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Work published with BioMed Central, Chemistry Central and SpringerOpen by researchers at University of Massachusetts Medical School

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101.

Research   Open Access Highly Accessed

Prevalence and antimicrobial susceptibilities of bacteria isolated from blood cultures of hospitalized patients in the United States in 2002

James A Karlowsky, Mark E Jones, Deborah C Draghi, Clyde Thornsberry, Daniel F Sahm, Gregory A Volturo Annals of Clinical Microbiology and Antimicrobials 2004, 3:7 (10 May 2004)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

102.

Research article   Open Access

Acetaminophen-cysteine adducts during therapeutic dosing and following overdose

Kennon J Heard, Jody L Green, Laura P James, Bryan S Judge, Liza Zolot, Sean Rhyee, Richard C Dart BMC Gastroenterology 2011, 11:20 (14 March 2011)

Abstract | Full text | PDF | PubMed

103.

Research   Open Access Highly Accessed

Alterations in urine, serum and brain metabolomic profiles exhibit sexual dimorphism during malaria disease progression

Angika Basant, Mayuri Rege, Shobhona Sharma, Haripalsingh M Sonawat Malaria Journal 2010, 9:110 (23 April 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

The primary goal of this study was to investigate whether metabolic changes in response to Plasmodium berghei ANKA infection differ between males and females. The authors illustrate sex differences, primarily in urine during the early stages of infection.

104.

Research article   Open Access

A physical map of a BAC clone contig covering the entire autosome insertion between ovine MHC Class IIa and IIb

Gang Li, Ka Liu, Shasha Jiao, Haibo Liu, Hugh T Blair, Peng Zhang, Xiaoran Cui, Pingping Tan, Jianfeng Gao, Runlin Z Ma BMC Genomics 2012, 13:398 (16 August 2012)

Abstract | Full text | PDF | PubMed

105.

Research article   Open Access Highly Accessed

Cytoplasmic polyadenylation and cytoplasmic polyadenylation element-dependent mRNA regulation are involved in Xenopus retinal axon development

Andrew C Lin, Chin Tan, Chien-Ling Lin, Laure Strochlic, Yi-Shuian Huang, Joel D Richter, Christine E Holt Neural Development 2009, 4:8 (2 March 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

106.

Research   Open Access

Influence of genetic variations in TLR4 and TIRAP/Mal on the course of sepsis and pneumonia and cytokine release: an observational study in three cohorts

Oliver Kumpf, Evangelos J Giamarellos-Bourboulis, Alexander Koch, Lutz Hamann, Maria Mouktaroudi, Djin-Ye Oh, Eicke Latz, Eva Lorenz, David A Schwartz, Bart Ferwerda, Christina Routsi, Chryssanthi Skalioti, Bart-Jan Kullberg, Jos WM van der Meer, Peter M Schlag, Mihai G Netea, Kai Zacharowski, Ralf R Schumann Critical Care 2010, 14:R103 (3 June 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

107.

Research   Open Access

Variation in HIV-1 R5 macrophage-tropism correlates with sensitivity to reagents that block envelope: CD4 interactions but not with sensitivity to other entry inhibitors

Paul J Peters, Maria J Duenas-Decamp, W Matthew Sullivan, Richard Brown, Chiambah Ankghuambom, Katherine Luzuriaga, James Robinson, Dennis R Burton, Jeanne Bell, Peter Simmonds, Jonathan Ball, Paul R Clapham Retrovirology 2008, 5:5 (18 January 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

108.

Research article   Open Access

The OXR domain defines a conserved family of eukaryotic oxidation resistance proteins

Mathieu Durand, Adrianne Kolpak, Timothy Farrell, Nathan A Elliott, Wenlin Shao, Myles Brown, Michael R Volkert BMC Cell Biology 2007, 8:13 (28 March 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

109.

Research article   Open Access Highly Accessed

Identifying strategies to improve access to credible and relevant information for public health professionals: a qualitative study

Nancy R LaPelle, Roger Luckmann, E Hatheway Simpson, Elaine R Martin BMC Public Health 2006, 6:89 (5 April 2006)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

New strategies to improve current information delivery systems and develop new models of information organization and delivery are required to address public health practitioners' information needs.

110.

Research article   Open Access

Patients’ knowledge and beliefs concerning gout and its treatment: a population based study

Leslie R Harrold, Kathleen M Mazor, Daniel Peterson, Nausheen Naz, Cassandra Firneno, Robert A Yood BMC Musculoskeletal Disorders 2012, 13:180 (21 September 2012)

Abstract | Full text | PDF | PubMed

111.

Correction   Free

Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development

Marilyn B Renfree, Anthony T Papenfuss, Janine E Deakin, James Lindsay, Thomas Heider, Katherine Belov, Willem Rens, Paul D Waters, Elizabeth A Pharo, Geoff Shaw, Emily SW Wong, Christophe M Lefèvre, Kevin R Nicholas, Yoko Kuroki, Matthew J Wakefield, Kyall R Zenger, Chenwei Wang, Malcolm Ferguson-Smith, Frank W Nicholas, Danielle Hickford, Hongshi Yu, Kirsty R Short, Hannah V Siddle, Stephen R Frankenberg, Keng Y Chew, Brandon R Menzies, Jessica M Stringer, Shunsuke Suzuki, Timothy A Hore, Margaret L Delbridge et al. Genome Biology 2011, 12:414 (30 December 2011)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Correction: The tammar wallaby genome and transcriptome sequences yield insights into many aspects of mammalian biology

112.

Research article   Open Access Highly Accessed

Defining behavioral and molecular differences between summer and migratory monarch butterflies

Haisun Zhu, Robert J Gegear, Amy Casselman, Sriramana Kanginakudru, Steven M Reppert BMC Biology 2009, 7:14 (31 March 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Migratory behavior in monarch butterflies normally coincides with reproductive arrest due to a seasonal drop in juvenile hormone levels, but hormone treatment can restore reproductive activity without suppressing the urge to fly south.

113.

Research article   Open Access Highly Accessed

Systematic literature review assessing tobacco smoke exposure as a risk factor for serious respiratory syncytial virus disease among infants and young children

Joseph R DiFranza, Anthony Masaquel, Amy M Barrett, Ann D Colosia, Parthiv J Mahadevia BMC Pediatrics 2012, 12:81 (21 June 2012)

Abstract | Full text | PDF | PubMed

114.

Research   Open Access

GC- and AT-rich chromatin domains differ in conformation and histone modification status and are differentially modulated by Rpd3p

Job Dekker Genome Biology 2007, 8:R116 (18 June 2007)

Abstract | Full text | PDF | PubMed |  Editor’s summary

GC-rich and AT-rich chromatin domains display distinct chromatin conformations and are marked by distinct patterns of histone modifications, and the histone deacetylase Rpd3p is an attenuator of these differences.

115.

Short report   Open Access

The W100 pocket on HIV-1 gp120 penetrated by b12 is not a target for other CD4bs monoclonal antibodies

Maria J Dueñas-Decamp, Olivia J O'Connell, Davide Corti, Susan Zolla-Pazner, Paul R Clapham Retrovirology 2012, 9:9 (27 January 2012)

Abstract | Full text | PDF | PubMed |  Editor’s summary

This study indicates that the b12 W100 pocket on gp120 is targeted infrequently by CD4bs mabs. This site is therefore not a priority for preservation in vaccines aiming to elicit antibodies targeting the CD4bs.

116.

Research   Open Access Highly Accessed

RNA polymerase mapping during stress responses reveals widespread nonproductive transcription in yeast

Tae Soo Kim, Chih Long Liu, Moran Yassour, John Holik, Nir Friedman, Stephen Buratowski, Oliver J Rando Genome Biology 2010, 11:R75 (16 July 2010)

Abstract | Full text | PDF | PubMed |  Editor’s summary

ChIP-chip for RNA PolII occupancy and transcription analysis reveals that mRNA levels in yeast do not correlate with PolII abundance on genes.

117.

Minireview   Free Highly Accessed

Chromatin 'programming' by sequence - is there more to the nucleosome code than %GC?

Amanda Hughes, Oliver J Rando Journal of Biology 2009, 8:96 (23 December 2009)

Abstract | Full text | PDF | PubMed |  Editor’s summary

How far is packaging of DNA by nucleosomes directed by DNA sequence? Hughes and Rando discuss this issue in the light of new research in BMC Bioinformatics indicating that nucleosome occupancy is largely determined by the GC content of DNA.

118.

Research article   Open Access

Correlation of umbilical cord blood hormones and growth factors with stem cell potential: implications for the prenatal origin of breast cancer hypothesis

Todd M Savarese, William C Strohsnitter, Hoi Low, Qin Liu, Inkyung Baik, William Okulicz, David P Chelmow, Pagona Lagiou, Peter J Quesenberry, Kenneth L Noller, Chung-Cheng Hsieh Breast Cancer Research 2007, 9:R29 (14 May 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

119.

Research article   Open Access Highly Accessed

Translation reinitiation and development are compromised in similar ways by mutations in translation initiation factor eIF3h and the ribosomal protein RPL24

Fujun Zhou, Bijoyita Roy, Albrecht G von Arnim BMC Plant Biology 2010, 10:193 (27 August 2010)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Mutations in the Arabidopsis translation initiation factor eIF3 and ribosomal protein RPL24 impair translation re-initiation of mRNAs containing a regulatory upstream-ORF in a similar manner leading to auxin-related development defects.

120.

Research article   Open Access Highly Accessed

Evolution of coding and non-coding genes in HOX clusters of a marsupial

Hongshi Yu, James Lindsay, Zhi-Ping Feng, Stephen Frankenberg, Yanqiu Hu, Dawn Carone, Geoff Shaw, Andrew J Pask, Rachel O’Neill, Anthony T Papenfuss, Marilyn B Renfree BMC Genomics 2012, 13:251 (18 June 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

121.

Research   Open Access

Predictors of serum dioxin levels among adolescent boys in Chapaevsk, Russia: A cross-sectional pilot study

Russ Hauser, Paige Williams, Larisa Altshul, Susan Korrick, Lynne Peeples, Donald G Patterson, Wayman E Turner, Mary M Lee, Boris Revich, Oleg Sergeyev Environmental Health: A Global Access Science Source 2005, 4:8 (26 May 2005)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

122.

Study protocol   Open Access

A randomized clinical trial of a peri-operative behavioral intervention to improve physical activity adherence and functional outcomes following total knee replacement

Milagros C Rosal, David Ayers, Wenjun Li, Carol Oatis, Amy Borg, Hua Zheng, Patricia Franklin BMC Musculoskeletal Disorders 2011, 12:226 (7 October 2011)

Abstract | Full text | PDF | PubMed

123.

Research article   Open Access Highly Accessed

Structure of the yeast histone H3-ASF1 interaction: implications for chaperone mechanism, species-specific interactions, and epigenetics

Andrew J Antczak, Toshiaki Tsubota, Paul D Kaufman, James M Berger BMC Structural Biology 2006, 6:26 (13 December 2006)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

124.

Methodology article   Open Access Highly Accessed

Mutation detection using ENDO1: Application to disease diagnostics in humans and TILLING and Eco-TILLING in plants

Karine Triques, Elodie Piednoir, Marion Dalmais, Julien Schmidt, Christine Le Signor, Mark Sharkey, Michel Caboche, Bénédicte Sturbois, Abdelhafid Bendahmane BMC Molecular Biology 2008, 9:42 (23 April 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

125.

Methodology article   Open Access Highly Accessed

A construct with fluorescent indicators for conditional expression of miRNA

Linghua Qiu, Hongyan Wang, Xugang Xia, Hongxia Zhou, Zuoshang Xu BMC Biotechnology 2008, 8:77 (7 October 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

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