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	1.	Software ggbio: an R package for extending the grammar of graphics for genomic data Tengfei Yin, Dianne Cook, Michael Lawrence Genome Biology 2012, 13:R77 (31 August 2012) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary A consistent, robust and versatile software tool for visualizing genomic data
	2.	Research article A gene expression atlas of the domestic pig Tom C Freeman, Alasdair Ivens, J Kenneth Baillie, Dario Beraldi, Mark W Barnett, David Dorward, Alison Downing, Lynsey Fairbairn, Ronan Kapetanovic, Sobia Raza, Andru Tomoiu, Ramiro Alberio, Chunlei Wu, Andrew I Su, Kim M Summers, Christopher K Tuggle, Alan L Archibald, David A Hume BMC Biology 2012, 10:90 (15 November 2012) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary A genome-wide transcriptional analysis of over 60 tissues of the domestic pig identifies a network of transcription factors functioning in gastrointestinal development, as part of a collection of BioMed Central papers accompanying the publication of the pig genome in Nature.
	3.	Research *The transposable elements of the Drosophila melanogaster* euchromatin: a genomics perspective** Joshua S Kaminker, Casey M Bergman, Brent Kronmiller, Joseph Carlson, Robert Svirskas, Sandeep Patel, Erwin Frise, David A Wheeler, Suzanna E Lewis, Gerald M Rubin, Michael Ashburner, Susan E Celniker Genome Biology 2002, 3:research0084-0084.20 (23 December 2002) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary Using Release 3 of the euchromatic genomic sequence of Drosophila melanogaster, 85 known and eight novel families of transposable element have been identified, varying in copy number from one to 146. A total of 1,572 full and partial transposable elements were identified, comprising 3.86% of the sequence.
	4.	Research article *RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome* Andrew J Severin, Jenna L Woody, Yung-Tsi Bolon, Bindu Joseph, Brian W Diers, Andrew D Farmer, Gary J Muehlbauer, Rex T Nelson, David Grant, James E Specht, Michelle A Graham, Steven B Cannon, Gregory D May, Carroll P Vance, Randy C Shoemaker BMC Plant Biology 2010, 10:160 (5 August 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	5.	Short report Adenosine-5'-triphosphate (ATP) supplementation improves low peak muscle torque and torque fatigue during repeated high intensity exercise sets John A Rathmacher, John C Fuller, Shawn M Baier, Naji N Abumrad, Hector F Angus, Rick L Sharp Journal of the International Society of Sports Nutrition 2012, 9:48 (9 October 2012) Abstract \| Full text \| PDF \| PubMed
	6.	Research article Cnidarian phylogenetic relationships as revealed by mitogenomics Ehsan Kayal, Béatrice Roure, Hervé Philippe, Allen G Collins, Dennis V Lavrov BMC Evolutionary Biology 2013, 13:5 (9 January 2013) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary Re-evaluation of the phylogeny of the Cnidaria, using an expanded dataset of mitochondrial protein genes, differs from existing phylogeny and groups the Octocorallia and Medusozoa, resulting in a paraphyletic Anthozoa.
	7.	Research Accuracies of genomic breeding values in American Angus beef cattle using K-means clustering for cross-validation Mahdi Saatchi, Mathew C McClure, Stephanie D McKay, Megan M Rolf, JaeWoo Kim, Jared E Decker, Tasia M Taxis, Richard H Chapple, Holly R Ramey, Sally L Northcutt, Stewart Bauck, Brent Woodward, Jack CM Dekkers, Rohan L Fernando, Robert D Schnabel, Dorian J Garrick, Jeremy F Taylor Genetics Selection Evolution 2011, 43:40 (28 November 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	8.	Open letter *Sequencing the genome of the Burmese python (Python molurus bivittatus) as a model for studying extreme adaptations in snakes* Todd A Castoe, AP Jason de Koning, Kathryn T Hall, Ken D Yokoyama, Wanjun Gu, Eric N Smith, Cédric Feschotte, Peter Uetz, David A Ray, Jason Dobry, Robert Bogden, Stephen P Mackessy, Anne M Bronikowski, Wesley C Warren, Stephen M Secor, David D Pollock Genome Biology 2011, 12:406 (28 July 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary The genome of the Burmese python is being sequenced, providing insights into the unique anatomy, physiology, and evolution of snakes
	9.	Research article Development and implementation of high-throughput SNP genotyping in barley Timothy J Close, Prasanna R Bhat, Stefano Lonardi, Yonghui Wu, Nils Rostoks, Luke Ramsay, Arnis Druka, Nils Stein, Jan T Svensson, Steve Wanamaker, Serdar Bozdag, Mikeal L Roose, Matthew J Moscou, Shiaoman Chao, Rajeev K Varshney, Péter Szűcs, Kazuhiro Sato, Patrick M Hayes, David E Matthews, Andris Kleinhofs, Gary J Muehlbauer, Joseph DeYoung, David F Marshall, Kavitha Madishetty, Raymond D Fenton, Pascal Condamine, Andreas Graner, Robbie Waugh BMC Genomics 2009, 10:582 (4 December 2009) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary A high-density consensus genetic map of barley based only on complete and error-free datasets and genic markers, enables a high resolution comparison of barley and rice genomes and will aid marker-assisted breeding and association studies.
	10.	Research article Predicting RNA-Protein Interactions Using Only Sequence Information Usha K Muppirala, Vasant G Honavar, Drena Dobbs BMC Bioinformatics 2011, 12:489 (22 December 2011) Abstract \| Full text \| PDF \| PubMed
	11.	Research article Protein-RNA interface residue prediction using machine learning: an assessment of the state of the art Rasna R Walia, Cornelia Caragea, Benjamin A Lewis, Fadi Towfic, Michael Terribilini, Yasser El-Manzalawy, Drena Dobbs, Vasant Honavar BMC Bioinformatics 2012, 13:89 (10 May 2012) Abstract \| Full text \| PDF \| PubMed
	12.	Methodology article *A transcriptome map of perennial ryegrass (Lolium perenne* L.)** Bruno Studer, Stephen Byrne, Rasmus O Nielsen, Frank Panitz, Christian Bendixen, Md Islam, Matthias Pfeifer, Thomas Lübberstedt, Torben Asp BMC Genomics 2012, 13:140 (18 April 2012) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	13.	Study protocol SWITCH: rationale, design, and implementation of a community, school, and family-based intervention to modify behaviors related to childhood obesity Joey C Eisenmann, Douglas A Gentile, Gregory J Welk, Randi Callahan, Sarah Strickland, Monica Walsh, David A Walsh BMC Public Health 2008, 8:223 (29 June 2008) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	14.	Research article Evaluation of a multiple ecological level child obesity prevention program: Switch^® what you Do, View, and Chew Douglas A Gentile, Greg Welk, Joey C Eisenmann, Rachel A Reimer, David A Walsh, Daniel W Russell, Randi Callahan, Monica Walsh, Sarah Strickland, Katie Fritz BMC Medicine 2009, 7:49 (18 September 2009) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Editor’s summary The Switch program, which targets child obesity at community, family, school and individual levels, leads to moderate improvements in screen time and fruit and vegetable consumption, and offers promise as a strategy for prevention of youth obesity.
	15.	Research Dietary oil composition differentially modulates intestinal endotoxin transport and postprandial endotoxemia Venkatesh Mani, James H Hollis, Nicholas K Gabler Nutrition & Metabolism 2013, 10:6 (10 January 2013) Abstract \| Full text \| PDF \| PubMed
	16.	Research article High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence David L Hyten, Steven B Cannon, Qijian Song, Nathan Weeks, Edward W Fickus, Randy C Shoemaker, James E Specht, Andrew D Farmer, Gregory D May, Perry B Cregan BMC Genomics 2010, 11:38 (15 January 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	17.	Correspondence Pig genome sequence - analysis and publication strategy Alan L Archibald, Lars Bolund, Carol Churcher, Merete Fredholm, Martien AM Groenen, Barbara Harlizius, Kyung-Tai Lee, Denis Milan, Jane Rogers, Max F Rothschild, Hirohide Uenishi, Jun Wang, Lawrence B Schook, BMC Genomics 2010, 11:438 (19 July 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	18.	Research Deregressing estimated breeding values and weighting information for genomic regression analyses Dorian J Garrick, Jeremy F Taylor, Rohan L Fernando Genetics Selection Evolution 2009, 41:55 (31 December 2009) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	19.	Research Effects of low carbohydrate diets high in red meats or poultry, fish and shellfish on plasma lipids and weight loss Bridget A Cassady, Nicole L Charboneau, Emily E Brys, Kristin A Crouse, Donald C Beitz, Ted Wilson Nutrition & Metabolism 2007, 4:23 (31 October 2007) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	20.	Research article Extension of the bayesian alphabet for genomic selection David Habier, Rohan L Fernando, Kadir Kizilkaya, Dorian J Garrick BMC Bioinformatics 2011, 12:186 (23 May 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	21.	Research article *A draft physical map of a D-genome cotton species (Gossypium raimondii)* Lifeng Lin, Gary J Pierce, John E Bowers, James C Estill, Rosana O Compton, Lisa K Rainville, Changsoo Kim, Cornelia Lemke, Junkang Rong, Haibao Tang, Xiyin Wang, Michele Braidotti, Amy H Chen, Kristen Chicola, Kristi Collura, Ethan Epps, Wolfgang Golser, Corrinne Grover, Jennifer Ingles, Santhosh Karunakaran, Dave Kudrna, Jaime Olive, Nabila Tabassum, Eareana Um, Marina Wissotski, Yeisoo Yu, Andrea Zuccolo, Mehboob ur Rahman, Daniel G Peterson, Rod A Wing, Jonathan F Wendel, Andrew H Paterson et al. BMC Genomics 2010, 11:395 (22 June 2010) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	22.	Research article *Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae* pv. oryzae PXO99^A** Steven L Salzberg, Daniel D Sommer, Michael C Schatz, Adam M Phillippy, Pablo D Rabinowicz, Seiji Tsuge, Ayako Furutani, Hirokazu Ochiai, Arthur L Delcher, David Kelley, Ramana Madupu, Daniela Puiu, Diana Radune, Martin Shumway, Cole Trapnell, Gudlur Aparna, Gopaljee Jha, Alok Pandey, Prabhu B Patil, Hiromichi Ishihara, Damien F Meyer, Boris Szurek, Valerie Verdier, Ralf Koebnik, J Maxwell Dow, Robert P Ryan, Hisae Hirata, Shinji Tsuyumu, Sang Won Lee, Pamela C Ronald, Ramesh V Sonti, Marie-Anne Van Sluys, Jan E Leach, Frank F White, Adam J Bogdanove et al. BMC Genomics 2008, 9:204 (1 May 2008) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
	23.	Research article Pharmacokinetics and effect of intravenous meloxicam in weaned Holstein calves following scoop dehorning without local anesthesia Johann F Coetzee, Ruby A Mosher, Butch KuKanich, Ronette Gehring, Brad Robert, J Reinbold, Brad J White BMC Veterinary Research 2012, 8:153 (1 September 2012) Abstract \| Full text \| PDF \| PubMed \| Editor’s summary Calves treated with meloxicam, without local anesthetic, prior to dehorning demonstrate significantly lower plasma substance P concentrations alongside other markers for distress, demonstrating the potential for reducing pain perception using non-steroidal anti-inflammatory drugs.
	24.	Research article Deficiency of maize starch-branching enzyme i results in altered starch fine structure, decreased digestibility and reduced coleoptile growth during germination Huan Xia, Marna Yandeau-Nelson, Donald B Thompson, Mark J Guiltinan BMC Plant Biology 2011, 11:95 (21 May 2011) Abstract \| Full text \| PDF \| PubMed \| 1 comment
	25.	Software MetNet Online: a novel integrated resource for plant systems biology Yves Sucaet, Yi Wang, Jie Li, Eve Wurtele BMC Bioinformatics 2012, 13:267 (15 October 2012) Abstract \| Full text \| PDF \| PubMed