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51.

Research article   Open Access Highly Accessed

Comprehensive analysis of CCCH zinc finger family in poplar (Populus trichocarpa)

Guohua Chai, Ruibo Hu, Dongyuan Zhang, Guang Qi, Ran Zuo, Yingping Cao, Peng Chen, Yingzhen Kong, Gongke Zhou BMC Genomics 2012, 13:253 (18 June 2012)

Abstract | Full text | PDF | PubMed

52.

Research article   Open Access Highly Accessed

Larval midgut modifications associated with Bti resistance in the yellow fever mosquito using proteomic and transcriptomic approaches

Guillaume Tetreau, Krishnareddy Bayyareddy, Christopher M Jones, Renaud Stalinski, Muhammad A Riaz, Margot Paris, Jean-Philippe David, Michael J Adang, Laurence Després BMC Genomics 2012, 13:248 (15 June 2012)

Abstract | Full text | PDF | PubMed

53.

Research article   Open Access

QTL mapping reveals the genetic architecture of loci affecting pre- and post-zygotic isolating barriers in Louisiana Iris

Evangeline S Ballerini, Amanda N Brothers, Shunxue Tang, Steven J Knapp, Amy Bouck, Sunni J Taylor, Michael L Arnold, Noland H Martin BMC Plant Biology 2012, 12:91 (15 June 2012)

Abstract | Full text | PDF | PubMed

54.

Poster presentation   Open Access

P02.194. Newly developed functional medicine program in diabetes: impact on clinical and patient reported outcomes - functional medicine and quality of life

D Franic, C Snapp, R DeBusk BMC Complementary and Alternative Medicine 2012, 12(Suppl 1):P250 (12 June 2012)

Full text | PDF

55.

Research   Open Access

Simultaneous utilization of glucose, xylose and arabinose in the presence of acetate by a consortium of Escherichia coli strains

Tian Xia, Mark A Eiteman, Elliot Altman Microbial Cell Factories 2012, 11:77 (12 June 2012)

Abstract | Full text | PDF | PubMed

56.

Research   Open Access Highly Accessed

Effects of protein intake and gender on body composition changes: a randomized clinical weight loss trial

Ellen M Evans, Mina C Mojtahedi, Matthew P Thorpe, Rudy J Valentine, Penny M Kris-Etherton, Donald K Layman Nutrition & Metabolism 2012, 9:55 (12 June 2012)

Abstract | Full text | PDF | PubMed

57.

Proceedings   Open Access

Simultaneous prediction of RNA secondary structure and helix coaxial stacking

Pooya Shareghi, Yingfeng Wang, Russell Malmberg, Liming Cai BMC Genomics 2012, 13(Suppl 3):S7 (11 June 2012)

Abstract | Full text | PDF | PubMed

58.

Proceedings   Open Access

The phenylalanine ammonia lyase (PAL) gene family shows a gymnosperm-specific lineage

Ujwal R Bagal, James H Leebens-Mack, W Walter Lorenz, Jeffrey FD Dean BMC Genomics 2012, 13(Suppl 3):S1 (11 June 2012)

Abstract | Full text | PDF | PubMed

59.

Software   Open Access

Quartet decomposition server: a platform for analyzing phylogenetic trees

Fenglou Mao, David Williams, Olga Zhaxybayeva, Maria Poptsova, Pascal Lapierre, J Gogarten, Ying Xu BMC Bioinformatics 2012, 13:123 (7 June 2012)

Abstract | Full text | PDF | PubMed

60.

Research article   Open Access

Genetic mapping and identification of QTL for earliness in the globe artichoke/cultivated cardoon complex

Ezio Portis, Davide Scaglione, Alberto Acquadro, Giovanni Mauromicale, Rosario Mauro, Steven J Knapp, Sergio Lanteri BMC Research Notes 2012, 5:252 (23 May 2012)

Abstract | Full text | PDF | PubMed

61.

Research article   Open Access

Differences in DNA curvature-related sequence periodicity between prokaryotic chromosomes and phages, and relationship to chromosomal prophage content

Jacob Abel, Jan Mrázek BMC Genomics 2012, 13:188 (15 May 2012)

Abstract | Full text | PDF | PubMed

62.

Research article   Open Access

Construction of physical maps for the sex-specific regions of papaya sex chromosomes

Jong-Kuk Na, Jianping Wang, Jan E Murray, Andrea R Gschwend, Wenli Zhang, Qingyi Yu, Rafael Pérez, F Feltus, Cuixia Chen, Zdenek Kubat, Paul H Moore, Jiming Jiang, Andrew H Paterson, Ray Ming BMC Genomics 2012, 13:176 (8 May 2012)

Abstract | Full text | PDF | PubMed

63.

Research   Open Access

Development stage-specific proteomic profiling uncovers small, lineage specific proteins most abundant in the Aspergillus Fumigatus conidial proteome

Moo-Jin Suh, Natalie D Fedorova, Steven E Cagas, Susan Hastings, Robert D Fleischmann, Scott N Peterson, David S Perlin, William C Nierman, Rembert Pieper, Michelle Momany Proteome Science 2012, 10:30 (30 April 2012)

Abstract | Full text | PDF | PubMed

64.

Research   Open Access Highly Accessed

Temporal trends of sulphadoxine-pyrimethamine (SP) drug-resistance molecular markers in Plasmodium falciparum parasites from pregnant women in western Kenya

Nnaemeka C Iriemenam, Monica Shah, Wangeci Gatei, Anna M van Eijk, John Ayisi, Simon Kariuki, Jodi Vanden Eng, Simon O Owino, Ashima A Lal, Yusuf O Omosun, Kephas Otieno, Meghna Desai, Feiko O ter Kuile, Bernard Nahlen, Julie Moore, Mary J Hamel, Peter Ouma, Laurence Slutsker, Ya Ping Shi Malaria Journal 2012, 11:134 (27 April 2012)

Abstract | Full text | PDF | PubMed |  Editor’s summary

This article summarizes the longitudinal progression of the prevalence of the alleles of Pfdhfr and Pfdhps in samples from pregnant women in and around Kisumu, Kenya

65.

Research   Open Access

Stable stem enabled Shannon entropies distinguish non-coding RNAs from random backgrounds

Yingfeng Wang, Amir Manzour, Pooya Shareghi, Timothy I Shaw, Ying-Wai Li, Russell L Malmberg, Liming Cai BMC Bioinformatics 2012, 13(Suppl 5):S1 (12 April 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

66.

Research   Open Access

Biosynthesis of caffeic acid in Escherichia coli using its endogenous hydroxylase complex

Yuheng Lin, Yajun Yan Microbial Cell Factories 2012, 11:42 (4 April 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

67.

Review   Open Access Highly Accessed

Role of carotenoid β-cryptoxanthin in bone homeostasis

Masayoshi Yamaguchi Journal of Biomedical Science 2012, 19:36 (2 April 2012)

Abstract | Full text | PDF | PubMed

68.

Correction   Open Access

Correction: dehydratase mediated 1-propanol production in metabolically engineered Escherichia coli

Rachit Jain, Yajun Yan Microbial Cell Factories 2012, 11:38 (30 March 2012)

Abstract | Full text | PDF | PubMed

69.

Research article   Open Access

Identification of expressed resistance gene-like sequences by data mining in 454-derived transcriptomic sequences of common bean (Phaseolus vulgaris L.)

Zhanji Liu, Mollee Crampton, Antonette Todd, Venu Kalavacharla BMC Plant Biology 2012, 12:42 (23 March 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

70.

Research article   Open Access

Association analysis of photoperiodic flowering time genes in west and central African sorghum [Sorghum bicolor (L.) Moench]

Sankalp U Bhosale, Benjamin Stich, H Frederick W Rattunde, Eva Weltzien, Bettina IG Haussmann, C Thomas Hash, Punna Ramu, Hugo E Cuevas, Andrew H Paterson, Albrecht E Melchinger, Heiko K Parzies BMC Plant Biology 2012, 12:32 (7 March 2012)

Abstract | Full text | PDF | PubMed

71.

Research   Open Access

The relation between serum lipids and lutein and zeaxanthin in the serum and retina: results from cross-sectional, case-control and case study designs

Lisa M Renzi, Billy R Hammond, Melissa Dengler, Richard Roberts Lipids in Health and Disease 2012, 11:33 (29 February 2012)

Abstract | Full text | PDF | PubMed

72.

Research article   Open Access Highly Accessed

Parasitic wasp responses to symbiont-based defense in aphids

Kerry M Oliver, Koji Noge, Emma M Huang, Jaime M Campos, Judith X Becerra, Martha S Hunter BMC Biology 2012, 10:11 (24 February 2012)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Aphids are protected from parasitizing wasps by endosymbiotic bacteria that kill the wasp larvae, saving the lives of their hosts. But now it seems that wasps can detect the endosymbiotic bacteria and retaliate by laying more eggs, overcoming this defense.

73.

Research   Open Access Highly Accessed

Seroprevalence of Ehrlichia canis, Ehrlichia chaffeensis and Ehrlichia ewingii in dogs in North America

Melissa J Beall, A Rick Alleman, Ed B Breitschwerdt, Leah A Cohn, C Guillermo Couto, Michael W Dryden, Lynn C Guptill, Cristina Iazbik, Stephen A Kania, Patty Lathan, Susan E Little, Alma Roy, Katherine A Sayler, Brett A Stillman, Elizabeth G Welles, Wendy Wolfson, Michael J Yabsley Parasites & Vectors 2012, 5:29 (8 February 2012)

Abstract | Full text | PDF | PubMed |  Editor’s summary

The dog has been described as a sentinel for vector-borne infections. Serological results from dogs tested using Ehrlichia species-specific peptides revealed the geographic distribution of these organisms in the Eastern half of the U.S. and provided a gauge of the potential risk for human infection with these tick-transmitted pathogens. Image: Schematic of the study (courtesy of Lucienne Timblin)

74.

Research   Open Access

Biological conversion assay using Clostridium phytofermentans to estimate plant feedstock quality

Scott J Lee, Thomas A Warnick, Sivakumar Pattathil, Jesús G Alvelo-Maurosa, Michelle J Serapiglia, Heather McCormick, Virginia Brown, Naomi F Young, Danny J Schnell, Lawrence B Smart, Michael G Hahn, Jeffrey F Pedersen, Susan B Leschine, Samuel P Hazen Biotechnology for Biofuels 2012, 5:5 (8 February 2012)

Abstract | Full text | PDF | PubMed

75.

Open letter   Free Highly Accessed

Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes

John A St John, Edward L Braun, Sally R Isberg, Lee G Miles, Amanda Y Chong, Jaime Gongora, Pauline Dalzell, Christopher Moran, Bertrand Bed'Hom, Arkhat Abzhanov, Shane C Burgess, Amanda M Cooksey, Todd A Castoe, Nicholas G Crawford, Llewellyn D Densmore, Jennifer C Drew, Scott V Edwards, Brant C Faircloth, Matthew K Fujita, Matthew J Greenwold, Federico G Hoffmann, Jonathan M Howard, Taisen Iguchi, Daniel E Janes, Shahid Khan, Satomi Kohno, AP Jason de Koning, Stacey L Lance, Fiona M McCarthy, John E McCormack et al. Genome Biology 2012, 13:415 (31 January 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

An Open Letter describing the project to sequence the genomes of the saltwater crocodile, the American alligator and the Indian gharial

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