1.
VarBin, a novel method for classifying true and false positive variants in NGS data
Jacob
Durtschi,
Rebecca
L
Margraf,
Emily
M
Coonrod,
Kalyan
C
Mallempati,
Karl
V
Voelkerding
BMC Bioinformatics 2013, 14 (Suppl 13):S2 (1 October 2013)
Abstract | Full text | PDF
2.
Genomic pathway analysis reveals that EZH2 and HDAC4 represent mutually exclusive epigenetic pathways across human cancers
Adam
L
Cohen,
Stephen
R
Piccolo,
Luis
Cheng,
Rafaella
Soldi,
Bing
Han,
W
Evan
Johnson,
Andrea
H
Bild
BMC Medical Genomics 2013, 6 :35 (30 September 2013)
Abstract | Provisional PDF
| PubMed
3.
Whirlin, a cytoskeletal scaffolding protein, stabilizes the paranodal region and axonal cytoskeleton in myelinated axons
James
A
Green,
Jun
Yang,
M’hamed
Grati,
Bechara
Kachar,
Manzoor
A
Bhat
BMC Neuroscience 2013, 14 :96 (6 September 2013)
Abstract | Full text | PDF | PubMed
4.
Challenges in implementing The Institute of Medicine systematic review standards
Stephanie
M
Chang,
Eric
B
Bass,
Nancy
Berkman,
Timothy
S
Carey,
Robert
L
Kane,
Joseph
Lau,
Sara
Ratichek
Systematic Reviews 2013, 2 :69 (27 August 2013)
Abstract | Full text | PDF | PubMed
5.
HIV latency and integration site placement in five cell-based models
Scott
Sherrill-Mix,
Mary
K
Lewinski,
Marylinda
Famiglietti,
Alberto
Bosque,
Nirav
Malani,
Karen
E
Ocwieja,
Charles
C
Berry,
David
Looney,
Liang
Shan,
Luis
M
Agosto,
Matthew
J
Pace,
Robert
F
Siliciano,
Una
O’Doherty,
John
Guatelli,
Vicente
Planelles,
Frederic
D
Bushman
Retrovirology 2013, 10 :90 (16 August 2013)
Abstract | Full text | PDF | PubMed
6.
Histone deacetylases 1 and 2 maintain S-phase chromatin and DNA replication fork progression
Srividya
Bhaskara,
Vincent
Jacques,
James
R
Rusche,
Eric
N
Olson,
Bradley
R
Cairns,
Mahesh
B
Chandrasekharan
Epigenetics & Chromatin 2013, 6 :27 (15 August 2013)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
Srividya Bhaskara et al. describe an important role of histone deacetylases 1 and 2 in regulating SMARCA5 to maintain genome stability and DNA replication fork progression.
7.
Phenotypic selection of a wild Saccharomyces cerevisiae strain for simultaneous saccharification and co-fermentation of AFEX™ pretreated corn stover
Mingjie
Jin,
Cory
Sarks,
Christa
Gunawan,
Benjamin
D
Bice,
Shane
P
Simonett,
Ragothaman
Avanasi Narasimhan,
Laura
B
Willis,
Bruce
E
Dale,
Venkatesh
Balan,
Trey
K
Sato
Biotechnology for Biofuels 2013, 6 :108 (27 July 2013)
Abstract | Full text | PDF | PubMed
8.
Microarray characterization of gene expression changes in blood during acute ethanol exposure
Doris
M
Kupfer,
Vicky
L
White,
David
L
Strayer,
Dennis
J
Crouch,
Dennis
Burian
BMC Medical Genomics 2013, 6 :26 (25 July 2013)
Abstract | Full text | PDF | PubMed
9.
Development of a screen to identify selective small molecules active against patient-derived metastatic and chemoresistant breast cancer cells
Keith
M
Gligorich,
Rachel
M
Vaden,
Dawne
N
Shelton,
Guoying
Wang,
Cindy
B
Matsen,
Ryan
E
Looper,
Matthew
S
Sigman,
Bryan
E
Welm
Breast Cancer Research 2013, 15 :R58 (23 July 2013)
Abstract | Provisional PDF
| PubMed
10.
Patient and provider attitudes toward genomic testing for prostate cancer susceptibility: a mixed method study
Wendy
C
Birmingham,
Neeraj
Agarwal,
Wendy
Kohlmann,
Lisa
G
Aspinwall,
Mary
Wang,
Jay
Bishoff,
Christopher
Dechet,
Anita
Y
Kinney
BMC Health Services Research 2013, 13 :279 (20 July 2013)
Abstract | Full text | PDF | PubMed
11.
A longitudinal study of CPAP therapy for patients with chronic cough and obstructive sleep apnoea
Krishna
M
Sundar,
Sarah
E
Daly,
Alika
M
Willis
Cough 2013, 9 :19 (11 July 2013)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
In a single-center study, 68% of patients presenting with idiopathic chronic cough also had obstructive sleep apnea (OSA) and following continuous positive airway pressure therapy both OSA and chronic cough status improved, providing further evidence for a link between the two conditions.
12.
Effects of icosapent ethyl on lipid and inflammatory parameters in patients with diabetes mellitus-2, residual elevated triglycerides (200–500 mg/dL), and on statin therapy at LDL-C goal: the ANCHOR study
Eliot
A
Brinton,
Christie
M
Ballantyne,
Harold
E
Bays,
John
J
Kastelein,
Rene
A
Braeckman,
Paresh
N
Soni
Cardiovascular Diabetology 2013, 12 :100 (9 July 2013)
Abstract | Full text | PDF | PubMed
13.
Influence of intrinsic and synaptic properties on transmission of spike timing precision
Heather
A
Brooks,
Alla
Borisyuk
BMC Neuroscience 2013, 14 (Suppl 1):P31 (8 July 2013)
Full text | PDF
14.
Development and validation of a predictive model of acute glucose response to exercise in individuals with type 2 diabetes
Bryan
S
Gibson,
Sheri
R
Colberg,
Paul
Poirier,
Denise
Vancea,
Jason
Jones,
Robin
Marcus
Diabetology & Metabolic Syndrome 2013, 5 :33 (1 July 2013)
Abstract | Full text | PDF | PubMed
15.
Focused ultrasound-mediated drug delivery to pancreatic cancer in a mouse model
Natalya
Rapoport,
Allison
Payne,
Christopher
Dillon,
Jill
Shea,
Courtney
Scaife,
Roohi
Gupta
Journal of Therapeutic Ultrasound 2013, 1 :11 (1 July 2013)
Abstract | Full text | PDF
16.
COMPLEXO: identifying the missing heritability of breast cancer via next generation collaboration
Melissa
C
Southey,
Daniel
J
Park,
Tu
Nguyen-Dumont,
Ian
Campbell,
Ella
Thompson,
Alison
H
Trainer,
Georgia
Chenevix-Trench,
Jacques
Simard,
Martine
Dumont,
Penny
Soucy,
Mads
Thomassen,
Lars
Jønson,
Inge
S
Pedersen,
Thomas
VO
Hansen,
Heli
Nevanlinna,
Sofia
Khan,
Olga
Sinilnikova,
Sylvie
Mazoyer,
Fabienne
Lesueur,
Francesca
Damiola,
Rita
Schmutzler,
Alfons
Meindl,
Eric
Hahnen,
Michael
R
Dufault,
TL
Chris Chan,
Ava
Kwong,
Rosa
Barkardóttir,
Paolo
Radice,
Paolo
Peterlongo
et al.
Breast Cancer Research 2013, 15 :402 (21 June 2013)
Abstract | Full text | PDF | PubMed
17.
Intracavernous administration of bone marrow mononuclear cells: a new method of treating erectile dysfunction?
Thomas
E
Ichim,
Timothy
Warbington,
Octav
Cristea,
Joseph
L
Chin,
Amit
N
Patel
Journal of Translational Medicine 2013, 11 :139 (9 June 2013)
Abstract | Full text | PDF | PubMed
18.
Evaluating the cognitive effects of donepezil 23 mg/d in moderate and severe Alzheimer’s disease: analysis of effects of baseline features on treatment response
Marwan
Sabbagh,
Jeffrey
Cummings,
Daniel
Christensen,
Rachelle
Doody,
Martin
Farlow,
Liang
Liu,
Joan
Mackell,
Randi
Fain
BMC Geriatrics 2013, 13 :56 (6 June 2013)
Abstract | Full text | PDF | PubMed
19.
Phylogenetic analysis of symbionts in feather-feeding lice of the genus Columbicola : evidence for repeated symbiont replacements
Wendy
A
Smith,
Kelly
F
Oakeson,
Kevin
P
Johnson,
David
L
Reed,
Tamar
Carter,
Kari
L
Smith,
Ryuichi
Koga,
Takema
Fukatsu,
Dale
H
Clayton,
Colin
Dale
BMC Evolutionary Biology 2013, 13 :109 (31 May 2013)
Abstract | Full text | PDF | PubMed
20.
Tardive and spontaneous dyskinesia incidence in the general population
Ray
M
Merrill,
Joseph
L
Lyon,
Paul
M
Matiaco
BMC Psychiatry 2013, 13 :152 (28 May 2013)
Abstract | Full text | PDF | PubMed
21.
Interactions by 2D Gel Electrophoresis Overlap (iGEO): a novel high fidelity
approach to identify constituents of protein complexes
Masaaki
Yoshigi,
Stephen
M
Pronovost,
Julie
L
Kadrmas
Proteome Science 2013, 11 :21 (12 May 2013)
Abstract | Full text | PDF | PubMed
22.
A burst of ABC genes in the genome of the polyphagous spider mite Tetranychus urticae
Wannes
Dermauw,
Edward
Osborne,
Richard
M
Clark,
Miodrag
Grbić,
Luc
Tirry,
Thomas
Van Leeuwen
BMC Genomics 2013, 14 :317 (10 May 2013)
Abstract | Full text | PDF | PubMed
23.
Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.)
Ray
Ming,
Robert
VanBuren,
Yanling
Liu,
Mei
Yang,
Yuepeng
Han,
Lei-Ting
Li,
Qiong
Zhang,
Min-Jeong
Kim,
Michael
C
Schatz,
Michael
Campbell,
Jingping
Li,
John
E
Bowers,
Haibao
Tang,
Eric
Lyons,
Ann
A
Ferguson,
Giuseppe
Narzisi,
David
R
Nelson,
Crysten
E
Blaby-Haas,
Andrea
R
Gschwend,
Yuannian
Jiao,
Joshua
P
Der,
Fanchang
Zeng,
Jennifer
Han,
Xiang
Min,
Karen
A
Hudson,
Ratnesh
Singh,
Aleel
K
Grennan,
Steven
J
Karpowicz,
Jennifer
R
Watling,
Kikukatsu
Ito
et al.
Genome Biology 2013, 14 :R41 (10 May 2013)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central | f1000
|
Editor’s summary
The genome of the long-living, slowly evolving sacred lotus reveals the genetic mechanisms underlying its adaptation to limited nutrient availability
24.
Examining the challenges of family recruitment to behavioral intervention trials: factors associated with participation and enrollment in a multi-state colonoscopy intervention trial
Rebecca
G
Simmons,
Yuan-Chin Amy
Lee,
Antoinette
M
Stroup,
Sandra
L
Edwards,
Amy
Rogers,
Christopher
Johnson,
Charles
L
Wiggins,
Deirdre
A
Hill,
Rosemary
D
Cress,
Jan
Lowery,
Scott
T
Walters,
Kory
Jasperson,
John
C
Higginbotham,
Marc
S
Williams,
Randall
W
Burt,
Marc
D
Schwartz,
Anita
Y
Kinney
Trials 2013, 14 :116 (30 April 2013)
Abstract | Full text | PDF | PubMed
25.
A new ratio for better predicting future death/myocardial infarction than standard lipid measurements in women >50 years undergoing coronary angiography: the apolipoprotein A1 remnant ratio (Apo A1/ [VLDL3 +IDL])
Heidi
T
May,
John
R
Nelson,
Krishnaji
R
Kulkarni,
Jeffrey
L
Anderson,
Benjamin
D
Horne,
Tami
L
Bair,
Joseph
B
Muhlestein
Lipids in Health and Disease 2013, 12 :55 (26 April 2013)
Abstract | Full text | PDF | PubMed