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Work published with BioMed Central, Chemistry Central and SpringerOpen by researchers at Institut Pasteur

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301.

Research   Open Access

In vivo gene targeting of IL-3 into immature hematopoietic cells through CD117 receptor mediated antibody gene delivery

Alain Chapel, Olivier Deas, Morad Bensidhoum, Sabine François, Moubarak Mouiseddine, Pascal Poncet, Antoine Dürrbach, Jocelyne Aigueperse, Patrick Gourmelon, Norbert C Gorin, François Hirsch, Dominique Thierry Genetic Vaccines and Therapy 2004, 2:16 (27 October 2004)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

302.

Research article   Open Access

Classification between normal and tumor tissues based on the pair-wise gene expression ratio

YeeLeng Yap, XueWu Zhang, MT Ling, XiangHong Wang, YC Wong, Antoine Danchin BMC Cancer 2004, 4:72 (7 October 2004)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

303.

Research article   Open Access

Experimental evaluation of the relationship between lethal or non-lethal virulence and transmission success in malaria parasite infections

REL Paul, T Lafond, CDM Müller-Graf, S Nithiuthai, PT Brey, JC Koella BMC Evolutionary Biology 2004, 4:30 (8 September 2004)

Abstract | Full text | PDF | PubMed

304.

Method   Open Access

Large-scale exploration of growth inhibition caused by overexpression of genomic fragments in Saccharomyces cerevisiae

Jeanne Boyer, Gwenaël Badis, Cécile Fairhead, Emmanuel Talla, Florence Hantraye, Emmanuelle Fabre, Gilles Fischer, Christophe Hennequin, Romain Koszul, Ingrid Lafontaine, Odile Ozier-Kalogeropoulos, Miria Ricchetti, Guy-Franck Richard, Agnès Thierry, Bernard Dujon Genome Biology 2004, 5:R72 (31 August 2004)

Abstract | Full text | PDF | PubMed |  Editor’s summary

A screen of the Saccharomyces cerevisiae genome for fragments conferring a growth-impairment phenotype identified 714 fragments in about 84,000 clones tested.

305.

Research   Open Access

Analysis of HIV-1 Vpr determinants responsible for cell growth arrest in Saccharomyces cerevisiae

Xiao-Jian Yao, Nicole Rougeau, Ghislaine Duisit, Julie Lemay, Éric A Cohen Retrovirology 2004, 1:21 (16 August 2004)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

306.

Methodology article   Open Access

Spotting effect in microarray experiments

Tristan Mary-Huard, Jean-Jacques Daudin, Stéphane Robin, Frédérique Bitton, Eric Cabannes, Pierre Hilson BMC Bioinformatics 2004, 5:63 (19 May 2004)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

307.

Review   Open Access Highly Accessed

Protein quality control in the bacterial periplasm

Marika Miot, Jean-Michel Betton Microbial Cell Factories 2004, 3:4 (7 May 2004)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

308.

Research article   Open Access Highly Accessed

Bacterial variations on the methionine salvage pathway

Agnieszka Sekowska, Valérie Dénervaud, Hiroki Ashida, Karine Michoud, Dieter Haas, Akiho Yokota, Antoine Danchin BMC Microbiology 2004, 4:9 (4 March 2004)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

309.

Correction   Open Access

Correction: Characterisation of RT1-E2, a multigenic family of highly conserved rat non-classical MHC class I molecules initially identified in cells from immunoprivileged sites

Pierre Lau, Claire Amadou, Hélène Brun, Virginie Rouillon, Fiona McLaren, Anne-France Le Rolle, Margaret Graham, Geoffrey W Butcher, Etienne Joly BMC Immunology 2004, 5:4 (19 February 2004)

Abstract | Full text | PDF | PubMed

310.

Research article   Open Access Highly Accessed

A novel design of whole-genome microarray probes for Saccharomyces cerevisiae which minimizes cross-hybridization

Emmanuel Talla, Fredj Tekaia, Laurent Brino, Bernard Dujon BMC Genomics 2003, 4:38 (22 September 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

311.

Research article   Open Access

Relationship of SARS-CoV to other pathogenic RNA viruses explored by tetranucleotide usage profiling

Yee Yap, Xue Zhang, Antoine Danchin BMC Bioinformatics 2003, 4:43 (20 September 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

312.

Research article   Open Access Highly Accessed

A double epidemic model for the SARS propagation

Tuen Ng, Gabriel Turinici, Antoine Danchin BMC Infectious Diseases 2003, 3:19 (10 September 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

313.

Research   Open Access

CpG content affects gene silencing in mice: evidence from novel transgenes

Christine Chevalier-Mariette, Isabelle Henry, Lucile Montfort, Suzanne Capgras, Sylvie Forlani, John Muschler, Jean-François Nicolas Genome Biology 2003, 4:R53 (14 August 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

It has been demonstrated that the density of CpG sequences in the transcribed regions of transgenes can have a causal role in repression of transcription. These results show that the mechanism by which CpG islands escape de novo methylation is sensitive to CpG density of adjacent sequences.

314.

Research   Open Access Highly Accessed

Plants traditionally prescribed to treat tazo (malaria) in the eastern region of Madagascar

Milijaona Randrianarivelojosia, Valérie T Rasidimanana, Harison Rabarison, Peter K Cheplogoi, Michel Ratsimbason, Dulcie A Mulholland, Philippe Mauclère Malaria Journal 2003, 2:25 (24 July 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

This is a useful contribution to the study of Madagascan medicinal plants, which shows care and sensitivity in collecting the ethnobotanical data.

315.

Research article   Open Access

Characterisation of RT1-E2, a multigenic family of highly conserved rat non-classical MHC class I molecules initially identified in cells from immunoprivileged sites

Pierre Lau, Claire Amadou, Hélène Brun, Virginie Rouillon, Fiona McLaren, Anne-France Le Rolle, Margaret Graham, Geoffrey W Butcher, Etienne Joly BMC Immunology 2003, 4:7 (1 July 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

A new family of non-classical MHC class I molecules has been found in the rat. The highly conserved extracellular sequence of these RT1-E2 molecules suggests that they associate with a specific set of ligands.

316.

Research article   Open Access

Gene structure and chromosomal localization of mouse Opa1 : its exclusion from the Bst locus

Cécile Delettre, Guy Lenaers, Pascale Belenguer, Christian P Hamel BMC Genetics 2003, 4:8 (7 May 2003)

Abstract | Full text | PDF | PubMed

317.

Research article   Open Access

Polymeric immunoglobulin receptor polymorphisms and risk of nasopharyngeal cancer

Rungnapa Hirunsatit, Narisorn Kongruttanachok, Kanjana Shotelersuk, Pakpoom Supiyaphun, Narin Voravud, Anavaj Sakuntabhai, Apiwat Mutirangura BMC Genetics 2003, 4:3 (21 January 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

318.

Review   Free

Gene profiling for defining targets for new therapeutics in autoimmune diseases

Lars Rogge Arthritis Res Ther 2003, 5:47-50 (6 January 2003)

Abstract | Full text | PDF | PubMed

319.

Correspondence   Free

Rosetta Stone proteins: "chance and necessity"?

Reiner A Veitia Genome Biology 2002, 3:interactions1001-interactions1001.3 (8 January 2002)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

A response to Functional associations of proteins in entire genomes by means of exhaustive detection of gene fusions by AJ Enright, CA Ouzounis. Genome Biology 2000, 2:research0034.1-0034.7

320.

Methodology article   Open Access

Long term adaptation of a microbial population to a permanent metabolic constraint: overcoming thymineless death by experimental evolution of Escherichia coli

Valérie A de Crécy-Lagard, Jacques Bellalou, Rupert Mutzel, Philippe Marlière BMC Biotechnology 2001, 1:10 (20 November 2001)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

321.

Meeting report   Free

Learning the language of cell-cell communication through connexin channels

Roberto Bruzzone Genome Biology 2001, 2:reports4027-reports4027.5 (15 October 2001)

Abstract | Full text | PDF | PubMed |  Editor’s summary

A report on the Ninth International Gap Junction Conference, Honolulu, USA, 4-9 August 2001.

322.

Research article   Open Access

MtnK, methylthioribose kinase, is a starvation-induced protein in Bacillus subtilis

Agnieszka Sekowska, Laurence Mulard, Susanne Krogh, Jane KS Tse, Antoine Danchin BMC Microbiology 2001, 1:15 (8 August 2001)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

323.

Research   Open Access Highly Accessed

Extracting biological information from DNA arrays: an unexpected link between arginine and methionine metabolism in Bacillus subtilis

Agnieszka Sekowska, Stephane Robin, Jean-Jacques Daudin, Alain Henaut, Antoine Danchin Genome Biology 2001, 2:research0019-research0019.12 (1 June 2001)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Using variance analysis it is possible to distinguish between systematic biases and relevant gene-expression variation in transcriptome experiments. Co-variation of metabolic gene expression pathways was thus uncovered linking nitrogen and sulfur metabolism in B. subtilis.

324.

Research article   Open Access

Analysis of stress- and host cell-induced expression of the Mycobacterium tuberculosis inorganic pyrophosphatase

James A Triccas, Brigitte Gicquel BMC Microbiology 2001, 1:3 (24 April 2001)

Abstract | Full text | PDF | PubMed

325.

Research article   Open Access Highly Accessed

A tandem repeats database for bacterial genomes: application to the genotyping of Yersinia pestis and Bacillus anthracis

Philippe Le Flèche, Yolande Hauck, Lucie Onteniente, Agnès Prieur, France Denoeud, Vincent Ramisse, Patricia Sylvestre, Gary Benson, Françoise Ramisse, Gilles Vergnaud BMC Microbiology 2001, 1:2 (30 March 2001)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

A new bacterial genotyping tool, the tandem repeats database, enables even recently evolved pathogens to be characterized. These powerful genetic markers promise to have applications in studying the epidemiology and evolution of bacterial pathogens.

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