transmission potential and activity peaks of the new influenza A(H1N1): a Monte Carlo likelihood analysis based on human mobility Balcan D, Hu H, Goncalves B, Bajardi P, Poletto C, Ramasco JJ, Paolotti D, Perra N, Tizzoni M, Broeck WV, Colizza V, Vespignani A BMC Medicine 2009, 7 :45 (10 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Otitis media: a genome-wide linkage scan with evidence of susceptibility loci within the 17q12 and 10q22.3 regions Casselbrant ML, Mandel EM, Jung J, Ferrell RE, Tekely K, Szatkiewicz JP, Ray A, Weeks DE BMC Medical Genetics 2009, 10 :85 (3 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Molecular analysis of Ku redox regulation Bennett SM, Neher TM, Shatilla A, Turchi JJ BMC Molecular Biology 2009, 10 :86 (28 August 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Haploinsufficiency for p190B RhoGAP inhibits MMTV-Neu tumor progression Heckman-Stoddard BM, Vargo-Gogola T, McHenry PR, Jiang V, Herrick MP, Hilsenbeck SG, Settleman J, Rosen JM Breast Cancer Research 2009, 11 :R61 (24 August 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Metastatic seminoma and grade 1 follicular lymphoma presenting concurrently in a supraclavicular lymph node: a case report Jacobsen E, Chen JH, Schurko B, Benson C, Oh WK Cases Journal 2009, 2 :7273 (19 August 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research
Energy density and weight change in a long-term weight-loss trial Flood A, Mitchell N, Jaeb M, Finch EA, Laqua PS, Welsh EM, Hotop A, Langer SL, Levy RL, Jeffery RW International Journal of Behavioral Nutrition and Physical Activity 2009, 6 :57 (14 August 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Inhibition of HIV-1 entry by extracts derived from traditional Chinese medicinal herbal plants Park IW, Han C, Song X, Green LA, Wang T, Liu Y, Cen C, Song X, Yang B, Chen G, He JJ BMC Complementary and Alternative Medicine 2009, 9 :29 (5 August 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
An integrative ChIP-chip and gene expression profiling to model SMAD regulatory modules Qin H, Chan MWY, Liyanarachchi S, Balch C, Potter D, Souriraj IJ, Cheng ASL, Agosto-Perez FJ, Nikonova EV, Yan PS, Lin HJ, Nephew KP, Saltz JH, Showe LC, Huang THM, Davuluri RV BMC Systems Biology 2009, 3 :73 (17 July 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
DPRESS: Localizing estimates of predictive uncertainty Clark RD Journal of Cheminformatics 2009, 1 :11 (14 July 2009) [Abstract ] [Full Text ] [PDF ]
Short report
RIZ1 is potential CML tumor suppressor that is down-regulated during disease progression Lakshmikuttyamma A, Takahashi N, Pastural E, Torlakovic E, Amin HM, Garcia-Manero G, Voralia M, Czader M, DeCoteau JF, Geyer CR Journal of Hematology & Oncology 2009, 2 :28 (14 July 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research
Protein disorder in the human diseasome: unfoldomics of human genetic diseases Midic U, Oldfield CJ, Dunker AK, Obradovic Z, Uversky VN BMC Genomics 2009, 10 (Suppl 1):S12 (7 July 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
HAPPI: an online database of comprehensive human annotated and predicted protein interactions Chen JY, Mamidipalli SR, Huan T BMC Genomics 2009, 10 (Suppl 1):S16 (7 July 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Reconstruct gene regulatory network using slice pattern model Wang Y, Wang G, Yang B, Tao H, Yang JY, Deng Y, Liu Y BMC Genomics 2009, 10 (Suppl 1):S2 (7 July 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Genome-wide prediction of cis -acting RNA elements regulating tissue-specific pre-mRNA alternative splicing Wang X, Wang K, Radovich M, Wang Y, Wang G, Feng W, Sanford JR, Liu Y BMC Genomics 2009, 10 (Suppl 1):S4 (7 July 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Unfoldomics of human diseases: linking protein intrinsic disorder with diseases Uversky VN, Oldfield CJ, Midic U, Xie H, Xue B, Vucetic S, Iakoucheva LM, Obradovic Z, Dunker AK BMC Genomics 2009, 10 (Suppl 1):S7 (7 July 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
The ACTIVE cognitive training trial and predicted medical expenditures Wolinsky FD, Mahncke HW, Kosinski M, Unverzagt FW, Smith DM, Jones RN, Stoddard A, Tennstedt SL BMC Health Services Research 2009, 9 :109 (29 June 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Methodology
Modeling AIDS survival after initiation of antiretroviral treatment by Weibull models with changepoints Yiannoutsos CT Journal of the International AIDS Society 2009, 12 :9 (26 June 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Meeting abstract
Prediction of peptide drift time in ion mobility-mass spectrometry Wang B, Valentine S, Raghuraman S, Plasencia M, Zhang X BMC Bioinformatics 2009, 10 (Suppl 7):A1 (25 June 2009) [Abstract ] [Full text ] [PDF ]
Research article
Integrated analysis of DNA methylation and gene expression reveals specific signaling pathways associated with platinum resistance in ovarian cancer Li M, Balch C, Montgomery JS, Jeong M, Chung JH, Yan P, Huang THM, Kim S, Nephew KP BMC Medical Genomics 2009, 2 :34 (8 June 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
The influence of regional basic science campuses on medical students' choice of specialty and practice location: a historical cohort study Brokaw JJ, Mandzuk CA, Wade ME, Deal DW, Johnson MT, White GW, Wilson JS, Zollinger TW BMC Medical Education 2009, 9 :29 (6 June 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Protein intrinsic disorder and influenza virulence: the 1918 H1N1 and H5N1 viruses Goh GKM, Dunker AK, Uversky VN Virology Journal 2009, 6 :69 (3 June 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Symbiotic relationship between brain structure and dynamics Rubinov M, Sporns O, van Leeuwen C, Breakspear M BMC Neuroscience 2009, 10 :55 (2 June 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
The endocannabinoid anandamide is a precursor for the signaling lipid N -arachidonoyl glycine by two distinct pathways Bradshaw HB, Rimmerman N, Hu SSJ, Benton VM, Stuart JM, Masuda K, Cravatt BF, O'Dell DK, Walker JM BMC Biochemistry 2009, 10 :14 (21 May 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx Meyer E, Aglyamova GV, Wang S, Buchanan-Carter J, Abrego D, Colbourne JK, Willis BL, Matz MV BMC Genomics 2009, 10 :219 (12 May 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Lactobacillus delbrueckii ssp. bulgaricus B-30892 can inhibit cytotoxic effects and adhesion of pathogenic Clostridium difficile to Caco-2 cellsBanerjee P, Merkel GJ, Bhunia AK Gut Pathogens 2009, 1 :8 (27 April 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Review
Non-expanded adipose stromal vascular fraction cell therapy for multiple sclerosis Riordan NH, Ichim TE, Min WP, Wang H, Solano F, Lara F, Alfaro M, Rodriguez JP, Harman RJ, Patel AN, Murphy MP, Lee RR, Minev B Journal of Translational Medicine 2009, 7 :29 (24 April 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
The components of the Daphnia pulex immune system as revealed by complete genome sequencing McTaggart SJ, Conlon C, Colbourne JK, Blaxter ML, Little TJ BMC Genomics 2009, 10 :175 (22 April 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Software
ESTPiper Tang Z, Choi JH, Hemmerich C, Sarangi A, Colbourne JK, Dong Q BMC Genomics 2009, 10 :174 (21 April 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
The chemoreceptor genes of the waterflea Daphnia pulex : many Grs but no Ors Peñalva-Arana DC, Lynch M, Robertson HM BMC Evolutionary Biology 2009, 9 :79 (21 April 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Meiosis genes in Daphnia pulex and the role of parthenogenesis in genome evolution Schurko AM, Logsdon JM, Eads BD BMC Evolutionary Biology 2009, 9 :78 (21 April 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
Syndromic surveillance: STL for modeling, visualizing, and monitoring disease counts Hafen RP, Anderson DE, Cleveland WS, Maciejewski R, Ebert DS, Abusalah A, Yakout M, Ouzzani M, Grannis SJ BMC Medical Informatics and Decision Making 2009, 9 :21 (21 April 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research article
A human polymorphism affects NEDD4L subcellular targeting by leading to two isoforms that contain or lack a C2 domain Garrone NF, Blazer-Yost BL, Weiss RB, Lalouel JM, Rohrwasser A BMC Cell Biology 2009, 10 :26 (13 April 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Impact of the Kenya post-election crisis on clinic attendance and medication adherence for HIV-infected children in western Kenya Vreeman RC, Nyandiko WM, Sang E, Musick BS, Braitstein P, Wiehe SE Conflict and Health 2009, 3 :5 (4 April 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Editorial
Grand challenges for cheminformatics Wild DJ Journal of Cheminformatics 2009, 1 :1 (17 March 2009) [Abstract ] [Full Text ] [PDF ]
Research
Feasibility investigation of allogeneic endometrial regenerative cells Zhong Z, Patel AN, Ichim TE, Riordan NH, Wang H, Min WP, Woods EJ, Reid M, Mansilla E, Marin GH, Drago H, Murphy MP, Minev B Journal of Translational Medicine 2009, 7 :15 (20 February 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research
Intrinsic disorder in Viral Proteins Genome-Linked: experimental and predictive analyses Hébrard E, Bessin Y, Michon T, Longhi S, Uversky VN, Delalande F, Van Dorsselaer A, Romero P, Walter J, Declerck N, Fargette D Virology Journal 2009, 6 :23 (16 February 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research
Enhanced pre-synaptic glutamate release in deep-dorsal horn contributes to calcium channel alpha-2-delta-1 protein-mediated spinal sensitization and behavioral hypersensitivity Nguyen D, Deng P, Matthews EA, Kim DS, Feng G, Dickenson AH, Xu ZC, Luo ZD Molecular Pain 2009, 5 :6 (12 February 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research
Evaluation of the anti-ischemic effects of D-ribose during dobutamine stress echocardiography: a pilot study Sawada SG, Lewis S, Kovacs R, Khouri S, Gradus-Pizlo I, St Cyr JA, Feigenbaum H Cardiovascular Ultrasound 2009, 7 :5 (7 February 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Poster presentation
Fragmented QRS complexes on a 12-lead ECG as a marker of non-coronary artery disease related myocardial disease by gadolinium delayed enhancement cardiac magnetic resonance imaging Homsi M, Alsayed L, Safadi A, Das MK, Mahenthiran J Journal of Cardiovascular Magnetic Resonance 2009, 11 (Suppl 1):P58 (28 January 2009) [Abstract ] [Full text ] [PDF ]
Case Report
Transient loss of consciousness caused by cryptococcal meningitis in an immunocompetent patient: a case report Wilbur L, Heyborne R Cases Journal 2009, 2 :60 (15 January 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research
Endocannabinoids in Alzheimer's disease and their impact on normative cognitive performance: a case-control and cohort study Koppel J, Bradshaw H, Goldberg TE, Khalili H, Marambaud P, Walker MJ, Pazos M, Gordon ML, Christen E, Davies P Lipids in Health and Disease 2009, 8 :2 (14 January 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Genome screen in familial intracranial aneurysm Foroud T, Sauerbeck L, Brown R, Anderson C, Woo D, Kleindorfer D, Flaherty ML, Deka R, Hornung R, Meissner I, Bailey-Wilson JE, Langefeld C, Rouleau G, Connolly ES, Lai D, Koller DL, Huston J, Broderick JP, the FIA Study Investigators [Familial Intracranial Aneurysm Study Investigators] BMC Medical Genetics 2009, 10 :3 (13 January 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Correction
Correction: Breast cancer proteomics reveals correlation between estrogen receptor status and differential phosphorylation of PGRMC1 Neubauer H, Clare SE, Wozny W, Schwall GP, Poznanovic S, Stegmann W, Vogel U, Sotlar K, Wallwiener D, Kurek R, Fehm T, Cahill MA Breast Cancer Research 2009, 11 :401 (13 January 2009) [Abstract ] [Full text ] [PDF ]
Research
Production of recombinant AAV vectors encoding insulin-like growth factor I is enhanced by interaction among AAV rep regulatory sequences Shi S, Mercer SA, Dilley R, Trippel SB Virology Journal 2009, 6 :3 (7 January 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Intracellular amyloid formation in muscle cells of ACaenorhabditis elegans : determinants and physiological role in copper detoxification Minniti AN, Rebolledo DL, Grez PM, Fadic R, Aldunate R, Volitakis I, Cherny RA, Opazo C, Masters C, Bush AI, Inestrosa NC Molecular Neurodegeneration 2009, 4 :2 (6 January 2009) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
Research article
Proteomic analysis of tumor necrosis factor- Zhou C, Nitschke AM, Xiong W, Zhang Q, Tang Y, Bloch M, Elliott S, Zhu Y, Bazzone L, Yu D, Weldon CB, Schiff R, McLachlan JA, Beckman BS, Wiese TE, Nephew KP, Shan B, Burow ME, Wang G Breast Cancer Research 2008, 10 :R105 (16 December 2008) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Case report
Takotsubo cardiomyopathy in a patient with esophageal cancer: a case report Gangadhar TC, Von der Lohe E, Sawada SG, Helft PR Journal of Medical Case Reports 2008, 2 :379 (8 December 2008) [Abstract ] [Full Text ] [PDF ] [PubMed ] [Related articles ]
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by Indiana University at Bloomington
a web-based analysis pipeline for expressed sequence tags
-transgenic Caenorhabditis elegans: determinants and physiological role in copper detoxification
resistant human breast cancer cells reveals a MEK5/Erk5-mediated epithelial-mesenchymal transition phenotype