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BMC  Supporter member - Cold Spring Harbor Laboratory

CSHL is a research and educational institution. The laboratory has research programs focusing on cancer, neurobiology, plant genetics, genomics and bioinformatics, and a broad educational mission, including the recently established Watston School of Biological Sciences.

http://www.cshl.org


Research staff and students at Cold Spring Harbor Laboratory:
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Work published with BioMed Central in the last 12 months by researchers at Cold Spring Harbor Laboratory


Order by: Date published / Most viewed (30 days) / Most viewed (past year)


Oral presentation    
Chronux: a platform for analyzing neural signals
Bokil HS, Andrews P, Maniar H, Pesaran B, Kulkarni J, Loader C, Mitra PP
BMC Neuroscience 2009, 10(Suppl 1):S3 (29 September 2009)
[Abstract] [Full text] [PDF]

Research    
High resolution transcriptome maps for wild-type and nonsense-mediated decay-defective Caenorhabditis elegans
Ramani AK, Nelson AC, Kapranov P, Bell I, Gingeras TR, Fraser AG
Genome Biology 2009, 10:R101 (24 September 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Software    
SSWAP: A Simple Semantic Web Architecture and Protocol for semantic web services
Gessler DDG, Schiltz GS, May GD, Avraham S, Town CD, Grant D, Nelson RT
BMC Bioinformatics 2009, 10:309 (23 September 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article    
An archived activation tagged population of Arabidopsis thaliana to facilitate forward genetics approaches
Robinson SJ, Tang LH, Mooney BAG, McKay SJ, Clarke WE, Links MG, Karcz S, Regan S, Wu YY, Gruber MY, Cui D, Yu M, Parkin IAP
BMC Plant Biology 2009, 9:101 (31 July 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article    
A Myc-regulated transcriptional network controls B-cell fate in response to BCR triggering
Murn J, Mlinaric-Rascan I, Vaigot P, Alibert O, Frouin V, Gidrol X
BMC Genomics 2009, 10:323 (17 July 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Poster presentation    
Is the formation of ocular dominance patterns instructed by molecular labels?
Tsigankov D, Koulakov A
BMC Neuroscience 2009, 10(Suppl 1):P65 (13 July 2009)
[Abstract] [Full text] [PDF]

Research article    
GAGE: generally applicable gene set enrichment for pathway analysis
Luo W, Friedman MS, Shedden K, Hankenson KD, Woolf PJ
BMC Bioinformatics 2009, 10:161 (27 May 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article    
Determination of enriched histone modifications in non-genic portions of the human genome
Rosenfeld JA, Wang Z, Schones DE, Zhao K, DeSalle R, Zhang MQ
BMC Genomics 2009, 10:143 (31 March 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article    
A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines
Boles MK, Wilkinson BM, Maxwell A, Lai L, Mills AA, Nishijima I, Salinger AP, Moskowitz I, Hirschi KK, Liu B, Bradley A, Justice MJ
BMC Genetics 2009, 10:12 (6 March 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article    
Gene set-based module discovery in the breast cancer transcriptome
Niida A, Smith AD, Imoto S, Aburatani H, Zhang MQ, Akiyama T
BMC Bioinformatics 2009, 10:71 (26 February 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Correction    
Correction: Reactome: a knowledge base of biologic pathways and processes
Vastrik I, D'Eustachio P, Schmidt E, Gopinath G, Croft D, de Bono B, Gillespie M, Jassal B, Lewis S, Matthews L, Wu G, Birney E, Stein L
Genome Biology 2009, 10:402 (4 February 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Introduction    
The Seventh Asia Pacific Bioinformatics Conference (APBC2009)
Zhang MQ, Waterman MS, Zhang X
BMC Bioinformatics 2009, 10(Suppl 1):S1 (30 January 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article    
nGASP the nematode genome annotation assessment project
Coghlan A, Fiedler TJ, McKay SJ, Flicek P, Harris TW, Blasiar D, the nGASP Consortium , Stein LD
BMC Bioinformatics 2008, 9:549 (19 December 2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]


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